RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 ERVFRD-1P60508 538 aa6.1□□□□□ -1.43
SMARCE1-217ENST00000580654 HIST1H3AP68431 136 aa6.1□□□□□ -1.43
SMARCE1-217ENST00000580654 ECH1Q13011 328 aa6.1□□□□□ -1.43
SMARCE1-217ENST00000580654 MICBQ29980 383 aa6.1□□□□□ -1.43
SMARCE1-217ENST00000580654 LRRC10Q5BKY1 277 aa6.1□□□□□ -1.43
SMARCE1-217ENST00000580654 GCNT6Q5T4J0 391 aa6.1□□□□□ -1.43
SMARCE1-217ENST00000580654 ATPAF1Q5TC12 328 aaPredicted RBP6.1□□□□□ -1.43
SMARCE1-217ENST00000580654 HIST2H3PS2Q5TEC6 136 aa6.1□□□□□ -1.43
SMARCE1-217ENST00000580654 STUMQ69YW2 141 aa6.1□□□□□ -1.43
SMARCE1-217ENST00000580654 C16orf54Q6UWD8 224 aa6.1□□□□□ -1.43
SMARCE1-217ENST00000580654 HIST2H3AQ71DI3 136 aa6.1□□□□□ -1.43
SMARCE1-217ENST00000580654 OVCH2Q7RTZ1 564 aa6.1□□□□□ -1.43
SMARCE1-217ENST00000580654 KRT73Q86Y46 540 aa6.1□□□□□ -1.43
SMARCE1-217ENST00000580654 NKAIN4Q8IVV8 208 aa6.1□□□□□ -1.43
SMARCE1-217ENST00000580654 MSRB3Q8IXL7 192 aa6.1□□□□□ -1.43
SMARCE1-217ENST00000580654 OR4X2Q8NGF9 303 aa6.1□□□□□ -1.43
SMARCE1-217ENST00000580654 OR5T2Q8NGG2 359 aa6.1□□□□□ -1.43
SMARCE1-217ENST00000580654 FNDC8Q8TC99 324 aa6.1□□□□□ -1.43
SMARCE1-217ENST00000580654 EPS8L3Q8TE67 593 aaKnown RBP6.1□□□□□ -1.43
SMARCE1-217ENST00000580654 LRRC29Q8WV35 223 aa6.1□□□□□ -1.43
SMARCE1-217ENST00000580654 DDB2Q92466 427 aa6.1□□□□□ -1.43
SMARCE1-217ENST00000580654 SLCO4A1Q96BD0 722 aa6.1□□□□□ -1.43
SMARCE1-217ENST00000580654 SGTBQ96EQ0 304 aa6.1□□□□□ -1.43
SMARCE1-217ENST00000580654 GAFA1Q96PS6 74 aa6.1□□□□□ -1.43
SMARCE1-217ENST00000580654 SORT1Q99523 831 aa6.1□□□□□ -1.43
SMARCE1-217ENST00000580654 ELL3Q9HB65 397 aaPredicted RBP6.1□□□□□ -1.43
SMARCE1-217ENST00000580654 SLC25A37Q9NYZ2 338 aa6.1□□□□□ -1.43
SMARCE1-217ENST00000580654 PFDN2Q9UHV9 154 aa6.1□□□□□ -1.43
SMARCE1-217ENST00000580654 ATPIF1Q9UII2 106 aa6.1□□□□□ -1.43
SMARCE1-217ENST00000580654 SCOCQ9UIL1 159 aa6.1□□□□□ -1.43
SMARCE1-217ENST00000580654 A0A1W2PQ09 198 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 PRORSD1PA6NEY8 169 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 CD300LBA8K4G0 201 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 F8W735 103 aaPredicted RBP6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 H0YAE9 185 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 SDHDO14521 159 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 SPAG7O75391 227 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 SNRNP70P08621 437 aaKnown RBP6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 ACSM4P0C7M7 580 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 CTLA4P16410 223 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 PAICSP22234 425 aaKnown RBP6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 MYCNOSP40205 109 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 GSK3BP49841 420 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 CTXN1P60606 82 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 RPL23AP62750 156 aaKnown RBP6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 CSNK2BP67870 215 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 FHL1Q13642 323 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 BLMHQ13867 455 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 SCARB2Q14108 478 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 ALG10Q5BKT4 473 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 C6orf10Q5SRN2 563 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 WDR82Q6UXN9 313 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 ZNF788Q6ZQV5 615 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 LHFPL2Q6ZUX7 228 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 ARMC8Q8IUR7 673 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 OR51D1Q8NGF3 324 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 OR52H1Q8NGJ2 320 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 OR5D13Q8NGL4 314 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 OR9Q1Q8NGQ5 310 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 TMEM255BQ8WV15 326 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 SPRYD4Q8WW59 207 aaPredicted RBP6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 GTF2H4Q92759 462 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 ISOC1Q96CN7 298 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 ITCHQ96J02 903 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 DUX3Q96PT4 197 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 ZBTB18Q99592 522 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 COQ7Q99807 217 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 MRPL18Q9H0U6 180 aaKnown RBP6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 IKZF5Q9H5V7 419 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 EVA1AQ9H8M9 152 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 GRPEL1Q9HAV7 217 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 FRRS1LQ9P0K9 344 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 SLC25A10Q9UBX3 287 aaPredicted RBP6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 SLC13A4Q9UKG4 626 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 PYCARDQ9ULZ3 195 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 AURKCQ9UQB9 309 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 SMAD5-AS1Q9Y6J3 95 aa6.09□□□□□ -1.43
SMARCE1-217ENST00000580654 TEX13CA0A0J9YWL9 993 aa6.08□□□□□ -1.44
SMARCE1-217ENST00000580654 IMPA2O14732 288 aa6.08□□□□□ -1.44
SMARCE1-217ENST00000580654 POLR3GO15318 223 aaPredicted RBP6.08□□□□□ -1.44
SMARCE1-217ENST00000580654 RHBDL1O75783 438 aa6.08□□□□□ -1.44
SMARCE1-217ENST00000580654 FRMD6-AS1P0C7T7 363 aa6.08□□□□□ -1.44
SMARCE1-217ENST00000580654 COX7A1P24310 79 aa6.08□□□□□ -1.44
SMARCE1-217ENST00000580654 CEBPDP49716 269 aaPredicted RBP6.08□□□□□ -1.44
SMARCE1-217ENST00000580654 VEGFCP49767 419 aa6.08□□□□□ -1.44
SMARCE1-217ENST00000580654 RPL14P50914 215 aaKnown RBP6.08□□□□□ -1.44
SMARCE1-217ENST00000580654 ABCE1P61221 599 aaKnown RBP6.08□□□□□ -1.44
SMARCE1-217ENST00000580654 LSM6P62312 80 aaKnown RBP6.08□□□□□ -1.44
SMARCE1-217ENST00000580654 KCTD18Q6PI47 426 aaPredicted RBP6.08□□□□□ -1.44
SMARCE1-217ENST00000580654 SLC2A7Q6PXP3 512 aa6.08□□□□□ -1.44
SMARCE1-217ENST00000580654 MSANTD1Q6ZTZ1 278 aa6.08□□□□□ -1.44
SMARCE1-217ENST00000580654 PGAP1Q75T13 922 aa6.08□□□□□ -1.44
SMARCE1-217ENST00000580654 EGFL6Q8IUX8 553 aa6.08□□□□□ -1.44
SMARCE1-217ENST00000580654 ARL6IP6Q8N6S5 226 aa6.08□□□□□ -1.44
SMARCE1-217ENST00000580654 OR9I1Q8NGQ6 314 aa6.08□□□□□ -1.44
SMARCE1-217ENST00000580654 RPS4Y2Q8TD47 263 aa6.08□□□□□ -1.44
SMARCE1-217ENST00000580654 C12orf43Q96C57 262 aaKnown RBP6.08□□□□□ -1.44
SMARCE1-217ENST00000580654 TM2D3Q9BRN9 247 aa6.08□□□□□ -1.44
SMARCE1-217ENST00000580654 SLC22A4Q9H015 551 aa6.08□□□□□ -1.44
SMARCE1-217ENST00000580654 WDR13Q9H1Z4 485 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms