RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 OR10H4Q8NGA5 316 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 OR2T27Q8NH04 317 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 CLDND2Q8NHS1 167 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 SPRYD4Q8WW59 207 aaPredicted RBP8.27□□□□□ -1.09
CLK3-220ENST00000567992 CCL17Q92583 94 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 PPP1R14AQ96A00 147 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 RNFT2Q96EX2 444 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 TBX5Q99593 518 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 ADAT1Q9BUB4 502 aaKnown RBP8.27□□□□□ -1.09
CLK3-220ENST00000567992 RGCCQ9H4X1 137 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 PPP1R3EQ9H7J1 279 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 SP140LQ9H930 580 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 G6PC2Q9NQR9 355 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 C8orf4Q9NR00 106 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 TMEM106BQ9NUM4 274 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 NUFIP1Q9UHK0 495 aaKnown RBP8.27□□□□□ -1.09
CLK3-220ENST00000567992 IKZF2Q9UKS7 526 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.27□□□□□ -1.09
CLK3-220ENST00000567992 WIPI2Q9Y4P8 454 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 IGHV3-64DA0A0J9YX35 117 aa8.26□□□□□ -1.09
CLK3-220ENST00000567992 A0A0U1RQV5 110 aa8.26□□□□□ -1.09
CLK3-220ENST00000567992 ACOD1A6NK06 481 aa8.26□□□□□ -1.09
CLK3-220ENST00000567992 CLDN25C9JDP6 229 aa8.26□□□□□ -1.09
CLK3-220ENST00000567992 INAFM1C9JVW0 142 aa8.26□□□□□ -1.09
CLK3-220ENST00000567992 CLIC3O95833 236 aa8.26□□□□□ -1.09
CLK3-220ENST00000567992 IGHV2-70P01814 119 aa8.26□□□□□ -1.09
CLK3-220ENST00000567992 TTRP02766 147 aa8.26□□□□□ -1.09
CLK3-220ENST00000567992 DBTP11182 482 aaKnown RBP8.26□□□□□ -1.09
CLK3-220ENST00000567992 HOXB4P17483 251 aaPredicted RBP8.26□□□□□ -1.09
CLK3-220ENST00000567992 RIDAP52758 137 aaKnown RBP8.26□□□□□ -1.09
CLK3-220ENST00000567992 LMO4P61968 165 aa8.26□□□□□ -1.09
CLK3-220ENST00000567992 ADARB1P78563 741 aaKnown RBP8.26□□□□□ -1.09
CLK3-220ENST00000567992 MVKQ03426 396 aa8.26□□□□□ -1.09
CLK3-220ENST00000567992 ZNF829Q3KNS6 432 aaPredicted RBP8.26□□□□□ -1.09
CLK3-220ENST00000567992 PRAMEF6Q5VXH4 476 aa8.26□□□□□ -1.09
CLK3-220ENST00000567992 KRT74Q7RTS7 529 aa8.26□□□□□ -1.09
CLK3-220ENST00000567992 WDR86Q86TI4 376 aa8.26□□□□□ -1.09
CLK3-220ENST00000567992 MOGAT3Q86VF5 341 aa8.26□□□□□ -1.09
CLK3-220ENST00000567992 CELF2-AS1Q8N7Q2 184 aa8.26□□□□□ -1.09
CLK3-220ENST00000567992 ZNF420Q8TAQ5 688 aaPredicted RBP8.26□□□□□ -1.09
CLK3-220ENST00000567992 Q8TCH9 128 aa8.26□□□□□ -1.09
CLK3-220ENST00000567992 NRG4Q8WWG1 115 aa8.26□□□□□ -1.09
CLK3-220ENST00000567992 HPS1Q92902 700 aa8.26□□□□□ -1.09
CLK3-220ENST00000567992 MSI2Q96DH6 328 aaKnown RBP8.26□□□□□ -1.09
CLK3-220ENST00000567992 LGALS12Q96DT0 336 aa8.26□□□□□ -1.09
CLK3-220ENST00000567992 ZNF649Q9BS31 505 aa8.26□□□□□ -1.09
CLK3-220ENST00000567992 FGF23Q9GZV9 251 aaPredicted RBP8.26□□□□□ -1.09
CLK3-220ENST00000567992 PBOV1Q9GZY1 135 aa8.26□□□□□ -1.09
CLK3-220ENST00000567992 NARFLQ9H6Q4 476 aa8.26□□□□□ -1.09
CLK3-220ENST00000567992 BATF3Q9NR55 127 aa8.26□□□□□ -1.09
CLK3-220ENST00000567992 PPP1R3CQ9UQK1 317 aa8.26□□□□□ -1.09
CLK3-220ENST00000567992 EXOGQ9Y2C4 368 aaKnown RBP8.26□□□□□ -1.09
CLK3-220ENST00000567992 R4GMQ9 66 aa8.26□□□□□ -1.09
CLK3-220ENST00000567992 LOC100289279A0A1B0GTE1 492 aa8.25□□□□□ -1.09
CLK3-220ENST00000567992 FAM157AC9JC47 383 aa8.25□□□□□ -1.09
CLK3-220ENST00000567992 TMEM178BH3BS89 294 aa8.25□□□□□ -1.09
CLK3-220ENST00000567992 MPZL2O60487 215 aa8.25□□□□□ -1.09
CLK3-220ENST00000567992 GMDSO60547 372 aa8.25□□□□□ -1.09
CLK3-220ENST00000567992 SULT1C4O75897 302 aa8.25□□□□□ -1.09
CLK3-220ENST00000567992 KRT8P05787 483 aa8.25□□□□□ -1.09
CLK3-220ENST00000567992 CFL1P23528 166 aaKnown RBP8.25□□□□□ -1.09
CLK3-220ENST00000567992 DDOSTP39656 456 aa8.25□□□□□ -1.09
CLK3-220ENST00000567992 SRP9P49458 86 aaKnown RBP8.25□□□□□ -1.09
CLK3-220ENST00000567992 GZMKP49863 264 aa8.25□□□□□ -1.09
CLK3-220ENST00000567992 CDH15P55291 814 aa8.25□□□□□ -1.09
CLK3-220ENST00000567992 HOXA4Q00056 320 aaPredicted RBP8.25□□□□□ -1.09
CLK3-220ENST00000567992 ZMYND11Q15326 602 aa8.25□□□□□ -1.09
CLK3-220ENST00000567992 OR8G1Q15617 311 aa8.25□□□□□ -1.09
CLK3-220ENST00000567992 MPPED2Q15777 294 aa8.25□□□□□ -1.09
CLK3-220ENST00000567992 SMN1Q16637 294 aaKnown RBP8.25□□□□□ -1.09
CLK3-220ENST00000567992 ZNF181Q2M3W8 571 aa8.25□□□□□ -1.09
CLK3-220ENST00000567992 CDONQ4KMG0 1287 aa8.25□□□□□ -1.09
CLK3-220ENST00000567992 LIPNQ5VXI9 398 aa8.25□□□□□ -1.09
CLK3-220ENST00000567992 Q6ZSR3 168 aa8.25□□□□□ -1.09
CLK3-220ENST00000567992 CATSPERDQ86XM0 798 aa8.25□□□□□ -1.09
CLK3-220ENST00000567992 RORBQ92753 470 aa8.25□□□□□ -1.09
CLK3-220ENST00000567992 ADI1Q9BV57 179 aa8.25□□□□□ -1.09
CLK3-220ENST00000567992 SLC22A4Q9H015 551 aa8.25□□□□□ -1.09
CLK3-220ENST00000567992 MOB1AQ9H8S9 216 aa8.25□□□□□ -1.09
CLK3-220ENST00000567992 AMBNQ9NP70 447 aa8.25□□□□□ -1.09
CLK3-220ENST00000567992 GPR84Q9NQS5 396 aa8.25□□□□□ -1.09
CLK3-220ENST00000567992 ACOXLQ9NUZ1 547 aa8.25□□□□□ -1.09
CLK3-220ENST00000567992 ZNF391Q9UJN7 358 aa8.25□□□□□ -1.09
CLK3-220ENST00000567992 OR52A1Q9UKL2 312 aa8.25□□□□□ -1.09
CLK3-220ENST00000567992 MYRFQ9Y2G1 1151 aa8.25□□□□□ -1.09
CLK3-220ENST00000567992 RHBDD3Q9Y3P4 386 aa8.25□□□□□ -1.09
CLK3-220ENST00000567992 NPTNQ9Y639 398 aa8.25□□□□□ -1.09
CLK3-220ENST00000567992 A0A1B0GTI1 187 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 METTL15A6NJ78 407 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 ANKRD30BLA7E2S9 258 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 VGLL3A8MV65 326 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 LOC110117498-PIK3R3F6TDL0 507 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 CYB5R3P00387 301 aaPredicted RBP8.24□□□□□ -1.09
CLK3-220ENST00000567992 CST4P01036 141 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 IGHV2-5P01817 119 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 IGHA1P01876 353 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 GNAO1P09471 354 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 CCL1P22362 96 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 ATP6V1E1P36543 226 aa8.24□□□□□ -1.09
CLK3-220ENST00000567992 BTG1P62324 171 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms