RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	PCK2	Q16822	640 aa		12.5	□□□□□ -0.41
SREBF1-222	ENST00000583732	HSP90B2P	Q58FF3	399 aa		12.5	□□□□□ -0.41
SREBF1-222	ENST00000583732	RHOU	Q7L0Q8	258 aa		12.5	□□□□□ -0.41
SREBF1-222	ENST00000583732	VMO1	Q7Z5L0	202 aa		12.5	□□□□□ -0.41
SREBF1-222	ENST00000583732	WDR86	Q86TI4	376 aa		12.5	□□□□□ -0.41
SREBF1-222	ENST00000583732	SPERT	Q8NA61	448 aa		12.5	□□□□□ -0.41
SREBF1-222	ENST00000583732	PLPP7	Q8NBV4	271 aa		12.5	□□□□□ -0.41
SREBF1-222	ENST00000583732	DYRK2	Q92630	601 aa		12.5	□□□□□ -0.41
SREBF1-222	ENST00000583732	UBE2F	Q969M7	185 aa		12.5	□□□□□ -0.41
SREBF1-222	ENST00000583732	CCL13	Q99616	98 aa		12.5	□□□□□ -0.41
SREBF1-222	ENST00000583732	KCNJ15	Q99712	375 aa		12.5	□□□□□ -0.41
SREBF1-222	ENST00000583732	BTBD10	Q9BSF8	475 aa		12.5	□□□□□ -0.41
SREBF1-222	ENST00000583732	C14orf119	Q9NWQ9	140 aa		12.5	□□□□□ -0.41
SREBF1-222	ENST00000583732		A0A1W2PRD5	423 aa		12.49	□□□□□ -0.41
SREBF1-222	ENST00000583732		A0A1W2PRF3	423 aa		12.49	□□□□□ -0.41
SREBF1-222	ENST00000583732		A0A1W2PRM7	423 aa		12.49	□□□□□ -0.41
SREBF1-222	ENST00000583732	ANKRD30BL	A7E2S9	258 aa		12.49	□□□□□ -0.41
SREBF1-222	ENST00000583732	ZNF878	C9JN71	531 aa		12.49	□□□□□ -0.41
SREBF1-222	ENST00000583732	TIMM23	O14925	209 aa		12.49	□□□□□ -0.41
SREBF1-222	ENST00000583732	XRCC2	O43543	280 aa		12.49	□□□□□ -0.41
SREBF1-222	ENST00000583732	CLU	P10909	449 aa		12.49	□□□□□ -0.41
SREBF1-222	ENST00000583732	FMO3	P31513	532 aa		12.49	□□□□□ -0.41
SREBF1-222	ENST00000583732	CX3CR1	P49238	355 aa		12.49	□□□□□ -0.41
SREBF1-222	ENST00000583732	GMFB	P60983	142 aa		12.49	□□□□□ -0.41
SREBF1-222	ENST00000583732	MZT1	Q08AG7	82 aa		12.49	□□□□□ -0.41
SREBF1-222	ENST00000583732	PPP1R8	Q12972	351 aa	Known RBP	12.49	□□□□□ -0.41
SREBF1-222	ENST00000583732	CRMP1	Q14194	572 aa		12.49	□□□□□ -0.41
SREBF1-222	ENST00000583732	TIGD6	Q17RP2	521 aa		12.49	□□□□□ -0.41
SREBF1-222	ENST00000583732	GFOD2	Q3B7J2	385 aa		12.49	□□□□□ -0.41
SREBF1-222	ENST00000583732	WDR38	Q5JTN6	314 aa		12.49	□□□□□ -0.41
SREBF1-222	ENST00000583732	TEX36	Q5VZQ5	186 aa		12.49	□□□□□ -0.41
SREBF1-222	ENST00000583732	DPY19L4	Q7Z388	723 aa		12.49	□□□□□ -0.41
SREBF1-222	ENST00000583732	FAM216B	Q8N7L0	139 aa		12.49	□□□□□ -0.41
SREBF1-222	ENST00000583732	OR6K6	Q8NGW6	343 aa		12.49	□□□□□ -0.41
SREBF1-222	ENST00000583732	LINC01006	Q8NI28	216 aa		12.49	□□□□□ -0.41
SREBF1-222	ENST00000583732	SEH1L	Q96EE3	360 aa		12.49	□□□□□ -0.41
SREBF1-222	ENST00000583732	DDO	Q99489	341 aa		12.49	□□□□□ -0.41
SREBF1-222	ENST00000583732	MMP27	Q9H306	513 aa		12.49	□□□□□ -0.41
SREBF1-222	ENST00000583732	PPP1R3E	Q9H7J1	279 aa		12.49	□□□□□ -0.41
SREBF1-222	ENST00000583732	SIRT7	Q9NRC8	400 aa		12.49	□□□□□ -0.41
SREBF1-222	ENST00000583732	DNAJC27	Q9NZQ0	273 aa		12.49	□□□□□ -0.41
SREBF1-222	ENST00000583732	RPUSD1	Q9UJJ7	312 aa	Known RBP	12.49	□□□□□ -0.41
SREBF1-222	ENST00000583732	TNFRSF11B	O00300	401 aa		12.48	□□□□□ -0.41
SREBF1-222	ENST00000583732	ZNF593	O00488	134 aa	Predicted RBP	12.48	□□□□□ -0.41
SREBF1-222	ENST00000583732	LHB	P01229	141 aa		12.48	□□□□□ -0.41
SREBF1-222	ENST00000583732	HSD17B1	P14061	328 aa		12.48	□□□□□ -0.41
SREBF1-222	ENST00000583732	HSD11B1	P28845	292 aa		12.48	□□□□□ -0.41
SREBF1-222	ENST00000583732	IER3	P46695	156 aa		12.48	□□□□□ -0.41
SREBF1-222	ENST00000583732	DLX1	P56177	255 aa		12.48	□□□□□ -0.41
SREBF1-222	ENST00000583732	IKZF1	Q13422	519 aa		12.48	□□□□□ -0.41
SREBF1-222	ENST00000583732	EIF2B1	Q14232	305 aa	Known RBP	12.48	□□□□□ -0.41
SREBF1-222	ENST00000583732	SAMD4B	Q5PRF9	694 aa	Known RBP	12.48	□□□□□ -0.41
SREBF1-222	ENST00000583732	ASPHD2	Q6ICH7	369 aa		12.48	□□□□□ -0.41
SREBF1-222	ENST00000583732	RPL13AP3	Q6NVV1	102 aa		12.48	□□□□□ -0.41
SREBF1-222	ENST00000583732	SLC16A9	Q7RTY1	509 aa		12.48	□□□□□ -0.41
SREBF1-222	ENST00000583732	LDLRAD3	Q86YD5	345 aa		12.48	□□□□□ -0.41
SREBF1-222	ENST00000583732	PIP4P2	Q8N4L2	257 aa		12.48	□□□□□ -0.41
SREBF1-222	ENST00000583732	OR4Q3	Q8NH05	313 aa		12.48	□□□□□ -0.41
SREBF1-222	ENST00000583732	REEP6	Q96HR9	211 aa		12.48	□□□□□ -0.41
SREBF1-222	ENST00000583732	PKP2	Q99959	881 aa		12.48	□□□□□ -0.41
SREBF1-222	ENST00000583732	RBM4B	Q9BQ04	359 aa	Known RBP	12.48	□□□□□ -0.41
SREBF1-222	ENST00000583732	TSSK6	Q9BXA6	273 aa		12.48	□□□□□ -0.41
SREBF1-222	ENST00000583732	OPA3	Q9H6K4	179 aa		12.48	□□□□□ -0.41
SREBF1-222	ENST00000583732	CNTD2	Q9H8S5	307 aa		12.48	□□□□□ -0.41
SREBF1-222	ENST00000583732	IL1RAP	Q9NPH3	570 aa		12.48	□□□□□ -0.41
SREBF1-222	ENST00000583732	ARMC1	Q9NVT9	282 aa		12.48	□□□□□ -0.41
SREBF1-222	ENST00000583732	FAM96B	Q9Y3D0	163 aa		12.48	□□□□□ -0.41
SREBF1-222	ENST00000583732	LYVE1	Q9Y5Y7	322 aa		12.48	□□□□□ -0.41
SREBF1-222	ENST00000583732	PRKDC	P78527	4128 aa	Known RBP	12.47	□□□□□ -0.41
SREBF1-222	ENST00000583732	ACOT8	O14734	319 aa		12.47	□□□□□ -0.41
SREBF1-222	ENST00000583732	SOX14	O95416	240 aa		12.47	□□□□□ -0.41
SREBF1-222	ENST00000583732	TSPAN15	O95858	294 aa		12.47	□□□□□ -0.41
SREBF1-222	ENST00000583732	ECD	O95905	644 aa	Predicted RBP	12.47	□□□□□ -0.41
SREBF1-222	ENST00000583732	GAST	P01350	101 aa		12.47	□□□□□ -0.41
SREBF1-222	ENST00000583732	SELL	P14151	372 aa		12.47	□□□□□ -0.41
SREBF1-222	ENST00000583732	SPI1	P17947	270 aa		12.47	□□□□□ -0.41
SREBF1-222	ENST00000583732	GRK5	P34947	590 aa		12.47	□□□□□ -0.41
SREBF1-222	ENST00000583732	FAM3A	P98173	230 aa		12.47	□□□□□ -0.41
SREBF1-222	ENST00000583732	KLRD1	Q13241	179 aa		12.47	□□□□□ -0.41
SREBF1-222	ENST00000583732	MICB	Q29980	383 aa		12.47	□□□□□ -0.41
SREBF1-222	ENST00000583732	CDON	Q4KMG0	1287 aa		12.47	□□□□□ -0.41
SREBF1-222	ENST00000583732	CYP2R1	Q6VVX0	501 aa		12.47	□□□□□ -0.41
SREBF1-222	ENST00000583732		Q6ZSV7	163 aa		12.47	□□□□□ -0.41
SREBF1-222	ENST00000583732	FAM57B	Q71RH2	274 aa		12.47	□□□□□ -0.41
SREBF1-222	ENST00000583732	C11orf53	Q8IXP5	236 aa		12.47	□□□□□ -0.41
SREBF1-222	ENST00000583732	PGAM4	Q8N0Y7	254 aa		12.47	□□□□□ -0.41
SREBF1-222	ENST00000583732	OR1M1	Q8NGA1	313 aa		12.47	□□□□□ -0.41
SREBF1-222	ENST00000583732	CDRT15	Q96T59	188 aa		12.47	□□□□□ -0.41
SREBF1-222	ENST00000583732	TCF7L1	Q9HCS4	588 aa		12.47	□□□□□ -0.41
SREBF1-222	ENST00000583732	BRD7	Q9NPI1	651 aa		12.47	□□□□□ -0.41
SREBF1-222	ENST00000583732	KAAG1	Q9UBP8	84 aa		12.47	□□□□□ -0.41
SREBF1-222	ENST00000583732	KPTN	Q9Y664	436 aa		12.47	□□□□□ -0.41
SREBF1-222	ENST00000583732	VWF	P04275	2813 aa		12.47	□□□□□ -0.41
SREBF1-222	ENST00000583732	TG	P01266	2768 aa		12.46	□□□□□ -0.41
SREBF1-222	ENST00000583732		A0A1B0GVI7	797 aa		12.46	□□□□□ -0.41
SREBF1-222	ENST00000583732	DHRS12	A0PJE2	317 aa		12.46	□□□□□ -0.41
SREBF1-222	ENST00000583732	CCNB2	O95067	398 aa		12.46	□□□□□ -0.41
SREBF1-222	ENST00000583732	TFF1	P04155	84 aa		12.46	□□□□□ -0.41
SREBF1-222	ENST00000583732	DDOST	P39656	456 aa		12.46	□□□□□ -0.41
SREBF1-222	ENST00000583732	PROK1	P58294	105 aa		12.46	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms