RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 ZNF92Q03936 586 aa8.38□□□□□ -1.07
CTDNEP1-202ENST00000570380 ANKDD1AQ495B1 522 aa8.38□□□□□ -1.07
CTDNEP1-202ENST00000570380 WDR82Q6UXN9 313 aa8.38□□□□□ -1.07
CTDNEP1-202ENST00000570380 CFAP77Q6ZQR2 320 aa8.38□□□□□ -1.07
CTDNEP1-202ENST00000570380 ZNF788Q6ZQV5 615 aa8.38□□□□□ -1.07
CTDNEP1-202ENST00000570380 OAFQ86UD1 273 aa8.38□□□□□ -1.07
CTDNEP1-202ENST00000570380 MRPL41Q8IXM3 137 aaKnown RBP8.38□□□□□ -1.07
CTDNEP1-202ENST00000570380 MKXQ8IYA7 352 aa8.38□□□□□ -1.07
CTDNEP1-202ENST00000570380 OR2AE1Q8NHA4 323 aa8.38□□□□□ -1.07
CTDNEP1-202ENST00000570380 TFAP2CQ92754 450 aa8.38□□□□□ -1.07
CTDNEP1-202ENST00000570380 ZNF570Q96NI8 536 aa8.38□□□□□ -1.07
CTDNEP1-202ENST00000570380 POLR2J2Q9GZM3 115 aaKnown RBP8.38□□□□□ -1.07
CTDNEP1-202ENST00000570380 NUAK2Q9H093 628 aa8.38□□□□□ -1.07
CTDNEP1-202ENST00000570380 POLR2J3Q9H1A7 115 aaKnown RBP8.38□□□□□ -1.07
CTDNEP1-202ENST00000570380 SSU72Q9NP77 194 aaKnown RBP8.38□□□□□ -1.07
CTDNEP1-202ENST00000570380 SNTG1Q9NSN8 517 aa8.38□□□□□ -1.07
CTDNEP1-202ENST00000570380 THAP1Q9NVV9 213 aa8.38□□□□□ -1.07
CTDNEP1-202ENST00000570380 C14orf119Q9NWQ9 140 aa8.38□□□□□ -1.07
CTDNEP1-202ENST00000570380 CCDC167Q9P0B6 97 aa8.38□□□□□ -1.07
CTDNEP1-202ENST00000570380 SLC25A10Q9UBX3 287 aaPredicted RBP8.38□□□□□ -1.07
CTDNEP1-202ENST00000570380 ZNF391Q9UJN7 358 aa8.38□□□□□ -1.07
CTDNEP1-202ENST00000570380 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.37□□□□□ -1.07
CTDNEP1-202ENST00000570380 FAM90A8PA6NJQ4 464 aa8.37□□□□□ -1.07
CTDNEP1-202ENST00000570380 EFCAB9A8MZ26 197 aa8.37□□□□□ -1.07
CTDNEP1-202ENST00000570380 BHLHE40O14503 412 aa8.37□□□□□ -1.07
CTDNEP1-202ENST00000570380 IFNW1P05000 195 aa8.37□□□□□ -1.07
CTDNEP1-202ENST00000570380 NDUFB7P17568 137 aa8.37□□□□□ -1.07
CTDNEP1-202ENST00000570380 PAICSP22234 425 aaKnown RBP8.37□□□□□ -1.07
CTDNEP1-202ENST00000570380 POU1F1P28069 291 aa8.37□□□□□ -1.07
CTDNEP1-202ENST00000570380 SDHAP31040 664 aa8.37□□□□□ -1.07
CTDNEP1-202ENST00000570380 GRK5P34947 590 aa8.37□□□□□ -1.07
CTDNEP1-202ENST00000570380 OR1E2P47887 323 aa8.37□□□□□ -1.07
CTDNEP1-202ENST00000570380 SLC9A3P48764 834 aa8.37□□□□□ -1.07
CTDNEP1-202ENST00000570380 MTPNP58546 118 aa8.37□□□□□ -1.07
CTDNEP1-202ENST00000570380 MZT1Q08AG7 82 aa8.37□□□□□ -1.07
CTDNEP1-202ENST00000570380 TRAP1Q12931 704 aaKnown RBP8.37□□□□□ -1.07
CTDNEP1-202ENST00000570380 KRR1Q13601 381 aaKnown RBP8.37□□□□□ -1.07
CTDNEP1-202ENST00000570380 SNAI3Q3KNW1 292 aa8.37□□□□□ -1.07
CTDNEP1-202ENST00000570380 ETV3LQ6ZN32 361 aa8.37□□□□□ -1.07
CTDNEP1-202ENST00000570380 TSEN54Q7Z6J9 526 aaKnown RBP8.37□□□□□ -1.07
CTDNEP1-202ENST00000570380 LHFPL4Q7Z7J7 247 aa8.37□□□□□ -1.07
CTDNEP1-202ENST00000570380 CENPVQ7Z7K6 275 aaPredicted RBP8.37□□□□□ -1.07
CTDNEP1-202ENST00000570380 LINC00346Q8IVM7 164 aa8.37□□□□□ -1.07
CTDNEP1-202ENST00000570380 NRMQ8IXM6 262 aa8.37□□□□□ -1.07
CTDNEP1-202ENST00000570380 Q8NFD4 153 aa8.37□□□□□ -1.07
CTDNEP1-202ENST00000570380 RASSF5Q8WWW0 418 aa8.37□□□□□ -1.07
CTDNEP1-202ENST00000570380 GAFA1Q96PS6 74 aa8.37□□□□□ -1.07
CTDNEP1-202ENST00000570380 PITX2Q99697 317 aa8.37□□□□□ -1.07
CTDNEP1-202ENST00000570380 ATF6BQ99941 703 aa8.37□□□□□ -1.07
CTDNEP1-202ENST00000570380 PAIP2Q9BPZ3 127 aaKnown RBP8.37□□□□□ -1.07
CTDNEP1-202ENST00000570380 WDR13Q9H1Z4 485 aa8.37□□□□□ -1.07
CTDNEP1-202ENST00000570380 NMNAT1Q9HAN9 279 aaPredicted RBP8.37□□□□□ -1.07
CTDNEP1-202ENST00000570380 ELL3Q9HB65 397 aaPredicted RBP8.37□□□□□ -1.07
CTDNEP1-202ENST00000570380 PNRC2Q9NPJ4 139 aaKnown RBP8.37□□□□□ -1.07
CTDNEP1-202ENST00000570380 HAO2Q9NYQ3 351 aa8.37□□□□□ -1.07
CTDNEP1-202ENST00000570380 NKX1-2Q9UD57 310 aaPredicted RBP8.37□□□□□ -1.07
CTDNEP1-202ENST00000570380 F2RL2O00254 374 aa8.36□□□□□ -1.07
CTDNEP1-202ENST00000570380 DCTN6O00399 190 aa8.36□□□□□ -1.07
CTDNEP1-202ENST00000570380 ALDOBP05062 364 aa8.36□□□□□ -1.07
CTDNEP1-202ENST00000570380 MDH1P40925 334 aaKnown RBP8.36□□□□□ -1.07
CTDNEP1-202ENST00000570380 CENPAP49450 140 aa8.36□□□□□ -1.07
CTDNEP1-202ENST00000570380 LGALS4P56470 323 aa8.36□□□□□ -1.07
CTDNEP1-202ENST00000570380 CAV3P56539 151 aa8.36□□□□□ -1.07
CTDNEP1-202ENST00000570380 ERVFRD-1P60508 538 aa8.36□□□□□ -1.07
CTDNEP1-202ENST00000570380 GMFBP60983 142 aa8.36□□□□□ -1.07
CTDNEP1-202ENST00000570380 STX1BP61266 288 aa8.36□□□□□ -1.07
CTDNEP1-202ENST00000570380 PRKCDQ05655 676 aa8.36□□□□□ -1.07
CTDNEP1-202ENST00000570380 GLYATL3Q5SZD4 288 aa8.36□□□□□ -1.07
CTDNEP1-202ENST00000570380 SLC18B1Q6NT16 456 aa8.36□□□□□ -1.07
CTDNEP1-202ENST00000570380 C10orf99Q6UWK7 81 aa8.36□□□□□ -1.07
CTDNEP1-202ENST00000570380 UNQ9370/PRO34162Q6UXP9 181 aa8.36□□□□□ -1.07
CTDNEP1-202ENST00000570380 PTCHD4Q6ZW05 846 aa8.36□□□□□ -1.07
CTDNEP1-202ENST00000570380 CCDC80Q76M96 950 aa8.36□□□□□ -1.07
CTDNEP1-202ENST00000570380 MEPCEQ7L2J0 689 aaKnown RBP8.36□□□□□ -1.07
CTDNEP1-202ENST00000570380 DPY19L4Q7Z388 723 aa8.36□□□□□ -1.07
CTDNEP1-202ENST00000570380 LNX2Q8N448 690 aa8.36□□□□□ -1.07
CTDNEP1-202ENST00000570380 C11orf42Q8N5U0 333 aa8.36□□□□□ -1.07
CTDNEP1-202ENST00000570380 FAM156AQ8NDB6 213 aa8.36□□□□□ -1.07
CTDNEP1-202ENST00000570380 OR1M1Q8NGA1 313 aa8.36□□□□□ -1.07
CTDNEP1-202ENST00000570380 OR56B2PQ8NGI1 322 aa8.36□□□□□ -1.07
CTDNEP1-202ENST00000570380 TSSK2Q96PF2 358 aa8.36□□□□□ -1.07
CTDNEP1-202ENST00000570380 DNTTIP1Q9H147 329 aa8.36□□□□□ -1.07
CTDNEP1-202ENST00000570380 KAT8Q9H7Z6 458 aaKnown RBP8.36□□□□□ -1.07
CTDNEP1-202ENST00000570380 PALMDQ9NP74 551 aa8.36□□□□□ -1.07
CTDNEP1-202ENST00000570380 DSCAML1Q8TD84 2053 aa8.36□□□□□ -1.07
CTDNEP1-202ENST00000570380 M0R135 149 aa8.35□□□□□ -1.07
CTDNEP1-202ENST00000570380 SOCS2O14508 198 aa8.35□□□□□ -1.07
CTDNEP1-202ENST00000570380 CDC42EP2O14613 210 aa8.35□□□□□ -1.07
CTDNEP1-202ENST00000570380 CDIPTO14735 213 aa8.35□□□□□ -1.07
CTDNEP1-202ENST00000570380 GLCEO94923 617 aa8.35□□□□□ -1.07
CTDNEP1-202ENST00000570380 COX7A1P24310 79 aa8.35□□□□□ -1.07
CTDNEP1-202ENST00000570380 NAA10P41227 235 aaPredicted RBP8.35□□□□□ -1.07
CTDNEP1-202ENST00000570380 GZMMP51124 257 aa8.35□□□□□ -1.07
CTDNEP1-202ENST00000570380 TPTEP56180 551 aa8.35□□□□□ -1.07
CTDNEP1-202ENST00000570380 WDR4P57081 412 aaKnown RBP8.35□□□□□ -1.07
CTDNEP1-202ENST00000570380 MXRA7P84157 204 aa8.35□□□□□ -1.07
CTDNEP1-202ENST00000570380 ST3GAL3Q11203 375 aa8.35□□□□□ -1.07
CTDNEP1-202ENST00000570380 RFX4Q33E94 735 aa8.35□□□□□ -1.07
CTDNEP1-202ENST00000570380 KHDC1LQ5JSQ8 128 aa8.35□□□□□ -1.07
CTDNEP1-202ENST00000570380 LDLRAD2Q5SZI1 272 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms