RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 MAP1LC3CQ9BXW4 147 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 DUSP16Q9BY84 665 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 NECAP2Q9NVZ3 263 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 TAS2R9Q9NYW1 312 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 UVRAGQ9P2Y5 699 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 SPRR3Q9UBC9 169 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 KIF25Q9UIL4 384 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 ANAPC7Q9UJX3 599 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 STOML2Q9UJZ1 356 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 C3orf18Q9UK00 162 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 EIF3LQ9Y262 564 aaKnown RBP3.47□□□□□ -1.85
NUP88-213ENST00000576862 CDH10Q9Y6N8 788 aa3.47□□□□□ -1.85
NUP88-213ENST00000576862 A0A1W2PRD5 423 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 LRRC30A6NM36 301 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 CENPXA8MT69 81 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 MIF4GDA9UHW6 222 aaKnown RBP3.46□□□□□ -1.86
NUP88-213ENST00000576862 TMEM238C9JI98 176 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 F8VP50 259 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 M0QYV0 167 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 PIRO00625 290 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 CASKO14936 926 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 RAD51CO43502 376 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 XRCC2O43543 280 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 NDUFA2O43678 99 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 CHST1O43916 411 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 PROSCO94903 275 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 PRB2P02812 416 aaPredicted RBP3.46□□□□□ -1.86
NUP88-213ENST00000576862 ALDOBP05062 364 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 CALB1P05937 261 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 GP1BAP07359 652 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 GNAO1P09471 354 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 OCM2P0CE71 109 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 NCK1P16333 377 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 PGAM1P18669 254 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 XRCC1P18887 633 aaPredicted RBP3.46□□□□□ -1.86
NUP88-213ENST00000576862 TBXA2RP21731 343 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 PRDX3P30048 256 aaKnown RBP3.46□□□□□ -1.86
NUP88-213ENST00000576862 CD79BP40259 229 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 MAGEA3P43357 314 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 RFX3P48380 749 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 CDK9P50750 372 aaKnown RBP3.46□□□□□ -1.86
NUP88-213ENST00000576862 ATP1B3P54709 279 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 ERVS71-1P61550 626 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 RND3P61587 244 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 CCL7P80098 99 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 MADCAM1Q13477 382 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 HERPUD1Q15011 391 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 TRAM2Q15035 370 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 OR4D1Q15615 310 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 CHI3L2Q15782 390 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 CCDC58Q4VC31 144 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 OR5M10Q6IEU7 315 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 ANKRD26P1Q6NSI1 321 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 DNAJC24Q6P3W2 148 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 SMIM15Q7Z3B0 74 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 DHDDSQ86SQ9 333 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 ACOT1Q86TX2 421 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 LRRC52Q8N7C0 313 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 PRELID2Q8N945 189 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 C12orf29Q8N999 325 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 CCDC71LQ8N9Z2 235 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 TMEM35BQ8NCS4 154 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 OR2L8Q8NGY9 312 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 AENQ8WTP8 325 aaKnown RBP3.46□□□□□ -1.86
NUP88-213ENST00000576862 RNF138Q8WVD3 245 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 CDS1Q92903 461 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 MYLPFQ96A32 169 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 PELI1Q96FA3 418 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 MCEEQ96PE7 176 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 TMEM121Q9BTD3 319 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 ULBP2Q9BZM5 246 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 C1orf198Q9H425 327 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 DIABLOQ9NR28 239 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 PTTG3PQ9NZH4 202 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 MYEF2Q9P2K5 600 aaKnown RBP3.46□□□□□ -1.86
NUP88-213ENST00000576862 GALPQ9UBC7 116 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 GNG12Q9UBI6 72 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 LCMT1Q9UIC8 334 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 UBQLN1Q9UMX0 589 aaKnown RBP3.46□□□□□ -1.86
NUP88-213ENST00000576862 ERVW-1Q9UQF0 538 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 POLDIP2Q9Y2S7 368 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 TBL2Q9Y4P3 447 aaKnown RBP3.46□□□□□ -1.86
NUP88-213ENST00000576862 PEX16Q9Y5Y5 336 aa3.46□□□□□ -1.86
NUP88-213ENST00000576862 GNG14A0A1W2PPG7 69 aa3.45□□□□□ -1.86
NUP88-213ENST00000576862 ARL5CA6NH57 179 aa3.45□□□□□ -1.86
NUP88-213ENST00000576862 DHRS7CA6NNS2 312 aa3.45□□□□□ -1.86
NUP88-213ENST00000576862 TMEM114B3SHH9 223 aa3.45□□□□□ -1.86
NUP88-213ENST00000576862 CLDN34H7C241 214 aa3.45□□□□□ -1.86
NUP88-213ENST00000576862 M0QZ92 97 aa3.45□□□□□ -1.86
NUP88-213ENST00000576862 M0R036 132 aa3.45□□□□□ -1.86
NUP88-213ENST00000576862 SIVA1O15304 175 aa3.45□□□□□ -1.86
NUP88-213ENST00000576862 SNAI2O43623 268 aa3.45□□□□□ -1.86
NUP88-213ENST00000576862 SCELO95171 688 aa3.45□□□□□ -1.86
NUP88-213ENST00000576862 DHFRP00374 187 aa3.45□□□□□ -1.86
NUP88-213ENST00000576862 SEMG1P04279 462 aa3.45□□□□□ -1.86
NUP88-213ENST00000576862 COX5BP10606 129 aa3.45□□□□□ -1.86
NUP88-213ENST00000576862 PMCHP20382 165 aa3.45□□□□□ -1.86
NUP88-213ENST00000576862 FUT3P21217 361 aa3.45□□□□□ -1.86
NUP88-213ENST00000576862 G0S2P27469 103 aa3.45□□□□□ -1.86
NUP88-213ENST00000576862 CSKP41240 450 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms