RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 UCNP55089 124 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 RAP1BP61224 184 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 RAP1AP62834 184 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 ACTC1P68032 377 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 ACTA1P68133 377 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 SLC35A1P78382 337 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 ARG2P78540 354 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 PUDPQ08623 228 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 PDZK1IP1Q13113 114 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 PMS2P3Q13401 168 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 FHL1Q13642 323 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 C1DQ13901 141 aaKnown RBP6.13□□□□□ -1.43
CNOT1-222ENST00000570139 TGIF1Q15583 401 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 ARMCX4Q5H9R4 360 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 PDSS1Q5T2R2 415 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 AADACL4Q5VUY2 407 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 RAET1LQ5VY80 246 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 MORN5Q5VZ52 161 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 OR5M10Q6IEU7 315 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 LAIR2Q6ISS4 152 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 SLC25A25Q6KCM7 469 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 IGFL2Q6UWQ7 119 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 Q6ZPB1 254 aaPredicted RBP6.13□□□□□ -1.43
CNOT1-222ENST00000570139 KCTD8Q6ZWB6 473 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 AHSA2Q719I0 299 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 VASH2Q86V25 355 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 EGFL6Q8IUX8 553 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 PRSS35Q8N3Z0 413 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 IQCF1Q8N6M8 205 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 RBMXL3Q8N7X1 1067 aaKnown RBP6.13□□□□□ -1.43
CNOT1-222ENST00000570139 MDS2Q8NDY4 140 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 OR4A16Q8NH70 328 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 ZNF420Q8TAQ5 688 aaPredicted RBP6.13□□□□□ -1.43
CNOT1-222ENST00000570139 FNDC8Q8TC99 324 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 HAVCR2Q8TDQ0 301 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 RFT1Q96AA3 541 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 SCMH1Q96GD3 660 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 TMEM80Q96HE8 168 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 ERMAPQ96PL5 475 aaPredicted RBP6.13□□□□□ -1.43
CNOT1-222ENST00000570139 TNFRSF13CQ96RJ3 184 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 BCL7BQ9BQE9 202 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 MND1Q9BWT6 205 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 CCDC90BQ9GZT6 254 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 RIMS4Q9H426 269 aaPredicted RBP6.13□□□□□ -1.43
CNOT1-222ENST00000570139 RNF121Q9H920 327 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 PROK2Q9HC23 129 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 CHST11Q9NPF2 352 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 TIGARQ9NQ88 270 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 INIPQ9NRY2 104 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 CENPMQ9NSP4 180 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 PAQR5Q9NXK6 330 aaPredicted RBP6.13□□□□□ -1.43
CNOT1-222ENST00000570139 DIMT1Q9UNQ2 313 aaKnown RBP6.13□□□□□ -1.43
CNOT1-222ENST00000570139 MOKQ9UQ07 419 aa6.13□□□□□ -1.43
CNOT1-222ENST00000570139 EXOSC1Q9Y3B2 195 aaKnown RBP6.13□□□□□ -1.43
CNOT1-222ENST00000570139 WDFY3Q8IZQ1 3526 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 LOC102725191A0A1B0GVB3 256 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 A0A1B0GWJ7 208 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 CENPBD1B2RD01 187 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 BLOC1S5-TXNDC5H3BN57 136 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 MYL12BO14950 172 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 RRP8O43159 456 aaKnown RBP6.12□□□□□ -1.43
CNOT1-222ENST00000570139 RNF13O43567 381 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 AKAP8O43823 692 aaKnown RBP6.12□□□□□ -1.43
CNOT1-222ENST00000570139 XPNPEP2O43895 674 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 GMFGO60234 142 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 PPP1R3DO95685 299 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 RENP00797 406 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 OPN1MWP04001 364 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 RAF1P04049 648 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 IGFBP1P08833 259 aaPredicted RBP6.12□□□□□ -1.43
CNOT1-222ENST00000570139 ADORA3P0DMS8 318 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 OPN1MW2P0DN77 364 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 OPN1MW3P0DN78 364 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 GDF1P27539 372 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 GRPRP30550 384 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 RPL18Q07020 188 aaKnown RBP6.12□□□□□ -1.43
CNOT1-222ENST00000570139 ST3GAL4Q11206 333 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 GGTLC2Q14390 218 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 GK2Q14410 553 aaPredicted RBP6.12□□□□□ -1.43
CNOT1-222ENST00000570139 CARTPTQ16568 116 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 PHLDA2Q53GA4 152 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 PXDC1Q5TGL8 231 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 UBE2UQ5VVX9 321 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 NIPAL3Q6P499 406 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 DNM1P34Q6PK57 102 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 PAQR6Q6TCH4 344 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 GFRALQ6UXV0 394 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 FAM122BQ7Z309 247 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 SLC22A16Q86VW1 577 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 HEATR5AQ86XA9 2040 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 TMEM219Q86XT9 240 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 STHQ8IWL8 128 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 ODF3L1Q8IXM7 274 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 LRRC75AQ8NAA5 344 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 ZFP62Q8NB50 900 aaPredicted RBP6.12□□□□□ -1.43
CNOT1-222ENST00000570139 OR2M7Q8NG81 312 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 RORBQ92753 470 aa6.12□□□□□ -1.43
CNOT1-222ENST00000570139 JSRP1Q96MG2 331 aaPredicted RBP6.12□□□□□ -1.43
CNOT1-222ENST00000570139 URM1Q9BTM9 101 aaKnown RBP6.12□□□□□ -1.43
CNOT1-222ENST00000570139 SF3B5Q9BWJ5 86 aaKnown RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms