RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 OPN1LWP04000 364 aa16.87■□□□□ 0.29
SCARF1-206ENST00000573852 GSTP1P09211 210 aaKnown RBP16.87■□□□□ 0.29
SCARF1-206ENST00000573852 FOSL2P15408 326 aa16.87■□□□□ 0.29
SCARF1-206ENST00000573852 SUPT4H1P63272 117 aaKnown RBP16.87■□□□□ 0.29
SCARF1-206ENST00000573852 MST1LQ2TV78 715 aa16.87■□□□□ 0.29
SCARF1-206ENST00000573852 VAX1Q5SQQ9 334 aa16.87■□□□□ 0.29
SCARF1-206ENST00000573852 OGFOD3Q6PK18 319 aa16.87■□□□□ 0.29
SCARF1-206ENST00000573852 NAA40Q86UY6 237 aa16.87■□□□□ 0.29
SCARF1-206ENST00000573852 SLC2A4RGQ9NR83 387 aa16.87■□□□□ 0.29
SCARF1-206ENST00000573852 SRPK3Q9UPE1 567 aa16.87■□□□□ 0.29
SCARF1-206ENST00000573852 KLF2Q9Y5W3 355 aaPredicted RBP16.87■□□□□ 0.29
SCARF1-206ENST00000573852 FLVCR1Q9Y5Y0 555 aa16.87■□□□□ 0.29
SCARF1-206ENST00000573852 PRUNE2Q8WUY3 3088 aa16.86■□□□□ 0.29
SCARF1-206ENST00000573852 A0A1B0GX78 115 aa16.86■□□□□ 0.29
SCARF1-206ENST00000573852 LMO7DNF2Z398 122 aa16.86■□□□□ 0.29
SCARF1-206ENST00000573852 ZNF17P17021 662 aa16.86■□□□□ 0.29
SCARF1-206ENST00000573852 ANKRD55Q3KP44 614 aa16.86■□□□□ 0.29
SCARF1-206ENST00000573852 DMRTC1Q5HYR2 192 aa16.86■□□□□ 0.29
SCARF1-206ENST00000573852 ABHD12BQ7Z5M8 362 aaPredicted RBP16.86■□□□□ 0.29
SCARF1-206ENST00000573852 OR8B12Q8NGG6 310 aa16.86■□□□□ 0.29
SCARF1-206ENST00000573852 LHX6Q9UPM6 363 aa16.86■□□□□ 0.29
SCARF1-206ENST00000573852 B3GALT5Q9Y2C3 310 aa16.86■□□□□ 0.29
SCARF1-206ENST00000573852 IGHV1OR21-1A0A087WYE8 117 aa16.86■□□□□ 0.29
SCARF1-206ENST00000573852 CEACAM18A8MTB9 384 aa16.86■□□□□ 0.29
SCARF1-206ENST00000573852 TMEM200AQ86VY9 491 aa16.86■□□□□ 0.29
SCARF1-206ENST00000573852 D2HGDHQ8N465 521 aa16.86■□□□□ 0.29
SCARF1-206ENST00000573852 ARRDC1Q8N5I2 433 aa16.86■□□□□ 0.29
SCARF1-206ENST00000573852 APCDD1LQ8NCL9 501 aa16.86■□□□□ 0.29
SCARF1-206ENST00000573852 ARHGAP5-AS1Q96IT6 56 aa16.86■□□□□ 0.29
SCARF1-206ENST00000573852 RTBDNQ9BSG5 229 aaPredicted RBP16.86■□□□□ 0.29
SCARF1-206ENST00000573852 GPR84Q9NQS5 396 aa16.86■□□□□ 0.29
SCARF1-206ENST00000573852 ALKBH4Q9NXW9 302 aa16.86■□□□□ 0.29
SCARF1-206ENST00000573852 RPH3AQ9Y2J0 694 aaPredicted RBP16.86■□□□□ 0.29
SCARF1-206ENST00000573852 CARHSP1Q9Y2V2 147 aaKnown RBP16.86■□□□□ 0.29
SCARF1-206ENST00000573852 VSTM2BA6NLU5 285 aa16.85■□□□□ 0.29
SCARF1-206ENST00000573852 H3F3CQ6NXT2 135 aa16.85■□□□□ 0.29
SCARF1-206ENST00000573852 PLPP5Q8NEB5 264 aa16.85■□□□□ 0.29
SCARF1-206ENST00000573852 KCNG3Q8TAE7 436 aa16.85■□□□□ 0.29
SCARF1-206ENST00000573852 FAM71F1Q96KD3 344 aaPredicted RBP16.85■□□□□ 0.29
SCARF1-206ENST00000573852 OR10C1Q96KK4 312 aa16.85■□□□□ 0.29
SCARF1-206ENST00000573852 CDC6Q99741 560 aa16.85■□□□□ 0.29
SCARF1-206ENST00000573852 RAB18Q9NP72 206 aa16.85■□□□□ 0.29
SCARF1-206ENST00000573852 SLC22A11Q9NSA0 550 aa16.85■□□□□ 0.29
SCARF1-206ENST00000573852 POLR1DQ9Y2S0 133 aa16.85■□□□□ 0.29
SCARF1-206ENST00000573852 CD27P26842 260 aa16.85■□□□□ 0.29
SCARF1-206ENST00000573852 ZNF121P58317 390 aaPredicted RBP16.85■□□□□ 0.29
SCARF1-206ENST00000573852 ZNF585AQ6P3V2 769 aa16.85■□□□□ 0.29
SCARF1-206ENST00000573852 PRSS54Q6PEW0 395 aa16.85■□□□□ 0.29
SCARF1-206ENST00000573852 CNTNAP3BQ96NU0 1288 aa16.85■□□□□ 0.29
SCARF1-206ENST00000573852 TMEM59Q9BXS4 323 aa16.85■□□□□ 0.29
SCARF1-206ENST00000573852 TREM1Q9NP99 234 aa16.85■□□□□ 0.29
SCARF1-206ENST00000573852 C2CD4DB7Z1M9 353 aa16.84■□□□□ 0.29
SCARF1-206ENST00000573852 ZNF878C9JN71 531 aa16.84■□□□□ 0.29
SCARF1-206ENST00000573852 GIMD1P0DJR0 217 aa16.84■□□□□ 0.29
SCARF1-206ENST00000573852 MYBPHQ13203 477 aa16.84■□□□□ 0.29
SCARF1-206ENST00000573852 THEM4Q5T1C6 240 aa16.84■□□□□ 0.29
SCARF1-206ENST00000573852 DHRS7BQ6IAN0 325 aaPredicted RBP16.84■□□□□ 0.29
SCARF1-206ENST00000573852 PGAP1Q75T13 922 aa16.84■□□□□ 0.29
SCARF1-206ENST00000573852 TMPRSS9Q7Z410 1059 aa16.84■□□□□ 0.29
SCARF1-206ENST00000573852 OR13G1Q8NGZ3 307 aa16.84■□□□□ 0.29
SCARF1-206ENST00000573852 MMP26Q9NRE1 261 aa16.84■□□□□ 0.29
SCARF1-206ENST00000573852 MLXQ9UH92 298 aa16.84■□□□□ 0.29
SCARF1-206ENST00000573852 CRTAPO75718 401 aaPredicted RBP16.84■□□□□ 0.29
SCARF1-206ENST00000573852 HCKP08631 526 aa16.84■□□□□ 0.29
SCARF1-206ENST00000573852 LYL1P12980 280 aa16.84■□□□□ 0.29
SCARF1-206ENST00000573852 MYF5P13349 255 aa16.84■□□□□ 0.29
SCARF1-206ENST00000573852 NPBWR1P48145 328 aa16.84■□□□□ 0.29
SCARF1-206ENST00000573852 CLRN1P58418 232 aa16.84■□□□□ 0.29
SCARF1-206ENST00000573852 DCDP81605 110 aaKnown RBP16.84■□□□□ 0.29
SCARF1-206ENST00000573852 OR2AJ1Q8NGZ0 328 aa16.84■□□□□ 0.29
SCARF1-206ENST00000573852 OR51F2Q8NH61 342 aa16.84■□□□□ 0.29
SCARF1-206ENST00000573852 NUBPLQ8TB37 319 aa16.84■□□□□ 0.29
SCARF1-206ENST00000573852 OCSTAMPQ9BR26 566 aa16.84■□□□□ 0.29
SCARF1-206ENST00000573852 FANCFQ9NPI8 374 aa16.84■□□□□ 0.29
SCARF1-206ENST00000573852 OR2S2Q9NQN1 319 aa16.84■□□□□ 0.29
SCARF1-206ENST00000573852 A0A1W2PNV4 684 aa16.83■□□□□ 0.29
SCARF1-206ENST00000573852 ZNF705EA8MWA4 302 aaPredicted RBP16.83■□□□□ 0.29
SCARF1-206ENST00000573852 SDCBPO00560 298 aaPredicted RBP16.83■□□□□ 0.29
SCARF1-206ENST00000573852 MFNGO00587 321 aa16.83■□□□□ 0.29
SCARF1-206ENST00000573852 GFOD2Q3B7J2 385 aa16.83■□□□□ 0.29
SCARF1-206ENST00000573852 AADACL3Q5VUY0 350 aa16.83■□□□□ 0.29
SCARF1-206ENST00000573852 SHEQ5VZ18 495 aa16.83■□□□□ 0.29
SCARF1-206ENST00000573852 CARD17Q5XLA6 110 aa16.83■□□□□ 0.29
SCARF1-206ENST00000573852 PEG10Q86TG7 708 aaKnown RBP16.83■□□□□ 0.29
SCARF1-206ENST00000573852 OR5H2Q8NGV7 314 aa16.83■□□□□ 0.29
SCARF1-206ENST00000573852 ASH2LQ9UBL3 628 aa16.83■□□□□ 0.29
SCARF1-206ENST00000573852 RER1O15258 196 aa16.83■□□□□ 0.28
SCARF1-206ENST00000573852 HTR3BO95264 441 aa16.83■□□□□ 0.28
SCARF1-206ENST00000573852 PGA4P0DJD7 388 aa16.83■□□□□ 0.28
SCARF1-206ENST00000573852 PGA3P0DJD8 388 aa16.83■□□□□ 0.28
SCARF1-206ENST00000573852 PVALBP20472 110 aaPredicted RBP16.83■□□□□ 0.28
SCARF1-206ENST00000573852 FPR2P25090 351 aa16.83■□□□□ 0.28
SCARF1-206ENST00000573852 SLC6A9P48067 706 aa16.83■□□□□ 0.28
SCARF1-206ENST00000573852 ACTBL2Q562R1 376 aa16.83■□□□□ 0.28
SCARF1-206ENST00000573852 TSTD1Q8NFU3 115 aa16.83■□□□□ 0.28
SCARF1-206ENST00000573852 ST6GALNAC5Q9BVH7 336 aa16.83■□□□□ 0.28
SCARF1-206ENST00000573852 UQCC1Q9NVA1 299 aa16.83■□□□□ 0.28
SCARF1-206ENST00000573852 FAM96BQ9Y3D0 163 aa16.83■□□□□ 0.28
SCARF1-206ENST00000573852 RALGAPA1Q6GYQ0 2036 aa16.83■□□□□ 0.28
SCARF1-206ENST00000573852 AMY2BP19961 511 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms