RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 IFT27Q9BW83 186 aa12.93□□□□□ -0.34
HERPUD1-215ENST00000568676 FAM234AQ9H0X4 552 aa12.93□□□□□ -0.34
HERPUD1-215ENST00000568676 SAMD4AQ9UPU9 718 aaKnown RBP12.93□□□□□ -0.34
HERPUD1-215ENST00000568676 OR6C68A6NDL8 312 aa12.92□□□□□ -0.34
HERPUD1-215ENST00000568676 NME4O00746 187 aa12.92□□□□□ -0.34
HERPUD1-215ENST00000568676 GSK3BP49841 420 aa12.92□□□□□ -0.34
HERPUD1-215ENST00000568676 UBE2E1P51965 193 aa12.92□□□□□ -0.34
HERPUD1-215ENST00000568676 SEC23BQ15437 767 aa12.92□□□□□ -0.34
HERPUD1-215ENST00000568676 SNCBQ16143 134 aa12.92□□□□□ -0.34
HERPUD1-215ENST00000568676 WDR38Q5JTN6 314 aa12.92□□□□□ -0.34
HERPUD1-215ENST00000568676 ATPAF1Q5TC12 328 aaPredicted RBP12.92□□□□□ -0.34
HERPUD1-215ENST00000568676 TET2Q6N021 2002 aaPredicted RBP12.92□□□□□ -0.34
HERPUD1-215ENST00000568676 OR56B2PQ8NGI1 322 aa12.92□□□□□ -0.34
HERPUD1-215ENST00000568676 OR2T4Q8NH00 348 aa12.92□□□□□ -0.34
HERPUD1-215ENST00000568676 LRRC29Q8WV35 223 aa12.92□□□□□ -0.34
HERPUD1-215ENST00000568676 SPSB4Q96A44 273 aa12.92□□□□□ -0.34
HERPUD1-215ENST00000568676 C7orf34Q96L11 122 aa12.92□□□□□ -0.34
HERPUD1-215ENST00000568676 KCNJ15Q99712 375 aa12.92□□□□□ -0.34
HERPUD1-215ENST00000568676 KCTD14Q9BQ13 255 aaPredicted RBP12.92□□□□□ -0.34
HERPUD1-215ENST00000568676 DCTN5Q9BTE1 182 aa12.92□□□□□ -0.34
HERPUD1-215ENST00000568676 NSRP1Q9H0G5 558 aaKnown RBP12.92□□□□□ -0.34
HERPUD1-215ENST00000568676 SP140LQ9H930 580 aa12.92□□□□□ -0.34
HERPUD1-215ENST00000568676 RAB18Q9NP72 206 aa12.92□□□□□ -0.34
HERPUD1-215ENST00000568676 MRPL22Q9NWU5 206 aaKnown RBP12.92□□□□□ -0.34
HERPUD1-215ENST00000568676 CD300AQ9UGN4 299 aa12.92□□□□□ -0.34
HERPUD1-215ENST00000568676 G3V4G9 280 aa12.91□□□□□ -0.34
HERPUD1-215ENST00000568676 M0R1W7 72 aa12.91□□□□□ -0.34
HERPUD1-215ENST00000568676 CFL1P23528 166 aaKnown RBP12.91□□□□□ -0.34
HERPUD1-215ENST00000568676 KIR2DS4P43632 304 aa12.91□□□□□ -0.34
HERPUD1-215ENST00000568676 PGBD2Q6P3X8 592 aa12.91□□□□□ -0.34
HERPUD1-215ENST00000568676 HACD2Q6Y1H2 254 aa12.91□□□□□ -0.34
HERPUD1-215ENST00000568676 DPY19L4Q7Z388 723 aa12.91□□□□□ -0.34
HERPUD1-215ENST00000568676 ZDHHC21Q8IVQ6 265 aa12.91□□□□□ -0.34
HERPUD1-215ENST00000568676 FTMTQ8N4E7 242 aa12.91□□□□□ -0.34
HERPUD1-215ENST00000568676 CYB561A3Q8NBI2 242 aa12.91□□□□□ -0.34
HERPUD1-215ENST00000568676 BEND2Q8NDZ0 799 aa12.91□□□□□ -0.34
HERPUD1-215ENST00000568676 SDR9C7Q8NEX9 313 aa12.91□□□□□ -0.34
HERPUD1-215ENST00000568676 CCL13Q99616 98 aa12.91□□□□□ -0.34
HERPUD1-215ENST00000568676 COPS4Q9BT78 406 aa12.91□□□□□ -0.34
HERPUD1-215ENST00000568676 PPA2Q9H2U2 334 aa12.91□□□□□ -0.34
HERPUD1-215ENST00000568676 RANBP3Q9H6Z4 567 aaPredicted RBP12.91□□□□□ -0.34
HERPUD1-215ENST00000568676 METTL8Q9H825 291 aaKnown RBP12.91□□□□□ -0.34
HERPUD1-215ENST00000568676 EFCAB1Q9HAE3 211 aa12.91□□□□□ -0.34
HERPUD1-215ENST00000568676 SIRT7Q9NRC8 400 aa12.91□□□□□ -0.34
HERPUD1-215ENST00000568676 IGHV3OR15-7A0A075B7D8 119 aa12.9□□□□□ -0.34
HERPUD1-215ENST00000568676 MEIOCA2RUB1 952 aa12.9□□□□□ -0.34
HERPUD1-215ENST00000568676 XPNPEP2O43895 674 aa12.9□□□□□ -0.34
HERPUD1-215ENST00000568676 GMNNO75496 209 aa12.9□□□□□ -0.34
HERPUD1-215ENST00000568676 GADD45GO95257 159 aa12.9□□□□□ -0.34
HERPUD1-215ENST00000568676 SAA4P35542 130 aa12.9□□□□□ -0.34
HERPUD1-215ENST00000568676 SLC15A1P46059 708 aa12.9□□□□□ -0.34
HERPUD1-215ENST00000568676 TGM4P49221 684 aa12.9□□□□□ -0.34
HERPUD1-215ENST00000568676 BLMHQ13867 455 aa12.9□□□□□ -0.34
HERPUD1-215ENST00000568676 TAF13Q15543 124 aa12.9□□□□□ -0.34
HERPUD1-215ENST00000568676 AANATQ16613 207 aa12.9□□□□□ -0.34
HERPUD1-215ENST00000568676 RPL13AP3Q6NVV1 102 aa12.9□□□□□ -0.34
HERPUD1-215ENST00000568676 C8orf82Q6P1X6 216 aaPredicted RBP12.9□□□□□ -0.34
HERPUD1-215ENST00000568676 WDR82Q6UXN9 313 aa12.9□□□□□ -0.34
HERPUD1-215ENST00000568676 Q6ZPA2 131 aa12.9□□□□□ -0.34
HERPUD1-215ENST00000568676 DCXRQ7Z4W1 244 aa12.9□□□□□ -0.34
HERPUD1-215ENST00000568676 C11orf53Q8IXP5 236 aa12.9□□□□□ -0.34
HERPUD1-215ENST00000568676 Q8N7P7 452 aa12.9□□□□□ -0.34
HERPUD1-215ENST00000568676 PROKR2Q8NFJ6 384 aa12.9□□□□□ -0.34
HERPUD1-215ENST00000568676 OR1M1Q8NGA1 313 aa12.9□□□□□ -0.34
HERPUD1-215ENST00000568676 OR4C13Q8NGP0 309 aa12.9□□□□□ -0.34
HERPUD1-215ENST00000568676 OR52J3Q8NH60 311 aa12.9□□□□□ -0.34
HERPUD1-215ENST00000568676 CFHR4Q92496 578 aa12.9□□□□□ -0.34
HERPUD1-215ENST00000568676 TNFRSF14Q92956 283 aa12.9□□□□□ -0.34
HERPUD1-215ENST00000568676 MED30Q96HR3 178 aa12.9□□□□□ -0.34
HERPUD1-215ENST00000568676 SEMA6AQ9H2E6 1030 aa12.9□□□□□ -0.34
HERPUD1-215ENST00000568676 DCAF13Q9NV06 445 aaKnown RBP12.9□□□□□ -0.34
HERPUD1-215ENST00000568676 GMPR2Q9P2T1 348 aaKnown RBP12.9□□□□□ -0.34
HERPUD1-215ENST00000568676 MAB21L2Q9Y586 359 aa12.9□□□□□ -0.34
HERPUD1-215ENST00000568676 NKX6-3A6NJ46 265 aa12.89□□□□□ -0.35
HERPUD1-215ENST00000568676 ZNF878C9JN71 531 aa12.89□□□□□ -0.35
HERPUD1-215ENST00000568676 APOC1P02654 83 aa12.89□□□□□ -0.35
HERPUD1-215ENST00000568676 EFNB2P52799 333 aa12.89□□□□□ -0.35
HERPUD1-215ENST00000568676 GRB2P62993 217 aaKnown RBP12.89□□□□□ -0.35
HERPUD1-215ENST00000568676 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.89□□□□□ -0.35
HERPUD1-215ENST00000568676 POU4F2Q12837 409 aa12.89□□□□□ -0.35
HERPUD1-215ENST00000568676 FAM189A2Q15884 450 aa12.89□□□□□ -0.35
HERPUD1-215ENST00000568676 LIAT1Q6ZQX7 453 aa12.89□□□□□ -0.35
HERPUD1-215ENST00000568676 FAM216BQ8N7L0 139 aa12.89□□□□□ -0.35
HERPUD1-215ENST00000568676 OR10Z1Q8NGY1 313 aa12.89□□□□□ -0.35
HERPUD1-215ENST00000568676 OR2T6Q8NHC8 308 aa12.89□□□□□ -0.35
HERPUD1-215ENST00000568676 TLNRD1Q9H1K6 362 aa12.89□□□□□ -0.35
HERPUD1-215ENST00000568676 FN3KQ9H479 309 aa12.89□□□□□ -0.35
HERPUD1-215ENST00000568676 TOR3AQ9H497 397 aa12.89□□□□□ -0.35
HERPUD1-215ENST00000568676 ABCB9Q9NP78 766 aa12.89□□□□□ -0.35
HERPUD1-215ENST00000568676 FGFR1OP2Q9NVK5 253 aa12.89□□□□□ -0.35
HERPUD1-215ENST00000568676 HAO2Q9NYQ3 351 aa12.89□□□□□ -0.35
HERPUD1-215ENST00000568676 ABCD2Q9UBJ2 740 aa12.89□□□□□ -0.35
HERPUD1-215ENST00000568676 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.88□□□□□ -0.35
HERPUD1-215ENST00000568676 ACOT8O14734 319 aa12.88□□□□□ -0.35
HERPUD1-215ENST00000568676 COX4I1P13073 169 aa12.88□□□□□ -0.35
HERPUD1-215ENST00000568676 NCK1P16333 377 aa12.88□□□□□ -0.35
HERPUD1-215ENST00000568676 GNALP38405 381 aa12.88□□□□□ -0.35
HERPUD1-215ENST00000568676 GSSP48637 474 aa12.88□□□□□ -0.35
HERPUD1-215ENST00000568676 PRKXP51817 358 aa12.88□□□□□ -0.35
HERPUD1-215ENST00000568676 BLVRAP53004 296 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms