RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 H0YCG3 227 aa0.51□□□□□ -2.33
CDH1-211ENST00000567320 NOL3O60936 208 aaKnown RBP0.51□□□□□ -2.33
CDH1-211ENST00000567320 FLOT1O75955 427 aa0.51□□□□□ -2.33
CDH1-211ENST00000567320 TROVE2P10155 538 aaKnown RBP eCLIP0.51□□□□□ -2.33
CDH1-211ENST00000567320 FOXN2P32314 431 aa0.51□□□□□ -2.33
CDH1-211ENST00000567320 CRYBB2P43320 205 aa0.51□□□□□ -2.33
CDH1-211ENST00000567320 CEBPDP49716 269 aaPredicted RBP0.51□□□□□ -2.33
CDH1-211ENST00000567320 UBE2HP62256 183 aa0.51□□□□□ -2.33
CDH1-211ENST00000567320 NAB1Q13506 487 aa0.51□□□□□ -2.33
CDH1-211ENST00000567320 VPS26BQ4G0F5 336 aa0.51□□□□□ -2.33
CDH1-211ENST00000567320 CTSL3PQ5NE16 218 aa0.51□□□□□ -2.33
CDH1-211ENST00000567320 MBOAT2Q6ZWT7 520 aa0.51□□□□□ -2.33
CDH1-211ENST00000567320 DRAM1Q8N682 238 aa0.51□□□□□ -2.33
CDH1-211ENST00000567320 SLC25A29Q8N8R3 303 aa0.51□□□□□ -2.33
CDH1-211ENST00000567320 UBAC2Q8NBM4 344 aa0.51□□□□□ -2.33
CDH1-211ENST00000567320 OR8J1Q8NGP2 316 aa0.51□□□□□ -2.33
CDH1-211ENST00000567320 GPR151Q8TDV0 419 aa0.51□□□□□ -2.33
CDH1-211ENST00000567320 CDS1Q92903 461 aa0.51□□□□□ -2.33
CDH1-211ENST00000567320 DOCK6Q96HP0 2047 aa0.51□□□□□ -2.33
CDH1-211ENST00000567320 TXNDC17Q9BRA2 123 aa0.51□□□□□ -2.33
CDH1-211ENST00000567320 ANKRD60Q9BZ19 345 aa0.51□□□□□ -2.33
CDH1-211ENST00000567320 TOLLIPQ9H0E2 274 aa0.51□□□□□ -2.33
CDH1-211ENST00000567320 METTL7AQ9H8H3 244 aa0.51□□□□□ -2.33
CDH1-211ENST00000567320 ZNF286AQ9HBT8 521 aa0.51□□□□□ -2.33
CDH1-211ENST00000567320 UXTQ9UBK9 157 aaPredicted RBP0.51□□□□□ -2.33
CDH1-211ENST00000567320 LGALS13Q9UHV8 139 aa0.51□□□□□ -2.33
CDH1-211ENST00000567320 DOCK10Q96BY6 2186 aa0.5□□□□□ -2.33
CDH1-211ENST00000567320 AIM2O14862 343 aa0.5□□□□□ -2.33
CDH1-211ENST00000567320 S1PR2O95136 353 aa0.5□□□□□ -2.33
CDH1-211ENST00000567320 MCF2P10911 925 aa0.5□□□□□ -2.33
CDH1-211ENST00000567320 CSNK2A2P19784 350 aaPredicted RBP0.5□□□□□ -2.33
CDH1-211ENST00000567320 HTR1DP28221 377 aa0.5□□□□□ -2.33
CDH1-211ENST00000567320 PCK1P35558 622 aa0.5□□□□□ -2.33
CDH1-211ENST00000567320 NAA10P41227 235 aaPredicted RBP0.5□□□□□ -2.33
CDH1-211ENST00000567320 CHIT1Q13231 466 aa0.5□□□□□ -2.33
CDH1-211ENST00000567320 PSMD5Q16401 504 aa0.5□□□□□ -2.33
CDH1-211ENST00000567320 CBLN2Q8IUK8 224 aa0.5□□□□□ -2.33
CDH1-211ENST00000567320 SPATA4Q8NEY3 305 aa0.5□□□□□ -2.33
CDH1-211ENST00000567320 OR4M2Q8NGB6 313 aa0.5□□□□□ -2.33
CDH1-211ENST00000567320 DCAKDQ8WVC6 231 aa0.5□□□□□ -2.33
CDH1-211ENST00000567320 NRBF2Q96F24 287 aa0.5□□□□□ -2.33
CDH1-211ENST00000567320 OR51M1Q9H341 326 aa0.5□□□□□ -2.33
CDH1-211ENST00000567320 PIGUQ9H490 435 aa0.5□□□□□ -2.33
CDH1-211ENST00000567320 TUBA4BQ9H853 241 aa0.5□□□□□ -2.33
CDH1-211ENST00000567320 RRAGDQ9NQL2 400 aaPredicted RBP0.5□□□□□ -2.33
CDH1-211ENST00000567320 PSMC3IPQ9P2W1 217 aaPredicted RBP0.5□□□□□ -2.33
CDH1-211ENST00000567320 ACOT9Q9Y305 439 aa0.5□□□□□ -2.33
CDH1-211ENST00000567320 STARD10Q9Y365 291 aa0.5□□□□□ -2.33
CDH1-211ENST00000567320 CAB39Q9Y376 341 aaPredicted RBP0.5□□□□□ -2.33
CDH1-211ENST00000567320 DDX49Q9Y6V7 483 aaKnown RBP0.5□□□□□ -2.33
CDH1-211ENST00000567320 VWA8A3KMH1 1905 aa0.5□□□□□ -2.33
CDH1-211ENST00000567320 DYSFO75923 2080 aa0.49□□□□□ -2.33
CDH1-211ENST00000567320 IGKV1-6A0A0C4DH72 117 aa0.49□□□□□ -2.33
CDH1-211ENST00000567320 C19orf71A6NCJ1 209 aa0.49□□□□□ -2.33
CDH1-211ENST00000567320 G3V3Q6 166 aa0.49□□□□□ -2.33
CDH1-211ENST00000567320 GABRPO00591 440 aa0.49□□□□□ -2.33
CDH1-211ENST00000567320 FGFR1OPO95684 399 aaKnown RBP0.49□□□□□ -2.33
CDH1-211ENST00000567320 IGKV1-39P01597 117 aa0.49□□□□□ -2.33
CDH1-211ENST00000567320 IGKV1D-39P04432 117 aa0.49□□□□□ -2.33
CDH1-211ENST00000567320 SERPINE2P07093 398 aa0.49□□□□□ -2.33
CDH1-211ENST00000567320 CT45A6P0DMU7 189 aa0.49□□□□□ -2.33
CDH1-211ENST00000567320 CT45A5P0DMU8 189 aa0.49□□□□□ -2.33
CDH1-211ENST00000567320 CT45A7P0DMV0 189 aa0.49□□□□□ -2.33
CDH1-211ENST00000567320 GGT2P36268 569 aa0.49□□□□□ -2.33
CDH1-211ENST00000567320 MAGEA6P43360 314 aa0.49□□□□□ -2.33
CDH1-211ENST00000567320 PPP1CAP62136 330 aa0.49□□□□□ -2.33
CDH1-211ENST00000567320 BST2Q10589 180 aaKnown RBP0.49□□□□□ -2.33
CDH1-211ENST00000567320 CDC37Q16543 378 aaPredicted RBP0.49□□□□□ -2.33
CDH1-211ENST00000567320 ZNF829Q3KNS6 432 aaPredicted RBP0.49□□□□□ -2.33
CDH1-211ENST00000567320 CT45A1Q5HYN5 189 aa0.49□□□□□ -2.33
CDH1-211ENST00000567320 TPTE2P1Q5T6R2 138 aa0.49□□□□□ -2.33
CDH1-211ENST00000567320 FAM104BQ5XKR9 115 aa0.49□□□□□ -2.33
CDH1-211ENST00000567320 TMPRSS11AQ6ZMR5 421 aa0.49□□□□□ -2.33
CDH1-211ENST00000567320 CMTM1Q8IZ96 169 aa0.49□□□□□ -2.33
CDH1-211ENST00000567320 BHLHE23Q8NDY6 225 aa0.49□□□□□ -2.33
CDH1-211ENST00000567320 CT45A3Q8NHU0 189 aa0.49□□□□□ -2.33
CDH1-211ENST00000567320 GPR119Q8TDV5 335 aa0.49□□□□□ -2.33
CDH1-211ENST00000567320 S100PBPQ96BU1 408 aa0.49□□□□□ -2.33
CDH1-211ENST00000567320 MS4A8Q9BY19 250 aa0.49□□□□□ -2.33
CDH1-211ENST00000567320 LRRC19Q9H756 370 aa0.49□□□□□ -2.33
CDH1-211ENST00000567320 PLEKHF2Q9H8W4 249 aa0.49□□□□□ -2.33
CDH1-211ENST00000567320 RGS18Q9NS28 235 aa0.49□□□□□ -2.33
CDH1-211ENST00000567320 SLC39A1Q9NY26 324 aa0.49□□□□□ -2.33
CDH1-211ENST00000567320 CES1P1Q9UKY3 287 aa0.49□□□□□ -2.33
CDH1-211ENST00000567320 OR51B4Q9Y5P0 310 aa0.49□□□□□ -2.33
CDH1-211ENST00000567320 FBN2P35556 2912 aa0.48□□□□□ -2.33
CDH1-211ENST00000567320 LOC102724200A0A096LPH7 203 aaPredicted RBP0.48□□□□□ -2.33
CDH1-211ENST00000567320 IGHV3OR16-9A0A0B4J2B5 98 aa0.48□□□□□ -2.33
CDH1-211ENST00000567320 C9JVG2 144 aa0.48□□□□□ -2.33
CDH1-211ENST00000567320 ENTPD6O75354 484 aa0.48□□□□□ -2.33
CDH1-211ENST00000567320 CLDN11O75508 207 aa0.48□□□□□ -2.33
CDH1-211ENST00000567320 GUCA1CO95843 209 aa0.48□□□□□ -2.33
CDH1-211ENST00000567320 CST1P01037 141 aa0.48□□□□□ -2.33
CDH1-211ENST00000567320 OR5AC1P0C628 307 aa0.48□□□□□ -2.33
CDH1-211ENST00000567320 TNNI1P19237 187 aa0.48□□□□□ -2.33
CDH1-211ENST00000567320 IFNAR2P48551 515 aa0.48□□□□□ -2.33
CDH1-211ENST00000567320 SEMG2Q02383 582 aa0.48□□□□□ -2.33
CDH1-211ENST00000567320 XKR7Q5GH72 579 aa0.48□□□□□ -2.33
CDH1-211ENST00000567320 PDPNQ86YL7 162 aa0.48□□□□□ -2.33
CDH1-211ENST00000567320 LRRC8AQ8IWT6 810 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms