RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 PTX4Q96A99 478 aa19.58■□□□□ 0.72
VCPKMT-205ENST00000569518 NEDD4LQ96PU5 975 aa19.58■□□□□ 0.72
VCPKMT-205ENST00000569518 CIB4A0PJX0 185 aa19.57■□□□□ 0.72
VCPKMT-205ENST00000569518 PRF1P14222 555 aa19.57■□□□□ 0.72
VCPKMT-205ENST00000569518 STOMP27105 288 aa19.57■□□□□ 0.72
VCPKMT-205ENST00000569518 BCAP31P51572 246 aa19.57■□□□□ 0.72
VCPKMT-205ENST00000569518 UCNP55089 124 aa19.57■□□□□ 0.72
VCPKMT-205ENST00000569518 TAS2R20P59543 309 aa19.57■□□□□ 0.72
VCPKMT-205ENST00000569518 FOXF2Q12947 444 aa19.57■□□□□ 0.72
VCPKMT-205ENST00000569518 RTL6Q6ICC9 239 aa19.57■□□□□ 0.72
VCPKMT-205ENST00000569518 VWA1Q6PCB0 445 aa19.57■□□□□ 0.72
VCPKMT-205ENST00000569518 FAM180AQ6UWF9 173 aa19.57■□□□□ 0.72
VCPKMT-205ENST00000569518 Q8NA96 180 aa19.57■□□□□ 0.72
VCPKMT-205ENST00000569518 SEMA6DQ8NFY4 1073 aa19.57■□□□□ 0.72
VCPKMT-205ENST00000569518 SNRNP27Q8WVK2 155 aaKnown RBP19.57■□□□□ 0.72
VCPKMT-205ENST00000569518 RAXQ9Y2V3 346 aa19.57■□□□□ 0.72
VCPKMT-205ENST00000569518 IGF2RP11717 2491 aa19.57■□□□□ 0.72
VCPKMT-205ENST00000569518 hCG_38984A0A1B0GV85 526 aa19.56■□□□□ 0.72
VCPKMT-205ENST00000569518 CD3GP09693 182 aa19.56■□□□□ 0.72
VCPKMT-205ENST00000569518 QRFPP83859 136 aa19.56■□□□□ 0.72
VCPKMT-205ENST00000569518 SF3B4Q15427 424 aaKnown RBP eCLIP19.56■□□□□ 0.72
VCPKMT-205ENST00000569518 UBE2V2Q15819 145 aa19.56■□□□□ 0.72
VCPKMT-205ENST00000569518 CRIP3Q6Q6R5 217 aa19.56■□□□□ 0.72
VCPKMT-205ENST00000569518 POM121L2Q96KW2 1035 aa19.56■□□□□ 0.72
VCPKMT-205ENST00000569518 ZNF75AQ96N20 296 aa19.56■□□□□ 0.72
VCPKMT-205ENST00000569518 AUNIPQ9H7T9 357 aa19.56■□□□□ 0.72
VCPKMT-205ENST00000569518 GGT3PA6NGU5 568 aa19.55■□□□□ 0.72
VCPKMT-205ENST00000569518 LYRM1O43325 122 aa19.55■□□□□ 0.72
VCPKMT-205ENST00000569518 XRCC2O43543 280 aa19.55■□□□□ 0.72
VCPKMT-205ENST00000569518 TNFSF13O75888 250 aa19.55■□□□□ 0.72
VCPKMT-205ENST00000569518 KDM4BO94953 1096 aa19.55■□□□□ 0.72
VCPKMT-205ENST00000569518 BPNT1O95861 308 aa19.55■□□□□ 0.72
VCPKMT-205ENST00000569518 COX5AP20674 150 aa19.55■□□□□ 0.72
VCPKMT-205ENST00000569518 MAP2K3P46734 347 aa19.55■□□□□ 0.72
VCPKMT-205ENST00000569518 ZNF92Q03936 586 aa19.55■□□□□ 0.72
VCPKMT-205ENST00000569518 GSG1Q2KHT4 349 aa19.55■□□□□ 0.72
VCPKMT-205ENST00000569518 C15orf40Q8WUR7 153 aa19.55■□□□□ 0.72
VCPKMT-205ENST00000569518 NANOS1Q8WY41 292 aaKnown RBP19.55■□□□□ 0.72
VCPKMT-205ENST00000569518 SPACA5Q96QH8 159 aa19.55■□□□□ 0.72
VCPKMT-205ENST00000569518 FBLN5Q9UBX5 448 aa19.55■□□□□ 0.72
VCPKMT-205ENST00000569518 FAM215AQ9Y5M1 114 aa19.55■□□□□ 0.72
VCPKMT-205ENST00000569518 C5orf49A4QMS7 147 aa19.55■□□□□ 0.72
VCPKMT-205ENST00000569518 WDR1O75083 606 aa19.55■□□□□ 0.72
VCPKMT-205ENST00000569518 RAB6AP20340 208 aa19.55■□□□□ 0.72
VCPKMT-205ENST00000569518 PTGER4P35408 488 aa19.55■□□□□ 0.72
VCPKMT-205ENST00000569518 INPP1P49441 399 aa19.55■□□□□ 0.72
VCPKMT-205ENST00000569518 FAM3AP98173 230 aa19.55■□□□□ 0.72
VCPKMT-205ENST00000569518 TGFBR3Q03167 851 aa19.55■□□□□ 0.72
VCPKMT-205ENST00000569518 OR8B8Q15620 311 aa19.55■□□□□ 0.72
VCPKMT-205ENST00000569518 ZNF57Q68EA5 555 aaPredicted RBP19.55■□□□□ 0.72
VCPKMT-205ENST00000569518 DNM1P46Q6ZS02 220 aa19.55■□□□□ 0.72
VCPKMT-205ENST00000569518 AKAP1Q92667 903 aaKnown RBP eCLIP19.55■□□□□ 0.72
VCPKMT-205ENST00000569518 GCDHQ92947 438 aaPredicted RBP19.55■□□□□ 0.72
VCPKMT-205ENST00000569518 ZC3HAV1LQ96H79 300 aaKnown RBP19.55■□□□□ 0.72
VCPKMT-205ENST00000569518 BOD1Q96IK1 185 aa19.55■□□□□ 0.72
VCPKMT-205ENST00000569518 PLSCR4Q9NRQ2 329 aa19.55■□□□□ 0.72
VCPKMT-205ENST00000569518 RBFOX1Q9NWB1 397 aaKnown RBP19.55■□□□□ 0.72
VCPKMT-205ENST00000569518 ATMQ13315 3056 aa19.54■□□□□ 0.72
VCPKMT-205ENST00000569518 GABARAPH6UMI1 98 aa19.54■□□□□ 0.72
VCPKMT-205ENST00000569518 HCKP08631 526 aa19.54■□□□□ 0.72
VCPKMT-205ENST00000569518 FAM157BP0CG42 384 aa19.54■□□□□ 0.72
VCPKMT-205ENST00000569518 GSK3AP49840 483 aa19.54■□□□□ 0.72
VCPKMT-205ENST00000569518 MRPS10P82664 201 aaKnown RBP19.54■□□□□ 0.72
VCPKMT-205ENST00000569518 PLP2Q04941 152 aa19.54■□□□□ 0.72
VCPKMT-205ENST00000569518 RIPPLY1Q0D2K3 151 aa19.54■□□□□ 0.72
VCPKMT-205ENST00000569518 RNASE12Q5GAN4 147 aaKnown RBP19.54■□□□□ 0.72
VCPKMT-205ENST00000569518 MDP1Q86V88 176 aa19.54■□□□□ 0.72
VCPKMT-205ENST00000569518 C1orf147Q96MC9 270 aaPredicted RBP19.54■□□□□ 0.72
VCPKMT-205ENST00000569518 RBMX2Q9Y388 322 aaKnown RBP19.54■□□□□ 0.72
VCPKMT-205ENST00000569518 PIEZO1Q92508 2521 aa19.54■□□□□ 0.72
VCPKMT-205ENST00000569518 TOXO94900 526 aa19.53■□□□□ 0.72
VCPKMT-205ENST00000569518 CGAP01215 116 aa19.53■□□□□ 0.72
VCPKMT-205ENST00000569518 CCL2P13500 99 aa19.53■□□□□ 0.72
VCPKMT-205ENST00000569518 UNC119Q13432 240 aa19.53■□□□□ 0.72
VCPKMT-205ENST00000569518 TMEM42Q69YG0 159 aa19.53■□□□□ 0.72
VCPKMT-205ENST00000569518 OR10K2Q6IF99 312 aa19.53■□□□□ 0.72
VCPKMT-205ENST00000569518 PAQR4Q8N4S7 273 aaPredicted RBP19.53■□□□□ 0.72
VCPKMT-205ENST00000569518 CELF2-AS1Q8N7Q2 184 aa19.53■□□□□ 0.72
VCPKMT-205ENST00000569518 OR52I2Q8NH67 350 aa19.53■□□□□ 0.72
VCPKMT-205ENST00000569518 ATG5Q9H1Y0 275 aa19.53■□□□□ 0.72
VCPKMT-205ENST00000569518 ZNF71Q9NQZ8 489 aaPredicted RBP19.53■□□□□ 0.72
VCPKMT-205ENST00000569518 DIABLOQ9NR28 239 aa19.53■□□□□ 0.72
VCPKMT-205ENST00000569518 INTS1Q8N201 2190 aaKnown RBP19.53■□□□□ 0.72
VCPKMT-205ENST00000569518 PFDN1O60925 122 aa19.53■□□□□ 0.72
VCPKMT-205ENST00000569518 TPOP07202 933 aa19.53■□□□□ 0.72
VCPKMT-205ENST00000569518 VSIG8P0DPA2 414 aa19.53■□□□□ 0.72
VCPKMT-205ENST00000569518 KIR2DL3P43628 341 aa19.53■□□□□ 0.72
VCPKMT-205ENST00000569518 TDGF1P3P51864 188 aa19.53■□□□□ 0.72
VCPKMT-205ENST00000569518 GABRA6Q16445 453 aa19.53■□□□□ 0.72
VCPKMT-205ENST00000569518 MZT2BQ6NZ67 158 aa19.53■□□□□ 0.72
VCPKMT-205ENST00000569518 MTFR2Q6P444 385 aa19.53■□□□□ 0.72
VCPKMT-205ENST00000569518 ANGPTL5Q86XS5 388 aa19.53■□□□□ 0.72
VCPKMT-205ENST00000569518 CCDC36Q8IYA8 594 aa19.53■□□□□ 0.72
VCPKMT-205ENST00000569518 GABRG1Q8N1C3 465 aa19.53■□□□□ 0.72
VCPKMT-205ENST00000569518 STARD4Q96DR4 205 aa19.53■□□□□ 0.72
VCPKMT-205ENST00000569518 MYO7BQ6PIF6 2116 aa19.53■□□□□ 0.72
VCPKMT-205ENST00000569518 FIGNL2A6NMB9 653 aa19.52■□□□□ 0.72
VCPKMT-205ENST00000569518 RAD51DO75771 328 aa19.52■□□□□ 0.72
VCPKMT-205ENST00000569518 LYZL6O75951 148 aa19.52■□□□□ 0.72
VCPKMT-205ENST00000569518 CRHP06850 196 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms