RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 UQCC2Q9BRT2 126 aa4.11□□□□□ -1.75
CNOT1-219ENST00000569882 FUZQ9BT04 418 aa4.11□□□□□ -1.75
CNOT1-219ENST00000569882 DGCR6LQ9BY27 220 aa4.11□□□□□ -1.75
CNOT1-219ENST00000569882 CADM1Q9BY67 442 aaKnown RBP4.11□□□□□ -1.75
CNOT1-219ENST00000569882 PLA2G12AQ9BZM1 189 aa4.11□□□□□ -1.75
CNOT1-219ENST00000569882 WDR76Q9H967 626 aa4.11□□□□□ -1.75
CNOT1-219ENST00000569882 CMC2Q9NRP2 79 aa4.11□□□□□ -1.75
CNOT1-219ENST00000569882 ZNF275Q9NSD4 429 aaPredicted RBP4.11□□□□□ -1.75
CNOT1-219ENST00000569882 IMPAD1Q9NX62 359 aa4.11□□□□□ -1.75
CNOT1-219ENST00000569882 PPP1R14DQ9NXH3 145 aa4.11□□□□□ -1.75
CNOT1-219ENST00000569882 TVP23BQ9NYZ1 205 aa4.11□□□□□ -1.75
CNOT1-219ENST00000569882 DNAJC27Q9NZQ0 273 aa4.11□□□□□ -1.75
CNOT1-219ENST00000569882 ATPIF1Q9UII2 106 aa4.11□□□□□ -1.75
CNOT1-219ENST00000569882 PURGQ9UJV8 347 aaKnown RBP4.11□□□□□ -1.75
CNOT1-219ENST00000569882 IKZF2Q9UKS7 526 aa4.11□□□□□ -1.75
CNOT1-219ENST00000569882 PPP1R3CQ9UQK1 317 aa4.11□□□□□ -1.75
CNOT1-219ENST00000569882 PRELID1Q9Y255 219 aa4.11□□□□□ -1.75
CNOT1-219ENST00000569882 AP4S1Q9Y587 144 aa4.11□□□□□ -1.75
CNOT1-219ENST00000569882 LHFPL6Q9Y693 200 aa4.11□□□□□ -1.75
CNOT1-219ENST00000569882 COMMD3-BMI1R4GMX3 469 aa4.11□□□□□ -1.75
CNOT1-219ENST00000569882 CELSR1Q9NYQ6 3014 aa4.11□□□□□ -1.75
CNOT1-219ENST00000569882 HIVEP1P15822 2718 aa4.11□□□□□ -1.75
CNOT1-219ENST00000569882 CSMD1Q96PZ7 3565 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 WNK2Q9Y3S1 2297 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 IGLV3-9A0A075B6K5 115 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 IGHV4-61A0A0C4DH41 118 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 IGHV3-64DA0A0J9YX35 117 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 TMEM129A0AVI4 362 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 B4DSR2 109 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 DCTN6O00399 190 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 PRODHO43272 600 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 XRCC2O43543 280 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 IGHV1-46P01743 117 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 SCG5P05408 212 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 LYNP07948 512 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 SBK2P0C263 348 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 IGHV4-31P0DP07 118 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 GAAP10253 952 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 CLUP10909 449 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 SLC2A1P11166 492 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 CFL1P23528 166 aaKnown RBP4.1□□□□□ -1.75
CNOT1-219ENST00000569882 IGFBP5P24593 272 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 GIFP27352 417 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 NAA10P41227 235 aaPredicted RBP4.1□□□□□ -1.75
CNOT1-219ENST00000569882 RPS27P42677 84 aaKnown RBP4.1□□□□□ -1.75
CNOT1-219ENST00000569882 CX3CR1P49238 355 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 ETV1P50549 477 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 SLC25A1P53007 311 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 ACTR3P61158 418 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 ESRRGP62508 458 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 MRPS11P82912 194 aaKnown RBP4.1□□□□□ -1.75
CNOT1-219ENST00000569882 CD83Q01151 205 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 PSG7Q13046 419 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 TRIP10Q15642 601 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 SNCBQ16143 134 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 OR2T2Q6IF00 324 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 LIN54Q6MZP7 749 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 SLC18B1Q6NT16 456 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 ACSM5Q6NUN0 579 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 FAHD2BQ6P2I3 314 aaPredicted RBP4.1□□□□□ -1.75
CNOT1-219ENST00000569882 KCTD18Q6PI47 426 aaPredicted RBP4.1□□□□□ -1.75
CNOT1-219ENST00000569882 DRAM2Q6UX65 266 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 KCTD8Q6ZWB6 473 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 CXXC5Q7LFL8 322 aaKnown RBP4.1□□□□□ -1.75
CNOT1-219ENST00000569882 DPY19L4Q7Z388 723 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 ZBTB46Q86UZ6 589 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 HS3ST5Q8IZT8 346 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 SPICQ8N5J4 248 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 TEX29Q8N6K0 151 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 BOLLQ8N9W6 283 aaKnown RBP4.1□□□□□ -1.75
CNOT1-219ENST00000569882 ZBTB8BQ8NAP8 495 aaPredicted RBP4.1□□□□□ -1.75
CNOT1-219ENST00000569882 OR10AD1Q8NGE0 317 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 OR8D4Q8NGM9 314 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 OR4Q3Q8NH05 313 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 ITLN1Q8WWA0 313 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 GTF3AQ92664 365 aaKnown RBP4.1□□□□□ -1.75
CNOT1-219ENST00000569882 SLCO4A1Q96BD0 722 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 SLC7A6OSQ96CW6 309 aaPredicted RBP4.1□□□□□ -1.75
CNOT1-219ENST00000569882 SLAMF6Q96DU3 332 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 ZMYND19Q96E35 227 aaPredicted RBP4.1□□□□□ -1.75
CNOT1-219ENST00000569882 FAHD2AQ96GK7 314 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 MARS2Q96GW9 593 aaKnown RBP4.1□□□□□ -1.75
CNOT1-219ENST00000569882 PGAM5Q96HS1 289 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 OR2V2Q96R30 315 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 ADAT1Q9BUB4 502 aaKnown RBP4.1□□□□□ -1.75
CNOT1-219ENST00000569882 OR10A2Q9H208 303 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 SEMA6AQ9H2E6 1030 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 RIBC2Q9H4K1 309 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 OPA3Q9H6K4 179 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 MED20Q9H944 212 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 TMEM100Q9NV29 134 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 VNN3Q9NY84 501 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 TMEFF2Q9UIK5 374 aaPredicted RBP4.1□□□□□ -1.75
CNOT1-219ENST00000569882 STARD10Q9Y365 291 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 MALRD1Q5VYJ5 2156 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 MTORP42345 2549 aa4.1□□□□□ -1.75
CNOT1-219ENST00000569882 MAP1AP78559 2803 aaPredicted RBP4.09□□□□□ -1.75
CNOT1-219ENST00000569882 YLPM1P49750 1951 aaKnown RBP4.09□□□□□ -1.75
CNOT1-219ENST00000569882 DOCK11Q5JSL3 2073 aa4.09□□□□□ -1.75
CNOT1-219ENST00000569882 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.09□□□□□ -1.752e-8■■■■□ 20.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms