RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 PCDHGA1Q9Y5H4 931 aa12.14□□□□□ -0.47
NDEL1-204ENST00000578172 LCATP04180 440 aa12.14□□□□□ -0.47
NDEL1-204ENST00000578172 UBBP0CG47 229 aa12.14□□□□□ -0.47
NDEL1-204ENST00000578172 UBCP0CG48 685 aaKnown RBP12.14□□□□□ -0.47
NDEL1-204ENST00000578172 RRADP55042 308 aa12.14□□□□□ -0.47
NDEL1-204ENST00000578172 GABREP78334 506 aa12.14□□□□□ -0.47
NDEL1-204ENST00000578172 EMC4Q5J8M3 183 aa12.14□□□□□ -0.47
NDEL1-204ENST00000578172 OR2W3Q7Z3T1 314 aa12.14□□□□□ -0.47
NDEL1-204ENST00000578172 YRDCQ86U90 279 aaKnown RBP12.14□□□□□ -0.47
NDEL1-204ENST00000578172 CATSPERDQ86XM0 798 aa12.14□□□□□ -0.47
NDEL1-204ENST00000578172 SLC25A45Q8N413 288 aa12.14□□□□□ -0.47
NDEL1-204ENST00000578172 PNLDC1Q8NA58 520 aaKnown RBP12.14□□□□□ -0.47
NDEL1-204ENST00000578172 SUMF1Q8NBK3 374 aa12.14□□□□□ -0.47
NDEL1-204ENST00000578172 SMRP1Q8NCR6 262 aa12.14□□□□□ -0.47
NDEL1-204ENST00000578172 BPIFCQ8NFQ6 507 aa12.14□□□□□ -0.47
NDEL1-204ENST00000578172 MCHR2Q969V1 340 aa12.14□□□□□ -0.47
NDEL1-204ENST00000578172 UCN2Q96RP3 112 aa12.14□□□□□ -0.47
NDEL1-204ENST00000578172 ALKBH4Q9NXW9 302 aa12.14□□□□□ -0.47
NDEL1-204ENST00000578172 LHX6Q9UPM6 363 aa12.14□□□□□ -0.47
NDEL1-204ENST00000578172 PRR14LQ5THK1 2151 aa12.14□□□□□ -0.47
NDEL1-204ENST00000578172 DOCK10Q96BY6 2186 aa12.14□□□□□ -0.47
NDEL1-204ENST00000578172 FRYQ5TBA9 3013 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 SHANK1Q9Y566 2161 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 MEGF11A6BM72 1044 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 MS4A18H0YCH9 400 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 TXNDC12O95881 172 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 MT-ATP6P00846 226 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 ZP3P21754 424 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 RGS19P49795 217 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 CCR5P51681 352 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 DMWDQ09019 674 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 MFSD13AQ14CX5 517 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 MS4A18Q3C1V0 323 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 PDZD11Q5EBL8 140 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 ZNF684Q5T5D7 378 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 SLC22A24Q8N4F4 322 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 GPX8Q8TED1 209 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 GPHA2Q96T91 129 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 PRRT1Q99946 306 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 PLEKHJ1Q9NW61 149 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 PCDHB10Q9UN67 800 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 ZNF175Q9Y473 711 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 ZNF98A6NK75 572 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 TMEM200CA6NKL6 621 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 EIF4E2O60573 245 aaKnown RBP12.13□□□□□ -0.47
NDEL1-204ENST00000578172 IGHG1P01857 330 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 TTRP02766 147 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 ID4P47928 161 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 RAG2P55895 527 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 MARC2Q969Z3 335 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 RNF166Q96A37 237 aaPredicted RBP12.13□□□□□ -0.47
NDEL1-204ENST00000578172 FBXO17Q96EF6 278 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 ADAM19Q9H013 955 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 IFT22Q9H7X7 185 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 MEX3AA1L020 520 aaKnown RBP12.13□□□□□ -0.47
NDEL1-204ENST00000578172 ZNF814B7Z6K7 855 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 LDOC1O95751 146 aaPredicted RBP12.13□□□□□ -0.47
NDEL1-204ENST00000578172 IL5P05113 134 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 CSRP2Q16527 193 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 NHLRC3Q5JS37 347 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 SPIN3Q5JUX0 258 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 SLC36A1Q7Z2H8 476 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 OR13C8Q8NGS7 320 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 MFSD8Q8NHS3 518 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 C14orf79Q96F83 325 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 MRI1Q9BV20 369 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 DKKL1Q9UK85 242 aa12.13□□□□□ -0.47
NDEL1-204ENST00000578172 CACNA1HO95180 2353 aa12.12□□□□□ -0.47
NDEL1-204ENST00000578172 EML5Q05BV3 1969 aa12.12□□□□□ -0.47
NDEL1-204ENST00000578172 TRBV5-7A0A0A0MS05 114 aa12.12□□□□□ -0.47
NDEL1-204ENST00000578172 XRCC2O43543 280 aa12.12□□□□□ -0.47
NDEL1-204ENST00000578172 SCGNO76038 276 aa12.12□□□□□ -0.47
NDEL1-204ENST00000578172 IGKV3-11P04433 115 aa12.12□□□□□ -0.47
NDEL1-204ENST00000578172 ANOS1P23352 680 aa12.12□□□□□ -0.47
NDEL1-204ENST00000578172 OMGP23515 440 aa12.12□□□□□ -0.47
NDEL1-204ENST00000578172 PNLIPRP2P54317 469 aa12.12□□□□□ -0.47
NDEL1-204ENST00000578172 C6orf201Q7Z4U5 140 aa12.12□□□□□ -0.47
NDEL1-204ENST00000578172 SPICQ8N5J4 248 aa12.12□□□□□ -0.47
NDEL1-204ENST00000578172 EXD3Q8N9H8 876 aa12.12□□□□□ -0.47
NDEL1-204ENST00000578172 OR10Z1Q8NGY1 313 aa12.12□□□□□ -0.47
NDEL1-204ENST00000578172 OR51F2Q8NH61 342 aa12.12□□□□□ -0.47
NDEL1-204ENST00000578172 ST7LQ8TDW4 575 aa12.12□□□□□ -0.47
NDEL1-204ENST00000578172 DIRAS3O95661 229 aa12.12□□□□□ -0.47
NDEL1-204ENST00000578172 JMJD7P0C870 316 aa12.12□□□□□ -0.47
NDEL1-204ENST00000578172 FLI1Q01543 452 aaPredicted RBP12.12□□□□□ -0.47
NDEL1-204ENST00000578172 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.12□□□□□ -0.47
NDEL1-204ENST00000578172 ALKBH3Q96Q83 286 aaPredicted RBP12.12□□□□□ -0.47
NDEL1-204ENST00000578172 PRELID3BQ9Y3B1 194 aa12.12□□□□□ -0.47
NDEL1-204ENST00000578172 KCNMB2Q9Y691 235 aa12.12□□□□□ -0.47
NDEL1-204ENST00000578172 TSPAN2O60636 221 aa12.12□□□□□ -0.47
NDEL1-204ENST00000578172 SNTB1Q13884 538 aaKnown RBP12.12□□□□□ -0.47
NDEL1-204ENST00000578172 CPEB2Q7Z5Q1 589 aaKnown RBP12.12□□□□□ -0.47
NDEL1-204ENST00000578172 OR8B12Q8NGG6 310 aa12.12□□□□□ -0.47
NDEL1-204ENST00000578172 RNASE11Q8TAA1 199 aaKnown RBP12.12□□□□□ -0.47
NDEL1-204ENST00000578172 REEP6Q96HR9 211 aa12.12□□□□□ -0.47
NDEL1-204ENST00000578172 LRFN5Q96NI6 719 aa12.12□□□□□ -0.47
NDEL1-204ENST00000578172 FAM86C1Q9NVL1 165 aa12.12□□□□□ -0.47
NDEL1-204ENST00000578172 NXT1Q9UKK6 140 aaKnown RBP12.12□□□□□ -0.47
NDEL1-204ENST00000578172 OR2M5A3KFT3 312 aa12.11□□□□□ -0.47
NDEL1-204ENST00000578172 A6NIZ1 184 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms