RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 SYNPRQ8TBG9 265 aa12.76□□□□□ -0.37
COMMD4-221ENST00000567935 HTRA1Q92743 480 aa12.76□□□□□ -0.37
COMMD4-221ENST00000567935 FAM3DQ96BQ1 224 aa12.76□□□□□ -0.37
COMMD4-221ENST00000567935 C7orf50Q9BRJ6 194 aaKnown RBP12.76□□□□□ -0.37
COMMD4-221ENST00000567935 THAP7Q9BT49 309 aaPredicted RBP12.76□□□□□ -0.37
COMMD4-221ENST00000567935 METTL17Q9H7H0 456 aaPredicted RBP12.76□□□□□ -0.37
COMMD4-221ENST00000567935 PLEKHA1Q9HB21 404 aa12.76□□□□□ -0.37
COMMD4-221ENST00000567935 NEK6Q9HC98 313 aa12.76□□□□□ -0.37
COMMD4-221ENST00000567935 DIABLOQ9NR28 239 aa12.76□□□□□ -0.37
COMMD4-221ENST00000567935 CLCF1Q9UBD9 225 aa12.76□□□□□ -0.37
COMMD4-221ENST00000567935 PRSS44E7EML9 344 aa12.75□□□□□ -0.37
COMMD4-221ENST00000567935 MAGEB3O15480 346 aa12.75□□□□□ -0.37
COMMD4-221ENST00000567935 SS18L1O75177 396 aaPredicted RBP12.75□□□□□ -0.37
COMMD4-221ENST00000567935 DHRS3O75911 302 aa12.75□□□□□ -0.37
COMMD4-221ENST00000567935 SCGNO76038 276 aa12.75□□□□□ -0.37
COMMD4-221ENST00000567935 ITGA5P08648 1049 aa12.75□□□□□ -0.37
COMMD4-221ENST00000567935 MMP7P09237 267 aaPredicted RBP12.75□□□□□ -0.37
COMMD4-221ENST00000567935 RAB6AP20340 208 aa12.75□□□□□ -0.37
COMMD4-221ENST00000567935 AGTR1P30556 359 aa12.75□□□□□ -0.37
COMMD4-221ENST00000567935 ARR3P36575 388 aa12.75□□□□□ -0.37
COMMD4-221ENST00000567935 MAP2K3P46734 347 aa12.75□□□□□ -0.37
COMMD4-221ENST00000567935 HTR5AP47898 357 aa12.75□□□□□ -0.37
COMMD4-221ENST00000567935 PMP22Q01453 160 aa12.75□□□□□ -0.37
COMMD4-221ENST00000567935 FAM189A2Q15884 450 aa12.75□□□□□ -0.37
COMMD4-221ENST00000567935 TMEM69Q5SWH9 247 aa12.75□□□□□ -0.37
COMMD4-221ENST00000567935 ANKRD16Q6P6B7 361 aa12.75□□□□□ -0.37
COMMD4-221ENST00000567935 Q6ZS92 163 aa12.75□□□□□ -0.37
COMMD4-221ENST00000567935 LYPD6Q86Y78 171 aa12.75□□□□□ -0.37
COMMD4-221ENST00000567935 OR14K1Q8NGZ2 314 aa12.75□□□□□ -0.37
COMMD4-221ENST00000567935 SMIM4Q8WVI0 70 aa12.75□□□□□ -0.37
COMMD4-221ENST00000567935 DEDD2Q8WXF8 326 aa12.75□□□□□ -0.37
COMMD4-221ENST00000567935 NANOS1Q8WY41 292 aaKnown RBP12.75□□□□□ -0.37
COMMD4-221ENST00000567935 PP6455Q8WZ26 134 aa12.75□□□□□ -0.37
COMMD4-221ENST00000567935 TRIM63Q969Q1 353 aa12.75□□□□□ -0.37
COMMD4-221ENST00000567935 PHF21AQ96BD5 680 aa12.75□□□□□ -0.37
COMMD4-221ENST00000567935 ABHD1Q96SE0 405 aa12.75□□□□□ -0.37
COMMD4-221ENST00000567935 RBFOX1Q9NWB1 397 aaKnown RBP12.75□□□□□ -0.37
COMMD4-221ENST00000567935 V9GYS6 101 aa12.75□□□□□ -0.37
COMMD4-221ENST00000567935 CENPXA8MT69 81 aa12.74□□□□□ -0.37
COMMD4-221ENST00000567935 H3BSH0 61 aa12.74□□□□□ -0.37
COMMD4-221ENST00000567935 GABARAPH6UMI1 98 aa12.74□□□□□ -0.37
COMMD4-221ENST00000567935 CNOT4O95628 575 aaKnown RBP12.74□□□□□ -0.37
COMMD4-221ENST00000567935 SLC2A1P11166 492 aa12.74□□□□□ -0.37
COMMD4-221ENST00000567935 MPGP29372 298 aa12.74□□□□□ -0.37
COMMD4-221ENST00000567935 OR3A2P47893 321 aa12.74□□□□□ -0.37
COMMD4-221ENST00000567935 POU3F4P49335 361 aa12.74□□□□□ -0.37
COMMD4-221ENST00000567935 CLDN12P56749 244 aa12.74□□□□□ -0.37
COMMD4-221ENST00000567935 AP3S2P59780 193 aa12.74□□□□□ -0.37
COMMD4-221ENST00000567935 ARF1P84077 181 aaKnown RBP12.74□□□□□ -0.37
COMMD4-221ENST00000567935 PSG4Q00888 419 aa12.74□□□□□ -0.37
COMMD4-221ENST00000567935 TAB1Q15750 504 aa12.74□□□□□ -0.37
COMMD4-221ENST00000567935 RSPO1Q2MKA7 263 aaPredicted RBP12.74□□□□□ -0.37
COMMD4-221ENST00000567935 GLYATL3Q5SZD4 288 aa12.74□□□□□ -0.37
COMMD4-221ENST00000567935 ZNF57Q68EA5 555 aaPredicted RBP12.74□□□□□ -0.37
COMMD4-221ENST00000567935 OR2A2Q6IF42 318 aa12.74□□□□□ -0.37
COMMD4-221ENST00000567935 UTS2BQ765I0 119 aa12.74□□□□□ -0.37
COMMD4-221ENST00000567935 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.74□□□□□ -0.37
COMMD4-221ENST00000567935 NRARPQ7Z6K4 114 aa12.74□□□□□ -0.37
COMMD4-221ENST00000567935 SIAH3Q8IW03 269 aa12.74□□□□□ -0.37
COMMD4-221ENST00000567935 SKA3Q8IX90 412 aa12.74□□□□□ -0.37
COMMD4-221ENST00000567935 JAGN1Q8N5M9 183 aa12.74□□□□□ -0.37
COMMD4-221ENST00000567935 ENKURQ8TC29 256 aa12.74□□□□□ -0.37
COMMD4-221ENST00000567935 WNT2BQ93097 391 aa12.74□□□□□ -0.37
COMMD4-221ENST00000567935 SLC25A28Q96A46 364 aa12.74□□□□□ -0.37
COMMD4-221ENST00000567935 SNRNP40Q96DI7 357 aaKnown RBP12.74□□□□□ -0.37
COMMD4-221ENST00000567935 ITPKCQ96DU7 683 aa12.74□□□□□ -0.37
COMMD4-221ENST00000567935 ADAT3Q96EY9 351 aaPredicted RBP12.74□□□□□ -0.37
COMMD4-221ENST00000567935 C11orf54Q9H0W9 315 aaPredicted RBP12.74□□□□□ -0.37
COMMD4-221ENST00000567935 WNT5BQ9H1J7 359 aa12.74□□□□□ -0.37
COMMD4-221ENST00000567935 ASF1BQ9NVP2 202 aa12.74□□□□□ -0.37
COMMD4-221ENST00000567935 FBLN5Q9UBX5 448 aa12.74□□□□□ -0.37
COMMD4-221ENST00000567935 CLEC4AQ9UMR7 237 aa12.74□□□□□ -0.37
COMMD4-221ENST00000567935 AHRRA9YTQ3 701 aa12.73□□□□□ -0.37
COMMD4-221ENST00000567935 PLA2G10O15496 165 aa12.73□□□□□ -0.37
COMMD4-221ENST00000567935 LYRM1O43325 122 aa12.73□□□□□ -0.37
COMMD4-221ENST00000567935 XRCC3O43542 346 aa12.73□□□□□ -0.37
COMMD4-221ENST00000567935 BPNT1O95861 308 aa12.73□□□□□ -0.37
COMMD4-221ENST00000567935 ECDO95905 644 aaPredicted RBP12.73□□□□□ -0.37
COMMD4-221ENST00000567935 CRYABP02511 175 aaKnown RBP12.73□□□□□ -0.37
COMMD4-221ENST00000567935 GABRA1P14867 456 aa12.73□□□□□ -0.37
COMMD4-221ENST00000567935 ARSBP15848 533 aa12.73□□□□□ -0.37
COMMD4-221ENST00000567935 RFX2P48378 723 aa12.73□□□□□ -0.37
COMMD4-221ENST00000567935 SPOCK1Q08629 439 aa12.73□□□□□ -0.37
COMMD4-221ENST00000567935 C3AR1Q16581 482 aa12.73□□□□□ -0.37
COMMD4-221ENST00000567935 C2orf76Q3KRA6 126 aa12.73□□□□□ -0.37
COMMD4-221ENST00000567935 FBXW9Q5XUX1 488 aa12.73□□□□□ -0.37
COMMD4-221ENST00000567935 ZNF774Q6NX45 483 aa12.73□□□□□ -0.37
COMMD4-221ENST00000567935 TMEM53Q6P2H8 277 aa12.73□□□□□ -0.37
COMMD4-221ENST00000567935 CCDC36Q8IYA8 594 aa12.73□□□□□ -0.37
COMMD4-221ENST00000567935 UBE2J2Q8N2K1 259 aa12.73□□□□□ -0.37
COMMD4-221ENST00000567935 DUSP18Q8NEJ0 188 aa12.73□□□□□ -0.37
COMMD4-221ENST00000567935 OR51D1Q8NGF3 324 aa12.73□□□□□ -0.37
COMMD4-221ENST00000567935 CPNE2Q96FN4 548 aaPredicted RBP12.73□□□□□ -0.37
COMMD4-221ENST00000567935 FAM71F1Q96KD3 344 aaPredicted RBP12.73□□□□□ -0.37
COMMD4-221ENST00000567935 ZNF319Q9P2F9 582 aa12.73□□□□□ -0.37
COMMD4-221ENST00000567935 DIDO1Q9BTC0 2240 aaKnown RBP12.73□□□□□ -0.37
COMMD4-221ENST00000567935 LDLRAD4O15165 306 aa12.72□□□□□ -0.37
COMMD4-221ENST00000567935 EEF1E1O43324 174 aaKnown RBP12.72□□□□□ -0.37
COMMD4-221ENST00000567935 XRCC2O43543 280 aa12.72□□□□□ -0.37
COMMD4-221ENST00000567935 ZG16O60844 167 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms