RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 PNPP00491 289 aa18.25■□□□□ 0.51
NME3-210ENST00000567271 ZNF16P17020 682 aaPredicted RBP18.25■□□□□ 0.51
NME3-210ENST00000567271 GATA4P43694 442 aa18.25■□□□□ 0.51
NME3-210ENST00000567271 LMO4P61968 165 aa18.25■□□□□ 0.51
NME3-210ENST00000567271 OR8B8Q15620 311 aa18.25■□□□□ 0.51
NME3-210ENST00000567271 ZNF684Q5T5D7 378 aa18.25■□□□□ 0.51
NME3-210ENST00000567271 PEG10Q86TG7 708 aaKnown RBP18.25■□□□□ 0.51
NME3-210ENST00000567271 KLBQ86Z14 1044 aa18.25■□□□□ 0.51
NME3-210ENST00000567271 ZNF420Q8TAQ5 688 aaPredicted RBP18.25■□□□□ 0.51
NME3-210ENST00000567271 DCLRE1BQ9H816 532 aa18.25■□□□□ 0.51
NME3-210ENST00000567271 NPTNQ9Y639 398 aa18.25■□□□□ 0.51
NME3-210ENST00000567271 A0A0U1RQV5 110 aa18.24■□□□□ 0.51
NME3-210ENST00000567271 LOC100289279A0A1B0GTE1 492 aa18.24■□□□□ 0.51
NME3-210ENST00000567271 J3QRE1 110 aa18.24■□□□□ 0.51
NME3-210ENST00000567271 KRT8P05787 483 aa18.24■□□□□ 0.51
NME3-210ENST00000567271 MFGE8Q08431 387 aaPredicted RBP18.24■□□□□ 0.51
NME3-210ENST00000567271 OGFRL1Q5TC84 451 aaPredicted RBP18.24■□□□□ 0.51
NME3-210ENST00000567271 MOGAT3Q86VF5 341 aa18.24■□□□□ 0.51
NME3-210ENST00000567271 SPERTQ8NA61 448 aa18.24■□□□□ 0.51
NME3-210ENST00000567271 CSNK2A3Q8NEV1 391 aa18.24■□□□□ 0.51
NME3-210ENST00000567271 DVL3Q92997 716 aaPredicted RBP18.24■□□□□ 0.51
NME3-210ENST00000567271 PPP1R14AQ96A00 147 aa18.24■□□□□ 0.51
NME3-210ENST00000567271 Q96MT0 163 aa18.24■□□□□ 0.51
NME3-210ENST00000567271 SIGLEC11Q96RL6 698 aa18.24■□□□□ 0.51
NME3-210ENST00000567271 NUFIP1Q9UHK0 495 aaKnown RBP18.24■□□□□ 0.51
NME3-210ENST00000567271 R4GMQ9 66 aa18.24■□□□□ 0.51
NME3-210ENST00000567271 SONP18583 2426 aaKnown RBP18.24■□□□□ 0.51
NME3-210ENST00000567271 C2CD3Q4AC94 2353 aa18.23■□□□□ 0.51
NME3-210ENST00000567271 METTL15A6NJ78 407 aa18.23■□□□□ 0.51
NME3-210ENST00000567271 A8MV72 311 aaPredicted RBP18.23■□□□□ 0.51
NME3-210ENST00000567271 TMEM178BH3BS89 294 aa18.23■□□□□ 0.51
NME3-210ENST00000567271 SULT1C4O75897 302 aa18.23■□□□□ 0.51
NME3-210ENST00000567271 PTBP3O95758 552 aaKnown RBP18.23■□□□□ 0.51
NME3-210ENST00000567271 ACKR3P25106 362 aa18.23■□□□□ 0.51
NME3-210ENST00000567271 PMELP40967 661 aa18.23■□□□□ 0.51
NME3-210ENST00000567271 RIPPLY3P57055 190 aa18.23■□□□□ 0.51
NME3-210ENST00000567271 ZNF85Q03923 595 aa18.23■□□□□ 0.51
NME3-210ENST00000567271 ZNF181Q2M3W8 571 aa18.23■□□□□ 0.51
NME3-210ENST00000567271 PRAMEF6Q5VXH4 476 aa18.23■□□□□ 0.51
NME3-210ENST00000567271 PLEKHG7Q6ZR37 379 aa18.23■□□□□ 0.51
NME3-210ENST00000567271 YIPF7Q8N8F6 280 aa18.23■□□□□ 0.51
NME3-210ENST00000567271 ERGIC1Q969X5 290 aa18.23■□□□□ 0.51
NME3-210ENST00000567271 MOB1AQ9H8S9 216 aa18.23■□□□□ 0.51
NME3-210ENST00000567271 G6PC2Q9NQR9 355 aa18.23■□□□□ 0.51
NME3-210ENST00000567271 EXOGQ9Y2C4 368 aaKnown RBP18.23■□□□□ 0.51
NME3-210ENST00000567271 RHBDD3Q9Y3P4 386 aa18.23■□□□□ 0.51
NME3-210ENST00000567271 ABCA2Q9BZC7 2435 aa18.23■□□□□ 0.51
NME3-210ENST00000567271 TGFAP01135 160 aa18.22■□□□□ 0.51
NME3-210ENST00000567271 IGLV3-1P01715 115 aa18.22■□□□□ 0.51
NME3-210ENST00000567271 IGHV2-70P01814 119 aa18.22■□□□□ 0.51
NME3-210ENST00000567271 CDH15P55291 814 aa18.22■□□□□ 0.51
NME3-210ENST00000567271 SNCBQ16143 134 aa18.22■□□□□ 0.51
NME3-210ENST00000567271 LINC01356Q8N9X3 169 aa18.22■□□□□ 0.51
NME3-210ENST00000567271 PLPP7Q8NBV4 271 aa18.22■□□□□ 0.51
NME3-210ENST00000567271 Q8TCH9 128 aa18.22■□□□□ 0.51
NME3-210ENST00000567271 APH1BQ8WW43 257 aa18.22■□□□□ 0.51
NME3-210ENST00000567271 LGALS12Q96DT0 336 aa18.22■□□□□ 0.51
NME3-210ENST00000567271 ZNF665Q9H7R5 613 aa18.22■□□□□ 0.51
NME3-210ENST00000567271 NKX1-2Q9UD57 310 aaPredicted RBP18.22■□□□□ 0.51
NME3-210ENST00000567271 PCDHGB1Q9Y5G3 927 aa18.22■□□□□ 0.51
NME3-210ENST00000567271 SNX5Q9Y5X3 404 aa18.22■□□□□ 0.51
NME3-210ENST00000567271 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.22■□□□□ 0.519e-14■■■■□ 24.2
NME3-210ENST00000567271 SVEP1Q4LDE5 3571 aa18.22■□□□□ 0.51
NME3-210ENST00000567271 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.21■□□□□ 0.51
NME3-210ENST00000567271 ISPDA4D126 451 aa18.21■□□□□ 0.51
NME3-210ENST00000567271 FAM157AC9JC47 383 aa18.21■□□□□ 0.51
NME3-210ENST00000567271 LOC110117498-PIK3R3F6TDL0 507 aa18.21■□□□□ 0.51
NME3-210ENST00000567271 TTRP02766 147 aa18.21■□□□□ 0.51
NME3-210ENST00000567271 DBTP11182 482 aaKnown RBP18.21■□□□□ 0.51
NME3-210ENST00000567271 HOXB4P17483 251 aaPredicted RBP18.21■□□□□ 0.51
NME3-210ENST00000567271 ACTC1P68032 377 aa18.21■□□□□ 0.51
NME3-210ENST00000567271 ACTA1P68133 377 aa18.21■□□□□ 0.51
NME3-210ENST00000567271 ZNF91Q05481 1191 aa18.21■□□□□ 0.51
NME3-210ENST00000567271 MZT1Q08AG7 82 aa18.21■□□□□ 0.51
NME3-210ENST00000567271 MPPED2Q15777 294 aa18.21■□□□□ 0.51
NME3-210ENST00000567271 LIPNQ5VXI9 398 aa18.21■□□□□ 0.51
NME3-210ENST00000567271 TTC23Q5W5X9 447 aa18.21■□□□□ 0.51
NME3-210ENST00000567271 FAM166AQ6J272 317 aa18.21■□□□□ 0.51
NME3-210ENST00000567271 LRRC28Q86X40 367 aaPredicted RBP18.21■□□□□ 0.51
NME3-210ENST00000567271 ELMOD2Q8IZ81 293 aa18.21■□□□□ 0.51
NME3-210ENST00000567271 FTMTQ8N4E7 242 aa18.21■□□□□ 0.51
NME3-210ENST00000567271 OR51E1Q8TCB6 317 aa18.21■□□□□ 0.51
NME3-210ENST00000567271 ITFG2Q969R8 447 aa18.21■□□□□ 0.51
NME3-210ENST00000567271 GAL3ST1Q99999 423 aa18.21■□□□□ 0.51
NME3-210ENST00000567271 PPP1R3EQ9H7J1 279 aa18.21■□□□□ 0.51
NME3-210ENST00000567271 GPR84Q9NQS5 396 aa18.21■□□□□ 0.51
NME3-210ENST00000567271 C14orf119Q9NWQ9 140 aa18.21■□□□□ 0.51
NME3-210ENST00000567271 OR52A1Q9UKL2 312 aa18.21■□□□□ 0.51
NME3-210ENST00000567271 GTF2A1LQ9UNN4 478 aa18.21■□□□□ 0.51
NME3-210ENST00000567271 MALRD1Q5VYJ5 2156 aa18.2■□□□□ 0.5
NME3-210ENST00000567271 LRRC30A6NM36 301 aa18.2■□□□□ 0.5
NME3-210ENST00000567271 B4DSR2 109 aa18.2■□□□□ 0.5
NME3-210ENST00000567271 RPP14O95059 124 aaKnown RBP18.2■□□□□ 0.5
NME3-210ENST00000567271 CYB5R3P00387 301 aaPredicted RBP18.2■□□□□ 0.5
NME3-210ENST00000567271 CST4P01036 141 aa18.2■□□□□ 0.5
NME3-210ENST00000567271 IGHV2-5P01817 119 aa18.2■□□□□ 0.5
NME3-210ENST00000567271 GNALP38405 381 aa18.2■□□□□ 0.5
NME3-210ENST00000567271 BTG1P62324 171 aa18.2■□□□□ 0.5
NME3-210ENST00000567271 ADARB1P78563 741 aaKnown RBP18.2■□□□□ 0.5
NME3-210ENST00000567271 SLC34A1Q06495 639 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms