RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 TMEM33P57088 247 aa9.37□□□□□ -0.91
CHD3-216ENST00000573936 ACTA2P62736 377 aa9.37□□□□□ -0.91
CHD3-216ENST00000573936 ACTG2P63267 376 aa9.37□□□□□ -0.91
CHD3-216ENST00000573936 FAM3AP98173 230 aa9.37□□□□□ -0.91
CHD3-216ENST00000573936 ZNF85Q03923 595 aa9.37□□□□□ -0.91
CHD3-216ENST00000573936 SLC3A1Q07837 685 aa9.37□□□□□ -0.91
CHD3-216ENST00000573936 MZT1Q08AG7 82 aa9.37□□□□□ -0.91
CHD3-216ENST00000573936 HFEQ30201 348 aa9.37□□□□□ -0.91
CHD3-216ENST00000573936 LAIR2Q6ISS4 152 aa9.37□□□□□ -0.91
CHD3-216ENST00000573936 Q6ZR03 302 aa9.37□□□□□ -0.91
CHD3-216ENST00000573936 THAP5Q7Z6K1 395 aa9.37□□□□□ -0.91
CHD3-216ENST00000573936 KLBQ86Z14 1044 aa9.37□□□□□ -0.91
CHD3-216ENST00000573936 FTMTQ8N4E7 242 aa9.37□□□□□ -0.91
CHD3-216ENST00000573936 SPERTQ8NA61 448 aa9.37□□□□□ -0.91
CHD3-216ENST00000573936 OR8B12Q8NGG6 310 aa9.37□□□□□ -0.91
CHD3-216ENST00000573936 CNIH3Q8TBE1 160 aa9.37□□□□□ -0.91
CHD3-216ENST00000573936 APH1BQ8WW43 257 aa9.37□□□□□ -0.91
CHD3-216ENST00000573936 GTF3AQ92664 365 aaKnown RBP9.37□□□□□ -0.91
CHD3-216ENST00000573936 LGALS12Q96DT0 336 aa9.37□□□□□ -0.91
CHD3-216ENST00000573936 TTTY10Q9BZA0 68 aa9.37□□□□□ -0.91
CHD3-216ENST00000573936 PBOV1Q9GZY1 135 aa9.37□□□□□ -0.91
CHD3-216ENST00000573936 UBAP1Q9NZ09 502 aa9.37□□□□□ -0.91
CHD3-216ENST00000573936 NUFIP1Q9UHK0 495 aaKnown RBP9.37□□□□□ -0.91
CHD3-216ENST00000573936 OR52A1Q9UKL2 312 aa9.37□□□□□ -0.91
CHD3-216ENST00000573936 SNX5Q9Y5X3 404 aa9.37□□□□□ -0.91
CHD3-216ENST00000573936 PLCE1Q9P212 2302 aa9.37□□□□□ -0.91
CHD3-216ENST00000573936 IGHV4-30-2A0A087WSY4 118 aa9.36□□□□□ -0.91
CHD3-216ENST00000573936 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.36□□□□□ -0.91
CHD3-216ENST00000573936 hCG_38984A0A1B0GV85 526 aa9.36□□□□□ -0.91
CHD3-216ENST00000573936 A0A1B0GWJ7 208 aa9.36□□□□□ -0.91
CHD3-216ENST00000573936 PRR32B1ATL7 298 aa9.36□□□□□ -0.91
CHD3-216ENST00000573936 VWC2LB2RUY7 222 aa9.36□□□□□ -0.91
CHD3-216ENST00000573936 IFNL4K9M1U5 179 aa9.36□□□□□ -0.91
CHD3-216ENST00000573936 MTRF1O75570 445 aaKnown RBP9.36□□□□□ -0.91
CHD3-216ENST00000573936 NCR1O76036 304 aa9.36□□□□□ -0.91
CHD3-216ENST00000573936 COL8A2P25067 703 aa9.36□□□□□ -0.91
CHD3-216ENST00000573936 NR4A2P43354 598 aa9.36□□□□□ -0.91
CHD3-216ENST00000573936 GSK3AP49840 483 aa9.36□□□□□ -0.91
CHD3-216ENST00000573936 MED21Q13503 144 aa9.36□□□□□ -0.91
CHD3-216ENST00000573936 GALEQ14376 348 aa9.36□□□□□ -0.91
CHD3-216ENST00000573936 OR8G1Q15617 311 aa9.36□□□□□ -0.91
CHD3-216ENST00000573936 SMN1Q16637 294 aaKnown RBP9.36□□□□□ -0.91
CHD3-216ENST00000573936 GFOD2Q3B7J2 385 aa9.36□□□□□ -0.91
CHD3-216ENST00000573936 CDONQ4KMG0 1287 aa9.36□□□□□ -0.91
CHD3-216ENST00000573936 ZNF684Q5T5D7 378 aa9.36□□□□□ -0.91
CHD3-216ENST00000573936 LIPNQ5VXI9 398 aa9.36□□□□□ -0.91
CHD3-216ENST00000573936 SSX6Q7RTT6 188 aa9.36□□□□□ -0.91
CHD3-216ENST00000573936 RFLNBQ8N5W9 214 aa9.36□□□□□ -0.91
CHD3-216ENST00000573936 CELF2-AS1Q8N7Q2 184 aa9.36□□□□□ -0.91
CHD3-216ENST00000573936 BHLHE23Q8NDY6 225 aa9.36□□□□□ -0.91
CHD3-216ENST00000573936 OR56B2PQ8NGI1 322 aa9.36□□□□□ -0.91
CHD3-216ENST00000573936 HAVCR2Q8TDQ0 301 aa9.36□□□□□ -0.91
CHD3-216ENST00000573936 SIGLEC11Q96RL6 698 aa9.36□□□□□ -0.91
CHD3-216ENST00000573936 AMBNQ9NP70 447 aa9.36□□□□□ -0.91
CHD3-216ENST00000573936 ABCB9Q9NP78 766 aa9.36□□□□□ -0.91
CHD3-216ENST00000573936 FGF20Q9NP95 211 aaPredicted RBP9.36□□□□□ -0.91
CHD3-216ENST00000573936 ZNF319Q9P2F9 582 aa9.36□□□□□ -0.91
CHD3-216ENST00000573936 GNG8Q9UK08 70 aa9.36□□□□□ -0.91
CHD3-216ENST00000573936 GTF2A1LQ9UNN4 478 aa9.36□□□□□ -0.91
CHD3-216ENST00000573936 CUBNO60494 3623 aa9.35□□□□□ -0.91
CHD3-216ENST00000573936 C5orf63A6NC05 138 aa9.35□□□□□ -0.91
CHD3-216ENST00000573936 RNF223E7ERA6 249 aa9.35□□□□□ -0.91
CHD3-216ENST00000573936 MAGEB4O15481 346 aaPredicted RBP9.35□□□□□ -0.91
CHD3-216ENST00000573936 SRSF10O75494 262 aaKnown RBP9.35□□□□□ -0.91
CHD3-216ENST00000573936 RPP14O95059 124 aaKnown RBP9.35□□□□□ -0.91
CHD3-216ENST00000573936 IGHA1P01876 353 aa9.35□□□□□ -0.91
CHD3-216ENST00000573936 USF1P22415 310 aaPredicted RBP9.35□□□□□ -0.91
CHD3-216ENST00000573936 DCKP27707 260 aa9.35□□□□□ -0.91
CHD3-216ENST00000573936 GNALP38405 381 aa9.35□□□□□ -0.91
CHD3-216ENST00000573936 GPR6P46095 362 aaPredicted RBP9.35□□□□□ -0.91
CHD3-216ENST00000573936 MAP2K3P46734 347 aa9.35□□□□□ -0.91
CHD3-216ENST00000573936 CSNK2BP67870 215 aa9.35□□□□□ -0.91
CHD3-216ENST00000573936 LOXL1Q08397 574 aaPredicted RBP9.35□□□□□ -0.91
CHD3-216ENST00000573936 MRPL28Q13084 256 aaKnown RBP9.35□□□□□ -0.91
CHD3-216ENST00000573936 RIN1Q13671 783 aa9.35□□□□□ -0.91
CHD3-216ENST00000573936 OR8B8Q15620 311 aa9.35□□□□□ -0.91
CHD3-216ENST00000573936 BCL2L15Q5TBC7 163 aa9.35□□□□□ -0.91
CHD3-216ENST00000573936 ARFGEF3Q5TH69 2177 aa9.35□□□□□ -0.91
CHD3-216ENST00000573936 PEG10Q86TG7 708 aaKnown RBP9.35□□□□□ -0.91
CHD3-216ENST00000573936 COMMD2Q86X83 199 aa9.35□□□□□ -0.91
CHD3-216ENST00000573936 ELMOD2Q8IZ81 293 aa9.35□□□□□ -0.91
CHD3-216ENST00000573936 CCDC54Q8NEL0 328 aa9.35□□□□□ -0.91
CHD3-216ENST00000573936 OR52I1Q8NGK6 324 aa9.35□□□□□ -0.91
CHD3-216ENST00000573936 ITLN1Q8WWA0 313 aa9.35□□□□□ -0.91
CHD3-216ENST00000573936 YIPF5Q969M3 257 aa9.35□□□□□ -0.91
CHD3-216ENST00000573936 ERGIC1Q969X5 290 aa9.35□□□□□ -0.91
CHD3-216ENST00000573936 TIMD4Q96H15 378 aa9.35□□□□□ -0.91
CHD3-216ENST00000573936 MEGF10Q96KG7 1140 aa9.35□□□□□ -0.91
CHD3-216ENST00000573936 OR2V2Q96R30 315 aa9.35□□□□□ -0.91
CHD3-216ENST00000573936 JAM3Q9BX67 310 aa9.35□□□□□ -0.91
CHD3-216ENST00000573936 ZNF275Q9NSD4 429 aaPredicted RBP9.35□□□□□ -0.91
CHD3-216ENST00000573936 LRCH1Q9Y2L9 728 aa9.35□□□□□ -0.91
CHD3-216ENST00000573936 NBEAL1Q6ZS30 2694 aa9.34□□□□□ -0.91
CHD3-216ENST00000573936 EFCAB10A6NFE3 127 aa9.34□□□□□ -0.91
CHD3-216ENST00000573936 RNF212BA8MTL3 300 aa9.34□□□□□ -0.91
CHD3-216ENST00000573936 CLDN25C9JDP6 229 aa9.34□□□□□ -0.91
CHD3-216ENST00000573936 LYNX1G3V0Z9 82 aa9.34□□□□□ -0.91
CHD3-216ENST00000573936 H0YL77 283 aa9.34□□□□□ -0.91
CHD3-216ENST00000573936 J3QLW9 94 aa9.34□□□□□ -0.91
CHD3-216ENST00000573936 MLNRO43193 412 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms