RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 PAPD5Q8NDF8 572 aaKnown RBP7.34□□□□□ -1.23
SMG6-218ENST00000575454 SLC26A10Q8NG04 563 aa7.34□□□□□ -1.23
SMG6-218ENST00000575454 OR2T12Q8NG77 320 aa7.34□□□□□ -1.23
SMG6-218ENST00000575454 OR9Q1Q8NGQ5 310 aa7.34□□□□□ -1.23
SMG6-218ENST00000575454 LRRC29Q8WV35 223 aa7.34□□□□□ -1.23
SMG6-218ENST00000575454 SIKE1Q9BRV8 207 aa7.34□□□□□ -1.23
SMG6-218ENST00000575454 MMP28Q9H239 520 aa7.34□□□□□ -1.23
SMG6-218ENST00000575454 SRA1Q9HD15 236 aaKnown RBP7.34□□□□□ -1.23
SMG6-218ENST00000575454 GID8Q9NWU2 228 aa7.34□□□□□ -1.23
SMG6-218ENST00000575454 DNAJB11Q9UBS4 358 aa7.34□□□□□ -1.23
SMG6-218ENST00000575454 RAB21Q9UL25 225 aa7.34□□□□□ -1.23
SMG6-218ENST00000575454 SIGLEC7Q9Y286 467 aa7.34□□□□□ -1.23
SMG6-218ENST00000575454 AP3M1Q9Y2T2 418 aa7.34□□□□□ -1.23
SMG6-218ENST00000575454 CAPN7Q9Y6W3 813 aa7.34□□□□□ -1.23
SMG6-218ENST00000575454 A0A1W2PPH5 198 aa7.33□□□□□ -1.24
SMG6-218ENST00000575454 A0A1W2PQ09 198 aa7.33□□□□□ -1.24
SMG6-218ENST00000575454 A0A1W2PRQ8 180 aa7.33□□□□□ -1.24
SMG6-218ENST00000575454 BBIP1A8MTZ0 92 aa7.33□□□□□ -1.24
SMG6-218ENST00000575454 FAM220BPB1ANY3 271 aa7.33□□□□□ -1.24
SMG6-218ENST00000575454 H0YAE9 185 aa7.33□□□□□ -1.24
SMG6-218ENST00000575454 ACOT8O14734 319 aa7.33□□□□□ -1.24
SMG6-218ENST00000575454 DUS4LO95620 317 aaKnown RBP7.33□□□□□ -1.24
SMG6-218ENST00000575454 ALDOBP05062 364 aa7.33□□□□□ -1.24
SMG6-218ENST00000575454 TROVE2P10155 538 aaKnown RBP eCLIP7.33□□□□□ -1.24
SMG6-218ENST00000575454 CD28P10747 220 aa7.33□□□□□ -1.24
SMG6-218ENST00000575454 ZNF823P16415 610 aa7.33□□□□□ -1.24
SMG6-218ENST00000575454 POU1F1P28069 291 aa7.33□□□□□ -1.24
SMG6-218ENST00000575454 SLC7A2P52569 658 aa7.33□□□□□ -1.24
SMG6-218ENST00000575454 KLRD1Q13241 179 aa7.33□□□□□ -1.24
SMG6-218ENST00000575454 DCTN2Q13561 401 aaKnown RBP7.33□□□□□ -1.24
SMG6-218ENST00000575454 DGCR6Q14129 220 aa7.33□□□□□ -1.24
SMG6-218ENST00000575454 SNCBQ16143 134 aa7.33□□□□□ -1.24
SMG6-218ENST00000575454 LY6EQ16553 131 aa7.33□□□□□ -1.24
SMG6-218ENST00000575454 IFI44LQ53G44 452 aa7.33□□□□□ -1.24
SMG6-218ENST00000575454 DEFB121Q5J5C9 76 aa7.33□□□□□ -1.24
SMG6-218ENST00000575454 SMARCD3Q6STE5 483 aa7.33□□□□□ -1.24
SMG6-218ENST00000575454 FKBP9P1Q75LS8 142 aa7.33□□□□□ -1.24
SMG6-218ENST00000575454 CPLX4Q7Z7G2 160 aa7.33□□□□□ -1.24
SMG6-218ENST00000575454 ZBTB46Q86UZ6 589 aa7.33□□□□□ -1.24
SMG6-218ENST00000575454 LINC00346Q8IVM7 164 aa7.33□□□□□ -1.24
SMG6-218ENST00000575454 FTMTQ8N4E7 242 aa7.33□□□□□ -1.24
SMG6-218ENST00000575454 FAM216BQ8N7L0 139 aa7.33□□□□□ -1.24
SMG6-218ENST00000575454 OR1M1Q8NGA1 313 aa7.33□□□□□ -1.24
SMG6-218ENST00000575454 DYDC1Q8WWB3 177 aa7.33□□□□□ -1.24
SMG6-218ENST00000575454 H1FXQ92522 213 aaKnown RBP7.33□□□□□ -1.24
SMG6-218ENST00000575454 ITPKCQ96DU7 683 aa7.33□□□□□ -1.24
SMG6-218ENST00000575454 FAM46AQ96IP4 442 aaKnown RBP7.33□□□□□ -1.24
SMG6-218ENST00000575454 RSRC1Q96IZ7 334 aaKnown RBP7.33□□□□□ -1.24
SMG6-218ENST00000575454 TSSK2Q96PF2 358 aa7.33□□□□□ -1.24
SMG6-218ENST00000575454 TMEM120AQ9BXJ8 343 aa7.33□□□□□ -1.24
SMG6-218ENST00000575454 NSRP1Q9H0G5 558 aaKnown RBP7.33□□□□□ -1.24
SMG6-218ENST00000575454 HEXA-AS1Q9H8Q6 139 aa7.33□□□□□ -1.24
SMG6-218ENST00000575454 SP140LQ9H930 580 aa7.33□□□□□ -1.24
SMG6-218ENST00000575454 TMBIM4Q9HC24 238 aa7.33□□□□□ -1.24
SMG6-218ENST00000575454 PNRC2Q9NPJ4 139 aaKnown RBP7.33□□□□□ -1.24
SMG6-218ENST00000575454 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.33□□□□□ -1.24
SMG6-218ENST00000575454 SNX13Q9Y5W8 968 aa7.33□□□□□ -1.24
SMG6-218ENST00000575454 V9GYY5 206 aaPredicted RBP7.33□□□□□ -1.24
SMG6-218ENST00000575454 TRBV23-1A0A0A0MS06 115 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 hCG_1809904A0A1W2PP81 198 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 A0A1W2PPE2 198 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 A0A1W2PR64 198 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 A0A1W2PRV1 198 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 UNC119BA6NIH7 251 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 E9PQ18 207 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 H3BUI4 141 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 J3KTA2 159 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 DCTN6O00399 190 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 ARPC3O15145 178 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 XRCC2O43543 280 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 IDH3BO43837 385 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 ZNF682O95780 498 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 CFL1P23528 166 aaKnown RBP7.32□□□□□ -1.24
SMG6-218ENST00000575454 NOS3P29474 1203 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 SLC6A6P31641 620 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 OTX1P32242 354 aaPredicted RBP7.32□□□□□ -1.24
SMG6-218ENST00000575454 CAV3P56539 151 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 IL5RAQ01344 420 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 SPIBQ01892 262 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 PRB3Q04118 309 aaPredicted RBP7.32□□□□□ -1.24
SMG6-218ENST00000575454 CD69Q07108 199 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 TAF13Q15543 124 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 MAPRE2Q15555 327 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 SNAI3Q3KNW1 292 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 GLYATL3Q5SZD4 288 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 STUMQ69YW2 141 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 CRIP3Q6Q6R5 217 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 WDR82Q6UXN9 313 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 VTCN1Q7Z7D3 282 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 C11orf53Q8IXP5 236 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 LYG1Q8N1E2 194 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 Q8N2B8 174 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 LNX2Q8N448 690 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 PNKDQ8N490 385 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 OR56B2PQ8NGI1 322 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 OR10Z1Q8NGY1 313 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 OR2AE1Q8NHA4 323 aa7.32□□□□□ -1.24
SMG6-218ENST00000575454 DUS3LQ96G46 650 aaKnown RBP7.32□□□□□ -1.24
SMG6-218ENST00000575454 ERMAPQ96PL5 475 aaPredicted RBP7.32□□□□□ -1.24
SMG6-218ENST00000575454 NMNAT3Q96T66 252 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms