RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 MFSD4AQ8N468 514 aa6.75□□□□□ -1.33
CCDC40-215ENST00000576033 OR10H4Q8NGA5 316 aa6.75□□□□□ -1.33
CCDC40-215ENST00000576033 OTOSQ8NHW6 89 aa6.75□□□□□ -1.33
CCDC40-215ENST00000576033 THEM6Q8WUY1 208 aa6.75□□□□□ -1.33
CCDC40-215ENST00000576033 UFD1Q92890 307 aa6.75□□□□□ -1.33
CCDC40-215ENST00000576033 PPP1R14AQ96A00 147 aa6.75□□□□□ -1.33
CCDC40-215ENST00000576033 RNF166Q96A37 237 aaPredicted RBP6.75□□□□□ -1.33
CCDC40-215ENST00000576033 ZNF799Q96GE5 643 aa6.75□□□□□ -1.33
CCDC40-215ENST00000576033 Q96MF0 132 aa6.75□□□□□ -1.33
CCDC40-215ENST00000576033 MNTQ99583 582 aa6.75□□□□□ -1.33
CCDC40-215ENST00000576033 SMR3AQ99954 134 aa6.75□□□□□ -1.33
CCDC40-215ENST00000576033 VRK1Q99986 396 aaPredicted RBP6.75□□□□□ -1.33
CCDC40-215ENST00000576033 GSX2Q9BZM3 304 aa6.75□□□□□ -1.33
CCDC40-215ENST00000576033 CXXC4Q9H2H0 198 aa6.75□□□□□ -1.33
CCDC40-215ENST00000576033 C1orf198Q9H425 327 aa6.75□□□□□ -1.33
CCDC40-215ENST00000576033 RNF167Q9H6Y7 350 aa6.75□□□□□ -1.33
CCDC40-215ENST00000576033 ISG20L2Q9H9L3 353 aaKnown RBP6.75□□□□□ -1.33
CCDC40-215ENST00000576033 MSL2Q9HCI7 577 aa6.75□□□□□ -1.33
CCDC40-215ENST00000576033 DYNLRB1Q9NP97 96 aa6.75□□□□□ -1.33
CCDC40-215ENST00000576033 ZNF701Q9NV72 531 aaPredicted RBP6.75□□□□□ -1.33
CCDC40-215ENST00000576033 BEX4Q9NWD9 120 aaPredicted RBP6.75□□□□□ -1.33
CCDC40-215ENST00000576033 BABAM2Q9NXR7 383 aa6.75□□□□□ -1.33
CCDC40-215ENST00000576033 LRP12Q9Y561 859 aa6.75□□□□□ -1.33
CCDC40-215ENST00000576033 SIRT4Q9Y6E7 314 aaPredicted RBP6.75□□□□□ -1.33
CCDC40-215ENST00000576033 IGLV3-9A0A075B6K5 115 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 A0A075B6Q4 140 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 IGHV4-30-2A0A087WSY4 118 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 LOC100506127A0A0U1RQW1 187 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 DAPL1A0PJW8 107 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 ZNF878C9JN71 531 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 E9PI62 339 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 H0YL77 283 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 OGG1O15527 345 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 SPRY3O43610 288 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 PLPP2O43688 288 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 IL1AP01583 271 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 HPXP02790 462 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 MT-ND5P03915 603 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 LCATP04180 440 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 ANXA2P07355 339 aaKnown RBP6.74□□□□□ -1.33
CCDC40-215ENST00000576033 COX5BP10606 129 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 ZNF250P15622 560 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 OTX1P32242 354 aaPredicted RBP6.74□□□□□ -1.33
CCDC40-215ENST00000576033 ETV6P41212 452 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 SERPINB10P48595 397 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 MMP15P51511 669 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 KLF3P57682 345 aaPredicted RBP6.74□□□□□ -1.33
CCDC40-215ENST00000576033 ZNF121P58317 390 aaPredicted RBP6.74□□□□□ -1.33
CCDC40-215ENST00000576033 SNRPD2P62316 118 aaKnown RBP6.74□□□□□ -1.33
CCDC40-215ENST00000576033 FABP5Q01469 135 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 ZNF92Q03936 586 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 DCTN2Q13561 401 aaKnown RBP6.74□□□□□ -1.33
CCDC40-215ENST00000576033 CARTPTQ16568 116 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 NKPD1Q17RQ9 610 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 ZNF829Q3KNS6 432 aaPredicted RBP6.74□□□□□ -1.33
CCDC40-215ENST00000576033 ZNF404Q494X3 552 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 DMRTC1Q5HYR2 192 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 TEX30Q5JUR7 227 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 DMKNQ6E0U4 476 aaPredicted RBP6.74□□□□□ -1.33
CCDC40-215ENST00000576033 OR2T2Q6IF00 324 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 FAM57BQ71RH2 274 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 SLC16A9Q7RTY1 509 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 PRSS45Q7RTY3 260 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 KLBQ86Z14 1044 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 ZNF283Q8N7M2 679 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 OR10AD1Q8NGE0 317 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 OR1J2Q8NGS2 313 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 SYNPRQ8TBG9 265 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 RNF133Q8WVZ7 376 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 YIPF5Q969M3 257 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 PIGTQ969N2 578 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 CMBLQ96DG6 245 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 LYZL4Q96KX0 146 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 PGLYRP3Q96LB9 341 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 FOXC2Q99958 501 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 MMP27Q9H306 513 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 PLGRKTQ9HBL7 147 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 PALMDQ9NP74 551 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 TRIM36Q9NQ86 728 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 FAIMQ9NVQ4 179 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 TXNL4BQ9NX01 149 aaKnown RBP6.74□□□□□ -1.33
CCDC40-215ENST00000576033 LAMP5Q9UJQ1 280 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 SSR3Q9UNL2 185 aa6.74□□□□□ -1.33
CCDC40-215ENST00000576033 B9A039 149 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 H7C417 338 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 M0R233 179 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 SMAD7O15105 426 aaKnown RBP6.73□□□□□ -1.33
CCDC40-215ENST00000576033 MLNRO43193 412 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 TBX1O43435 398 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 TIMM8AO60220 97 aaPredicted RBP6.73□□□□□ -1.33
CCDC40-215ENST00000576033 ICMTO60725 284 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 PNPP00491 289 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 IGHV1-46P01743 117 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 HLA-DPB1P04440 258 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 H2BFMP0C1H6 154 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 ALOX5APP20292 161 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 HSD11B1P28845 292 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 ATP6V1E1P36543 226 aa6.73□□□□□ -1.33
CCDC40-215ENST00000576033 RPS19P39019 145 aaKnown RBP6.73□□□□□ -1.33
CCDC40-215ENST00000576033 PSMB10P40306 273 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms