RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 PAX5Q02548 391 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 GLO1Q04760 184 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 CD47Q08722 323 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 KYAT1Q16773 422 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 HNRNPA1L2Q32P51 320 aaKnown RBP3.95□□□□□ -1.78
SS18-223ENST00000583595 ZNF672Q499Z4 452 aaPredicted RBP3.95□□□□□ -1.78
SS18-223ENST00000583595 C14orf28Q4W4Y0 310 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 SOHLH1Q5JUK2 328 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 TMEM31Q5JXX7 168 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 DNLZQ5SXM8 178 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 FAM182AQ5T1J6 154 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 AVPI1Q5T686 147 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 STPG1Q5TH74 334 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 ZNF691Q5VV52 312 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 ANKRD22Q5VYY1 191 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 GLYATQ6IB77 296 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 RPL13AP3Q6NVV1 102 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 TMPRSS11AQ6ZMR5 421 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 GDPGP1Q6ZNW5 385 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 VTCN1Q7Z7D3 282 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 DPPA2Q7Z7J5 298 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 VRK2Q86Y07 508 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 C10orf107Q8IVU9 208 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 AQP11Q8NBQ7 271 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 OR8D4Q8NGM9 314 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 OR6X1Q8NH79 312 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 OR2T6Q8NHC8 308 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 ITFG1Q8TB96 612 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 TMEM190Q8WZ59 177 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 NR4A3Q92570 626 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 CCDC126Q96EE4 140 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 PPP1R36Q96LQ0 422 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 RBP7Q96R05 134 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 APOL2Q9BQE5 337 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 TM2D1Q9BX74 207 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 NKX6-2Q9C056 277 aaPredicted RBP3.95□□□□□ -1.78
SS18-223ENST00000583595 SRRQ9GZT4 340 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 OR51V1Q9H2C8 321 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 PPDPFQ9H3Y8 114 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 DUSP21Q9H596 190 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 REEP4Q9H6H4 257 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 MYOZ1Q9NP98 299 aaPredicted RBP3.95□□□□□ -1.78
SS18-223ENST00000583595 ACOT13Q9NPJ3 140 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 UXTQ9UBK9 157 aaPredicted RBP3.95□□□□□ -1.78
SS18-223ENST00000583595 TP53TG5Q9Y2B4 290 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 PKD1L3Q7Z443 1732 aa3.95□□□□□ -1.78
SS18-223ENST00000583595 CICQ96RK0 1608 aaPredicted RBP3.95□□□□□ -1.78
SS18-223ENST00000583595 CDK5RAP2Q96SN8 1893 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 LAMB2P55268 1798 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 SIPA1L1O43166 1804 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 GLYATL1P3A0A0U1RQE8 302 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 RPL37AP8A6NKH3 93 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 FAM159BA6NKW6 160 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 IDSB3KWA1 339 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 TRDCB7Z8K6 153 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 HSBP1L1C9JCN9 74 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 GFYI3L273 518 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 BMPR1BO00238 502 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 PDCD5O14737 125 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 BCKDKO14874 412 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 FABP7O15540 132 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 HPGDSO60760 199 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 CABYRO75952 493 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 LYPD3O95274 346 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 C1orf105O95561 183 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 SEMA4FO95754 770 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 HCKP08631 526 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 GADD45AP24522 165 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 PAX6P26367 422 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 STOMP27105 288 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 CALCRP30988 508 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 YWHABP31946 246 aaKnown RBP3.94□□□□□ -1.78
SS18-223ENST00000583595 RPL22P35268 128 aaKnown RBP3.94□□□□□ -1.78
SS18-223ENST00000583595 MAP2K4P45985 399 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 RFX3P48380 749 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 TGM4P49221 684 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 RBP2P50120 134 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 C1QTNF8P60827 252 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 RAB5BP61020 215 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 RND3P61587 244 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 SLC35A2P78381 396 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 ECH1Q13011 328 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 PRPSAP1Q14558 356 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 GUCA2BQ16661 112 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 ZNF718Q3SXZ3 478 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 TIMM50Q3ZCQ8 353 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 NHLRC3Q5JS37 347 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 PTRHD1Q6GMV3 140 aaKnown RBP3.94□□□□□ -1.78
SS18-223ENST00000583595 OR5M10Q6IEU7 315 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 OR52W1Q6IF63 320 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 LAIR2Q6ISS4 152 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 HAGHLQ6PII5 290 aaPredicted RBP3.94□□□□□ -1.78
SS18-223ENST00000583595 PAMR1Q6UXH9 720 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 ZNF836Q6ZNA1 936 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 FAM122BQ7Z309 247 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 MARCH9Q86YJ5 346 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 MS4A15Q8N5U1 240 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 CSNK1A1LQ8N752 337 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 OR4A4PQ8NGN8 299 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 OR9G4Q8NGQ1 327 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms