RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 ANXA3P12429 323 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 ZNF20P17024 532 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 NAT1P18440 290 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 CRYGSP22914 178 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 THBS4P35443 961 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 ZNF93P35789 620 aaPredicted RBP4.72□□□□□ -1.65
SF3B3-213ENST00000569687 CASRP41180 1078 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 SELENOPP49908 381 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 TAS2R19P59542 299 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 PCBD1P61457 104 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 MRPS15P82914 257 aaKnown RBP4.72□□□□□ -1.65
SF3B3-213ENST00000569687 ID3Q02535 119 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 PMPCAQ10713 525 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 RAB35Q15286 201 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 SF3B4Q15427 424 aaKnown RBP eCLIP4.72□□□□□ -1.65
SF3B3-213ENST00000569687 TRIP6Q15654 476 aaKnown RBP4.72□□□□□ -1.65
SF3B3-213ENST00000569687 PNLIPRP3Q17RR3 467 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 PCGF3Q3KNV8 242 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 LINC00303Q3SY05 128 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 ZNF260Q3ZCT1 412 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 CDNFQ49AH0 187 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 CCDC157Q569K6 752 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 RNASE12Q5GAN4 147 aaKnown RBP4.72□□□□□ -1.65
SF3B3-213ENST00000569687 ABLIM2Q6H8Q1 611 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 SPINK14Q6IE38 97 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 STEAP1BQ6NZ63 245 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 DHRS13Q6UX07 377 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 DRAM2Q6UX65 266 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 FAM57BQ71RH2 274 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 ZNF627Q7L945 461 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 AAED1Q7RTV5 226 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 ANGPTL5Q86XS5 388 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 GABRG1Q8N1C3 465 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 GPR137CQ8N3F9 429 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 JAGN1Q8N5M9 183 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 ZNF283Q8N7M2 679 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 ASCC1Q8N9N2 400 aaKnown RBP4.72□□□□□ -1.65
SF3B3-213ENST00000569687 GALNT11Q8NCW6 608 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 DEFB124Q8NES8 71 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 OR2M7Q8NG81 312 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 OR52H1Q8NGJ2 320 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 OR10D3Q8NH80 312 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 KCNG3Q8TAE7 436 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 GIMAP1Q8WWP7 306 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 ASB13Q8WXK3 278 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 PP6455Q8WZ26 134 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 SPTSSAQ969W0 71 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 FAM46BQ96A09 425 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 CPNE4Q96A23 557 aaPredicted RBP4.72□□□□□ -1.65
SF3B3-213ENST00000569687 SGK3Q96BR1 496 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 FBXO17Q96EF6 278 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 PGAM5Q96HS1 289 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 FER1L6-AS2Q96M78 137 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 C1orf147Q96MC9 270 aaPredicted RBP4.72□□□□□ -1.65
SF3B3-213ENST00000569687 SFXN2Q96NB2 322 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 TMEM246Q9BRR3 403 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 OR10A4Q9H209 315 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 GPN1Q9HCN4 374 aaPredicted RBP4.72□□□□□ -1.65
SF3B3-213ENST00000569687 ACKR4Q9NPB9 350 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.72□□□□□ -1.65
SF3B3-213ENST00000569687 TMEM38BQ9NVV0 291 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 PARPBPQ9NWS1 579 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 PAQR5Q9NXK6 330 aaPredicted RBP4.72□□□□□ -1.65
SF3B3-213ENST00000569687 SLC2A8Q9NY64 477 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 ZNF224Q9NZL3 707 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 MRPL15Q9P015 296 aaKnown RBP4.72□□□□□ -1.65
SF3B3-213ENST00000569687 ABI3Q9P2A4 366 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 UPB1Q9UBR1 384 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 B4GALT7Q9UBV7 327 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 ZNF391Q9UJN7 358 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 SCP2D1Q9UJQ7 156 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 ANAPC10Q9UM13 185 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 FLVCR2Q9UPI3 526 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 TIMM10BQ9Y5J6 103 aa4.72□□□□□ -1.65
SF3B3-213ENST00000569687 GPR179Q6PRD1 2367 aa4.71□□□□□ -1.65
SF3B3-213ENST00000569687 CFAP54Q96N23 3096 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 IGHV3-15A0A0B4J1V0 119 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 IGKV1-9A0A0C4DH69 117 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 OR14I1A6ND48 311 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 OR5H15A6NDH6 313 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 ZNF724A8MTY0 619 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 E9PLN8 166 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 STMND1H3BQB6 276 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 KLRC4-KLRK1H3BQV0 150 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 PYCARD-AS1I3L0S3 204 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 ARPC1BO15143 372 aaKnown RBP4.71□□□□□ -1.66
SF3B3-213ENST00000569687 SYNGR3O43761 229 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 CXCL13O43927 109 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 CA11O75493 328 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 MTRF1O75570 445 aaKnown RBP4.71□□□□□ -1.66
SF3B3-213ENST00000569687 DHRS3O75911 302 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 KDM4BO94953 1096 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 SP1P08047 785 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 GTF2F2P13984 249 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 ABOP16442 354 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 CXCL3P19876 107 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 TBPP20226 339 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 S100A1P23297 94 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 GDF1P27539 372 aa4.71□□□□□ -1.66
SF3B3-213ENST00000569687 RCVRNP35243 200 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms