RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 SPTBN1Q01082 2364 aaKnown RBP9.24□□□□□ -0.93
SS18-213ENST00000579640 GGT3PA6NGU5 568 aa9.24□□□□□ -0.93
SS18-213ENST00000579640 VSTM5A8MXK1 200 aa9.24□□□□□ -0.93
SS18-213ENST00000579640 C19orf84I3L1E1 186 aa9.24□□□□□ -0.93
SS18-213ENST00000579640 SLC22A1O15245 554 aa9.24□□□□□ -0.93
SS18-213ENST00000579640 RNF224P0DH78 156 aa9.24□□□□□ -0.93
SS18-213ENST00000579640 ZNF20P17024 532 aa9.24□□□□□ -0.93
SS18-213ENST00000579640 GCH1P30793 250 aa9.24□□□□□ -0.93
SS18-213ENST00000579640 THBS4P35443 961 aa9.24□□□□□ -0.93
SS18-213ENST00000579640 SPOCK1Q08629 439 aa9.24□□□□□ -0.93
SS18-213ENST00000579640 HSD17B12Q53GQ0 312 aa9.24□□□□□ -0.93
SS18-213ENST00000579640 SERPINA12Q8IW75 414 aa9.24□□□□□ -0.93
SS18-213ENST00000579640 PP6455Q8WZ26 134 aa9.24□□□□□ -0.93
SS18-213ENST00000579640 SOX7Q9BT81 388 aa9.24□□□□□ -0.93
SS18-213ENST00000579640 CENPOQ9BU64 300 aa9.24□□□□□ -0.93
SS18-213ENST00000579640 SLITRK2Q9H156 845 aa9.24□□□□□ -0.93
SS18-213ENST00000579640 POFUT1Q9H488 388 aa9.24□□□□□ -0.93
SS18-213ENST00000579640 ZNF442Q9H7R0 627 aa9.24□□□□□ -0.93
SS18-213ENST00000579640 NOX4Q9NPH5 578 aa9.24□□□□□ -0.93
SS18-213ENST00000579640 CKLFQ9UBR5 152 aa9.24□□□□□ -0.93
SS18-213ENST00000579640 PIGLQ9Y2B2 252 aa9.24□□□□□ -0.93
SS18-213ENST00000579640 RNF115Q9Y4L5 304 aa9.24□□□□□ -0.93
SS18-213ENST00000579640 TRAV1-2A0A0B4J238 106 aa9.23□□□□□ -0.93
SS18-213ENST00000579640 ZNF816-ZNF321PA0A0X1KG74 233 aa9.23□□□□□ -0.93
SS18-213ENST00000579640 DEFB108AA8MXU0 73 aa9.23□□□□□ -0.93
SS18-213ENST00000579640 PRSS44E7EML9 344 aa9.23□□□□□ -0.93
SS18-213ENST00000579640 H3BSH0 61 aa9.23□□□□□ -0.93
SS18-213ENST00000579640 FSTP19883 344 aa9.23□□□□□ -0.93
SS18-213ENST00000579640 MYL9P24844 172 aa9.23□□□□□ -0.93
SS18-213ENST00000579640 LSM3P62310 102 aaKnown RBP9.23□□□□□ -0.93
SS18-213ENST00000579640 INSL4Q14641 139 aa9.23□□□□□ -0.93
SS18-213ENST00000579640 HLXQ14774 488 aaPredicted RBP9.23□□□□□ -0.93
SS18-213ENST00000579640 DAZAP2Q15038 168 aaPredicted RBP9.23□□□□□ -0.93
SS18-213ENST00000579640 SPATA46Q5T0L3 261 aa9.23□□□□□ -0.93
SS18-213ENST00000579640 MEX3BQ6ZN04 569 aaKnown RBP9.23□□□□□ -0.93
SS18-213ENST00000579640 KRT74Q7RTS7 529 aa9.23□□□□□ -0.93
SS18-213ENST00000579640 KBTBD8Q8NFY9 601 aa9.23□□□□□ -0.93
SS18-213ENST00000579640 OR5D14Q8NGL3 314 aa9.23□□□□□ -0.93
SS18-213ENST00000579640 KLF14Q8TD94 323 aaPredicted RBP9.23□□□□□ -0.93
SS18-213ENST00000579640 FGGYQ96C11 551 aa9.23□□□□□ -0.93
SS18-213ENST00000579640 HAVCR1Q96D42 359 aa9.23□□□□□ -0.93
SS18-213ENST00000579640 CMBLQ96DG6 245 aa9.23□□□□□ -0.93
SS18-213ENST00000579640 SPOCK3Q9BQ16 436 aa9.23□□□□□ -0.93
SS18-213ENST00000579640 FOXJ3Q9UPW0 622 aa9.23□□□□□ -0.93
SS18-213ENST00000579640 ATP23Q9Y6H3 246 aa9.23□□□□□ -0.93
SS18-213ENST00000579640 ANKHD1Q8IWZ3 2542 aaKnown RBP9.23□□□□□ -0.93
SS18-213ENST00000579640 DOPEY1Q5JWR5 2465 aa9.23□□□□□ -0.93
SS18-213ENST00000579640 UBR5O95071 2799 aaPredicted RBP9.23□□□□□ -0.93
SS18-213ENST00000579640 CD300LBA8K4G0 201 aa9.22□□□□□ -0.93
SS18-213ENST00000579640 H3BMQ9 156 aa9.22□□□□□ -0.93
SS18-213ENST00000579640 PIN1P1O15428 100 aa9.22□□□□□ -0.93
SS18-213ENST00000579640 ZNF250P15622 560 aa9.22□□□□□ -0.93
SS18-213ENST00000579640 KITLGP21583 273 aa9.22□□□□□ -0.93
SS18-213ENST00000579640 ACKR3P25106 362 aa9.22□□□□□ -0.93
SS18-213ENST00000579640 CALRP27797 417 aaKnown RBP9.22□□□□□ -0.93
SS18-213ENST00000579640 GNALP38405 381 aa9.22□□□□□ -0.93
SS18-213ENST00000579640 MAGEB1P43366 347 aa9.22□□□□□ -0.93
SS18-213ENST00000579640 MTNR1BP49286 362 aa9.22□□□□□ -0.93
SS18-213ENST00000579640 SELENOVP59797 346 aa9.22□□□□□ -0.93
SS18-213ENST00000579640 ERVS71-1P61550 626 aa9.22□□□□□ -0.93
SS18-213ENST00000579640 VBP1P61758 197 aa9.22□□□□□ -0.93
SS18-213ENST00000579640 NCS1P62166 190 aa9.22□□□□□ -0.93
SS18-213ENST00000579640 ADAM5Q6NVV9 412 aa9.22□□□□□ -0.93
SS18-213ENST00000579640 USP43Q70EL4 1123 aa9.22□□□□□ -0.93
SS18-213ENST00000579640 UTS2BQ765I0 119 aa9.22□□□□□ -0.93
SS18-213ENST00000579640 OR56B2PQ8NGI1 322 aa9.22□□□□□ -0.93
SS18-213ENST00000579640 SYNPRQ8TBG9 265 aa9.22□□□□□ -0.93
SS18-213ENST00000579640 TMEM171Q8WVE6 324 aa9.22□□□□□ -0.93
SS18-213ENST00000579640 PIGTQ969N2 578 aa9.22□□□□□ -0.93
SS18-213ENST00000579640 C12orf43Q96C57 262 aaKnown RBP9.22□□□□□ -0.93
SS18-213ENST00000579640 ADAT3Q96EY9 351 aaPredicted RBP9.22□□□□□ -0.93
SS18-213ENST00000579640 TECTBQ96PL2 329 aa9.22□□□□□ -0.93
SS18-213ENST00000579640 TMEM204Q9BSN7 226 aa9.22□□□□□ -0.93
SS18-213ENST00000579640 CHST5Q9GZS9 411 aa9.22□□□□□ -0.93
SS18-213ENST00000579640 ZCCHC4Q9H5U6 513 aa9.22□□□□□ -0.93
SS18-213ENST00000579640 NEK6Q9HC98 313 aa9.22□□□□□ -0.93
SS18-213ENST00000579640 TCF7L1Q9HCS4 588 aa9.22□□□□□ -0.93
SS18-213ENST00000579640 CA10Q9NS85 328 aa9.22□□□□□ -0.93
SS18-213ENST00000579640 SNTG1Q9NSN8 517 aa9.22□□□□□ -0.93
SS18-213ENST00000579640 KCNN3Q9UGI6 736 aa9.22□□□□□ -0.93
SS18-213ENST00000579640 POU2F3Q9UKI9 436 aa9.22□□□□□ -0.93
SS18-213ENST00000579640 CMAHPQ9Y471 501 aa9.22□□□□□ -0.93
SS18-213ENST00000579640 RELNP78509 3460 aa9.22□□□□□ -0.93
SS18-213ENST00000579640 A0A1W2PPK0 400 aa9.21□□□□□ -0.93
SS18-213ENST00000579640 ANKRD30BLA7E2S9 258 aa9.21□□□□□ -0.93
SS18-213ENST00000579640 IQCF6A8MYZ5 107 aa9.21□□□□□ -0.93
SS18-213ENST00000579640 SHISA9B4DS77 424 aa9.21□□□□□ -0.93
SS18-213ENST00000579640 PDCD5O14737 125 aa9.21□□□□□ -0.93
SS18-213ENST00000579640 SIAH2O43255 324 aa9.21□□□□□ -0.93
SS18-213ENST00000579640 ALX3O95076 343 aa9.21□□□□□ -0.93
SS18-213ENST00000579640 CST4P01036 141 aa9.21□□□□□ -0.93
SS18-213ENST00000579640 FAHP16930 419 aa9.21□□□□□ -0.93
SS18-213ENST00000579640 SRMP19623 302 aa9.21□□□□□ -0.93
SS18-213ENST00000579640 LOXP28300 417 aaPredicted RBP9.21□□□□□ -0.93
SS18-213ENST00000579640 PPP3R1P63098 170 aa9.21□□□□□ -0.93
SS18-213ENST00000579640 PSG7Q13046 419 aa9.21□□□□□ -0.93
SS18-213ENST00000579640 TNK1Q13470 666 aa9.21□□□□□ -0.93
SS18-213ENST00000579640 MOGQ16653 247 aa9.21□□□□□ -0.93
SS18-213ENST00000579640 CLVS2Q5SYC1 327 aa9.21□□□□□ -0.93
SS18-213ENST00000579640 FAM27D1Q5T7N8 215 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms