RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 ONECUT1Q9UBC0 465 aa9.72□□□□□ -0.85
BRCA1-225ENST00000586385 FBLN5Q9UBX5 448 aa9.72□□□□□ -0.85
BRCA1-225ENST00000586385 FOXJ3Q9UPW0 622 aa9.72□□□□□ -0.85
BRCA1-225ENST00000586385 AURKCQ9UQB9 309 aa9.72□□□□□ -0.85
BRCA1-225ENST00000586385 NOP16Q9Y3C1 178 aaKnown RBP9.72□□□□□ -0.85
BRCA1-225ENST00000586385 FAM96BQ9Y3D0 163 aa9.72□□□□□ -0.85
BRCA1-225ENST00000586385 CAPN7Q9Y6W3 813 aa9.72□□□□□ -0.85
BRCA1-225ENST00000586385 hCG_1807616A0A1W2PRN6 198 aa9.71□□□□□ -0.86
BRCA1-225ENST00000586385 TVP23AA6NH52 213 aa9.71□□□□□ -0.86
BRCA1-225ENST00000586385 GPR37O15354 613 aa9.71□□□□□ -0.86
BRCA1-225ENST00000586385 ALX3O95076 343 aa9.71□□□□□ -0.86
BRCA1-225ENST00000586385 RENP00797 406 aa9.71□□□□□ -0.86
BRCA1-225ENST00000586385 SLC6A6P31641 620 aa9.71□□□□□ -0.86
BRCA1-225ENST00000586385 HERPUD1Q15011 391 aa9.71□□□□□ -0.86
BRCA1-225ENST00000586385 KLHL12Q53G59 568 aa9.71□□□□□ -0.86
BRCA1-225ENST00000586385 SLC35F1Q5T1Q4 408 aa9.71□□□□□ -0.86
BRCA1-225ENST00000586385 CRIP3Q6Q6R5 217 aa9.71□□□□□ -0.86
BRCA1-225ENST00000586385 DRAM2Q6UX65 266 aa9.71□□□□□ -0.86
BRCA1-225ENST00000586385 WDR82Q6UXN9 313 aa9.71□□□□□ -0.86
BRCA1-225ENST00000586385 C1orf122Q6ZSJ8 110 aa9.71□□□□□ -0.86
BRCA1-225ENST00000586385 ARPINQ7Z6K5 226 aa9.71□□□□□ -0.86
BRCA1-225ENST00000586385 LNX2Q8N448 690 aa9.71□□□□□ -0.86
BRCA1-225ENST00000586385 C11orf44Q8N8P7 122 aa9.71□□□□□ -0.86
BRCA1-225ENST00000586385 SPERTQ8NA61 448 aa9.71□□□□□ -0.86
BRCA1-225ENST00000586385 OR1M1Q8NGA1 313 aa9.71□□□□□ -0.86
BRCA1-225ENST00000586385 C8orf46Q8TAG6 207 aa9.71□□□□□ -0.86
BRCA1-225ENST00000586385 NPRL2Q8WTW4 380 aa9.71□□□□□ -0.86
BRCA1-225ENST00000586385 DCTN5Q9BTE1 182 aa9.71□□□□□ -0.86
BRCA1-225ENST00000586385 RNPEPL1Q9HAU8 725 aa9.71□□□□□ -0.86
BRCA1-225ENST00000586385 KCNG2Q9UJ96 466 aa9.71□□□□□ -0.86
BRCA1-225ENST00000586385 PRPF19Q9UMS4 504 aaKnown RBP9.71□□□□□ -0.86
BRCA1-225ENST00000586385 AP3M1Q9Y2T2 418 aa9.71□□□□□ -0.86
BRCA1-225ENST00000586385 KMT2CQ8NEZ4 4911 aaKnown RBP9.71□□□□□ -0.86
BRCA1-225ENST00000586385 BHLHE40O14503 412 aa9.7□□□□□ -0.86
BRCA1-225ENST00000586385 GSTA4O15217 222 aa9.7□□□□□ -0.86
BRCA1-225ENST00000586385 HLA-DQA2P01906 255 aa9.7□□□□□ -0.86
BRCA1-225ENST00000586385 SEMG1P04279 462 aa9.7□□□□□ -0.86
BRCA1-225ENST00000586385 TROVE2P10155 538 aaKnown RBP eCLIP9.7□□□□□ -0.86
BRCA1-225ENST00000586385 MUC1P15941 1255 aaPredicted RBP9.7□□□□□ -0.86
BRCA1-225ENST00000586385 NOS3P29474 1203 aa9.7□□□□□ -0.86
BRCA1-225ENST00000586385 GABRA5P31644 462 aa9.7□□□□□ -0.86
BRCA1-225ENST00000586385 GSSP48637 474 aa9.7□□□□□ -0.86
BRCA1-225ENST00000586385 PRKXP51817 358 aa9.7□□□□□ -0.86
BRCA1-225ENST00000586385 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.7□□□□□ -0.86
BRCA1-225ENST00000586385 IKZF1Q13422 519 aa9.7□□□□□ -0.86
BRCA1-225ENST00000586385 FAM189A2Q15884 450 aa9.7□□□□□ -0.86
BRCA1-225ENST00000586385 ATPAF1Q5TC12 328 aaPredicted RBP9.7□□□□□ -0.86
BRCA1-225ENST00000586385 STUMQ69YW2 141 aa9.7□□□□□ -0.86
BRCA1-225ENST00000586385 CYB561A3Q8NBI2 242 aa9.7□□□□□ -0.86
BRCA1-225ENST00000586385 OR5T2Q8NGG2 359 aa9.7□□□□□ -0.86
BRCA1-225ENST00000586385 SPTSSAQ969W0 71 aa9.7□□□□□ -0.86
BRCA1-225ENST00000586385 FAM162AQ96A26 154 aa9.7□□□□□ -0.86
BRCA1-225ENST00000586385 ITPKCQ96DU7 683 aa9.7□□□□□ -0.86
BRCA1-225ENST00000586385 DMRTB1Q96MA1 342 aa9.7□□□□□ -0.86
BRCA1-225ENST00000586385 IFT27Q9BW83 186 aa9.7□□□□□ -0.86
BRCA1-225ENST00000586385 FGF23Q9GZV9 251 aaPredicted RBP9.7□□□□□ -0.86
BRCA1-225ENST00000586385 TLNRD1Q9H1K6 362 aa9.7□□□□□ -0.86
BRCA1-225ENST00000586385 WDR13Q9H1Z4 485 aa9.7□□□□□ -0.86
BRCA1-225ENST00000586385 TOR3AQ9H497 397 aa9.7□□□□□ -0.86
BRCA1-225ENST00000586385 DCAF13Q9NV06 445 aaKnown RBP9.7□□□□□ -0.86
BRCA1-225ENST00000586385 MRGBPQ9NV56 204 aa9.7□□□□□ -0.86
BRCA1-225ENST00000586385 COMMD3-BMI1R4GMX3 469 aa9.7□□□□□ -0.86
BRCA1-225ENST00000586385 DNAH3Q8TD57 4116 aa9.69□□□□□ -0.86
BRCA1-225ENST00000586385 H3BUX3 64 aa9.69□□□□□ -0.86
BRCA1-225ENST00000586385 SLC22A2O15244 555 aa9.69□□□□□ -0.86
BRCA1-225ENST00000586385 PIN1P1O15428 100 aa9.69□□□□□ -0.86
BRCA1-225ENST00000586385 PLXNB1O43157 2135 aa9.69□□□□□ -0.86
BRCA1-225ENST00000586385 COX4I1P13073 169 aa9.69□□□□□ -0.86
BRCA1-225ENST00000586385 PAX6P26367 422 aa9.69□□□□□ -0.86
BRCA1-225ENST00000586385 FAM3AP98173 230 aa9.69□□□□□ -0.86
BRCA1-225ENST00000586385 DGUOKQ16854 277 aa9.69□□□□□ -0.86
BRCA1-225ENST00000586385 MICBQ29980 383 aa9.69□□□□□ -0.86
BRCA1-225ENST00000586385 OXLD1Q5BKU9 147 aa9.69□□□□□ -0.86
BRCA1-225ENST00000586385 SLC16A9Q7RTY1 509 aa9.69□□□□□ -0.86
BRCA1-225ENST00000586385 PRSS45Q7RTY3 260 aa9.69□□□□□ -0.86
BRCA1-225ENST00000586385 DCXRQ7Z4W1 244 aa9.69□□□□□ -0.86
BRCA1-225ENST00000586385 ZDHHC21Q8IVQ6 265 aa9.69□□□□□ -0.86
BRCA1-225ENST00000586385 GALNT4Q8N4A0 578 aa9.69□□□□□ -0.86
BRCA1-225ENST00000586385 BEND2Q8NDZ0 799 aa9.69□□□□□ -0.86
BRCA1-225ENST00000586385 OR51L1Q8NGJ5 315 aa9.69□□□□□ -0.86
BRCA1-225ENST00000586385 OR5R1Q8NH85 324 aa9.69□□□□□ -0.86
BRCA1-225ENST00000586385 RP9Q8TA86 221 aaKnown RBP9.69□□□□□ -0.86
BRCA1-225ENST00000586385 RORBQ92753 470 aa9.69□□□□□ -0.86
BRCA1-225ENST00000586385 C14orf119Q9NWQ9 140 aa9.69□□□□□ -0.86
BRCA1-225ENST00000586385 ZNF319Q9P2F9 582 aa9.69□□□□□ -0.86
BRCA1-225ENST00000586385 ABCD2Q9UBJ2 740 aa9.69□□□□□ -0.86
BRCA1-225ENST00000586385 FAM32AQ9Y421 112 aaKnown RBP9.69□□□□□ -0.86
BRCA1-225ENST00000586385 TET2Q6N021 2002 aaPredicted RBP9.68□□□□□ -0.86
BRCA1-225ENST00000586385 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.68□□□□□ -0.86
BRCA1-225ENST00000586385 hCG_38984A0A1B0GV85 526 aa9.68□□□□□ -0.86
BRCA1-225ENST00000586385 MEIOCA2RUB1 952 aa9.68□□□□□ -0.86
BRCA1-225ENST00000586385 BTBD17A6NE02 478 aa9.68□□□□□ -0.86
BRCA1-225ENST00000586385 CDIPTO14735 213 aa9.68□□□□□ -0.86
BRCA1-225ENST00000586385 IDH3BO43837 385 aa9.68□□□□□ -0.86
BRCA1-225ENST00000586385 CHST1O43916 411 aa9.68□□□□□ -0.86
BRCA1-225ENST00000586385 KIR2DS4P43632 304 aa9.68□□□□□ -0.86
BRCA1-225ENST00000586385 UBE2E1P51965 193 aa9.68□□□□□ -0.86
BRCA1-225ENST00000586385 MXRA7P84157 204 aa9.68□□□□□ -0.86
BRCA1-225ENST00000586385 GUCA2AQ02747 115 aa9.68□□□□□ -0.86
BRCA1-225ENST00000586385 Q6ZTK2 550 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms