RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 S100A11P31949 105 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 HTR5AP47898 357 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 CYB561P49447 251 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 RANP62826 216 aaKnown RBP2.53□□□□□ -2
SMCHD1-202ENST00000577300 FAM3AP98173 230 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 RIPPLY1Q0D2K3 151 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 RAB31Q13636 194 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 TNXAQ16473 311 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 ADPRMQ3LIE5 342 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 VPS26BQ4G0F5 336 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 RNASE10Q5GAN6 216 aaKnown RBP2.53□□□□□ -2
SMCHD1-202ENST00000577300 CTSL3PQ5NE16 218 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 SLC8B1Q6J4K2 584 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 RNF165Q6ZSG1 346 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 GRINAQ7Z429 371 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 TMEM144Q7Z5S9 345 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 GALNT10Q86SR1 603 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 OR4M1Q8NGD0 313 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 OR5T3Q8NGG3 340 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 OR10K1Q8NGX5 313 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 WDR36Q8NI36 951 aaKnown RBP2.53□□□□□ -2
SMCHD1-202ENST00000577300 NUBPLQ8TB37 319 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 C11orf40Q8WZ69 217 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 ST8SIA1Q92185 356 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 EMG1Q92979 244 aaKnown RBP2.53□□□□□ -2
SMCHD1-202ENST00000577300 CREB3L1Q96BA8 519 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 PPWD1Q96BP3 646 aaKnown RBP2.53□□□□□ -2
SMCHD1-202ENST00000577300 TM4SF18Q96CE8 201 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 CCDC124Q96CT7 223 aaKnown RBP2.53□□□□□ -2
SMCHD1-202ENST00000577300 MED8Q96G25 268 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 SENP8Q96LD8 212 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 COL21A1Q96P44 957 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 ACCSQ96QU6 501 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 OR2V2Q96R30 315 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 STACQ99469 402 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 VAT1Q99536 393 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 UGT2B28Q9BY64 529 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 DCLRE1BQ9H816 532 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 MEAF6Q9HAF1 191 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 TMBIM4Q9HC24 238 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 PXMP2Q9NR77 195 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 LYARQ9NX58 379 aaKnown RBP2.53□□□□□ -2
SMCHD1-202ENST00000577300 CCDC59Q9P031 241 aaKnown RBP2.53□□□□□ -2
SMCHD1-202ENST00000577300 LHX3Q9UBR4 397 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 CD84Q9UIB8 345 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 PHF11Q9UIL8 331 aa2.53□□□□□ -2
SMCHD1-202ENST00000577300 PURGQ9UJV8 347 aaKnown RBP2.53□□□□□ -2
SMCHD1-202ENST00000577300 NXT1Q9UKK6 140 aaKnown RBP2.53□□□□□ -2
SMCHD1-202ENST00000577300 VPS8Q8N3P4 1428 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 RIMS2Q9UQ26 1411 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 JCADQ9P266 1359 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 TAF1LQ8IZX4 1826 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 USP42Q9H9J4 1324 aaKnown RBP2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 KIR2DL5BA0A0G2JN68 375 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 KIR2DL5BA0A0G2JPC4 375 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 A0A1B0GV72 72 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 TMEM213A2RRL7 107 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 ISPDA4D126 451 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 TUBAL3A6NHL2 446 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 CENPXA8MT69 81 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 TRDCB7Z8K6 153 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 H7C2Y5 167 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 KCNK1O00180 336 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 TGOLN2O43493 480 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 BANF1O75531 89 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 OR2F2O95006 317 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 CLDN9O95484 217 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 AP2A1O95782 977 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 TSPAN13O95857 204 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 NDUFB10O96000 172 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 C1QBP02746 253 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 FTH1P02794 183 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 ANXA3P12429 323 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 GTF2F2P13984 249 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 NCK1P16333 377 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 PGAM1P18669 254 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 SDC1P18827 310 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 DDTP30046 118 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 CALCRP30988 508 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 KDELR2P33947 212 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 IFNGR2P38484 337 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 CD200P41217 278 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 AKR1C3P42330 323 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 RBM34P42696 430 aaKnown RBP2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 PSMD8P48556 350 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 CNN1P51911 297 aaKnown RBP2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 HSPA2P54652 639 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 RAG2P55895 527 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 MAXP61244 160 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 RAP1AP62834 184 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 TFAMQ00059 246 aaKnown RBP2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 PAX5Q02548 391 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 CSTF1Q05048 431 aaKnown RBP2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 ZP4Q12836 540 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 KRR1Q13601 381 aaKnown RBP2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 SF3A2Q15428 464 aaKnown RBP2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 OR4D1Q15615 310 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 OR8G1Q15617 311 aa2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 ZNF630Q2M218 657 aaPredicted RBP2.52□□□□□ -2.01
SMCHD1-202ENST00000577300 HSD17B12Q53GQ0 312 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms