RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, human

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COMMD4-215	ENST00000566843	INTS12	Q96CB8	462 aa	Known RBP	13.91	□□□□□ -0.18
COMMD4-215	ENST00000566843	SCRT1	Q9BWW7	348 aa		13.91	□□□□□ -0.18
COMMD4-215	ENST00000566843	METTL8	Q9H825	291 aa	Known RBP	13.91	□□□□□ -0.18
COMMD4-215	ENST00000566843	COLQ	Q9Y215	455 aa	Predicted RBP	13.91	□□□□□ -0.18
COMMD4-215	ENST00000566843	ATG2B	Q96BY7	2078 aa		13.91	□□□□□ -0.18
COMMD4-215	ENST00000566843	PMS2P1	A4D2B8	440 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843		A6NIZ1	184 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	FIGNL2	A6NMB9	653 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843		A8MVM7	634 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	AGPAT2	O15120	278 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	GMFG	O60234	142 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	OR8U9	P0C7N5	309 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	ZNF708	P17019	499 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	P2RY4	P51582	365 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	CLDN6	P56747	220 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	RAP1B	P61224	184 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	RAP1A	P62834	184 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	TDG	Q13569	410 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	DNM1P34	Q6PK57	102 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	COX15	Q7KZN9	410 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	YAF2	Q8IY57	180 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	COMMD1	Q8N668	190 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	OR5D14	Q8NGL3	314 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	OR13G1	Q8NGZ3	307 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	OR8U1	Q8NH10	309 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	EDARADD	Q8WWZ3	215 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	C1orf147	Q96MC9	270 aa	Predicted RBP	13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	GHRL	Q9UBU3	117 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	MEMO1	Q9Y316	297 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	MTCH2	Q9Y6C9	303 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843		A0A1W2PQF6	199 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	C7orf77	A4D0Y5	90 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	C17orf51	A8MQB3	221 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	GATC	O43716	136 aa	Known RBP	13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	OR8U8	P0C7N1	319 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	ACKR3	P25106	362 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	GLP1R	P43220	463 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	YPEL5	P62699	121 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	FOXK1	P85037	733 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	FAM3A	P98173	230 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	SPEM2	Q0P670	501 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	AADACL3	Q5VUY0	350 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	ARMC6	Q6NXE6	501 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	RAB3C	Q96E17	227 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	MAP3K3	Q99759	626 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	CNTNAP3	Q9BZ76	1288 aa		13.9	□□□□□ -0.18
COMMD4-215	ENST00000566843	ALG1L2	C9J202	215 aa		13.89	□□□□□ -0.19
COMMD4-215	ENST00000566843	SOCS1	O15524	211 aa		13.89	□□□□□ -0.19
COMMD4-215	ENST00000566843	SYT7	O43581	403 aa		13.89	□□□□□ -0.19
COMMD4-215	ENST00000566843	RAD51D	O75771	328 aa		13.89	□□□□□ -0.19
COMMD4-215	ENST00000566843	JTB	O76095	146 aa		13.89	□□□□□ -0.19
COMMD4-215	ENST00000566843	THBS4	P35443	961 aa		13.89	□□□□□ -0.19
COMMD4-215	ENST00000566843	ZNF93	P35789	620 aa	Predicted RBP	13.89	□□□□□ -0.19
COMMD4-215	ENST00000566843	AKR1C3	P42330	323 aa		13.89	□□□□□ -0.19
COMMD4-215	ENST00000566843	ID4	P47928	161 aa		13.89	□□□□□ -0.19
COMMD4-215	ENST00000566843	TMEM50B	P56557	158 aa		13.89	□□□□□ -0.19
COMMD4-215	ENST00000566843	AWAT1	Q58HT5	328 aa		13.89	□□□□□ -0.19
COMMD4-215	ENST00000566843	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	13.89	□□□□□ -0.19
COMMD4-215	ENST00000566843	PRR22	Q8IZ63	422 aa		13.89	□□□□□ -0.19
COMMD4-215	ENST00000566843	OR5H2	Q8NGV7	314 aa		13.89	□□□□□ -0.19
COMMD4-215	ENST00000566843	ASB10	Q8WXI3	467 aa		13.89	□□□□□ -0.19
COMMD4-215	ENST00000566843	FOXQ1	Q9C009	403 aa		13.89	□□□□□ -0.19
COMMD4-215	ENST00000566843		A6NLC8	198 aa		13.89	□□□□□ -0.19
COMMD4-215	ENST00000566843	T	O15178	435 aa		13.89	□□□□□ -0.19
COMMD4-215	ENST00000566843	ZNF14	P17017	642 aa	Predicted RBP	13.89	□□□□□ -0.19
COMMD4-215	ENST00000566843	PI3	P19957	117 aa		13.89	□□□□□ -0.19
COMMD4-215	ENST00000566843	RAB5A	P20339	215 aa		13.89	□□□□□ -0.19
COMMD4-215	ENST00000566843	LTBR	P36941	435 aa		13.89	□□□□□ -0.19
COMMD4-215	ENST00000566843	EIF2S3	P41091	472 aa	Known RBP	13.89	□□□□□ -0.19
COMMD4-215	ENST00000566843	S100A10	P60903	97 aa		13.89	□□□□□ -0.19
COMMD4-215	ENST00000566843	ZP4	Q12836	540 aa		13.89	□□□□□ -0.19
COMMD4-215	ENST00000566843	AKIRIN2	Q53H80	203 aa		13.89	□□□□□ -0.19
COMMD4-215	ENST00000566843	OPN5	Q6U736	354 aa		13.89	□□□□□ -0.19
COMMD4-215	ENST00000566843	GKN2	Q86XP6	184 aa		13.89	□□□□□ -0.19
COMMD4-215	ENST00000566843	OR13C9	Q8NGT0	318 aa		13.89	□□□□□ -0.19
COMMD4-215	ENST00000566843	TCTEX1D2	Q8WW35	142 aa		13.89	□□□□□ -0.19
COMMD4-215	ENST00000566843	ZNF285	Q96NJ3	590 aa		13.89	□□□□□ -0.19
COMMD4-215	ENST00000566843	PBOV1	Q9GZY1	135 aa		13.89	□□□□□ -0.19
COMMD4-215	ENST00000566843	ARV1	Q9H2C2	271 aa		13.89	□□□□□ -0.19
COMMD4-215	ENST00000566843	DCAF16	Q9NXF7	216 aa		13.89	□□□□□ -0.19
COMMD4-215	ENST00000566843	TMEM184B	Q9Y519	407 aa	Predicted RBP	13.89	□□□□□ -0.19
COMMD4-215	ENST00000566843	FTCDNL1	E5RQL4	147 aa		13.88	□□□□□ -0.19
COMMD4-215	ENST00000566843	CLN5	O75503	358 aa		13.88	□□□□□ -0.19
COMMD4-215	ENST00000566843	TNF	P01375	233 aa		13.88	□□□□□ -0.19
COMMD4-215	ENST00000566843	HLA-DOB	P13765	273 aa		13.88	□□□□□ -0.19
COMMD4-215	ENST00000566843	RPL12	P30050	165 aa	Known RBP	13.88	□□□□□ -0.19
COMMD4-215	ENST00000566843	MAS1L	P35410	378 aa		13.88	□□□□□ -0.19
COMMD4-215	ENST00000566843	SNCA	P37840	140 aa		13.88	□□□□□ -0.19
COMMD4-215	ENST00000566843	RGS19	P49795	217 aa		13.88	□□□□□ -0.19
COMMD4-215	ENST00000566843	FMOD	Q06828	376 aa		13.88	□□□□□ -0.19
COMMD4-215	ENST00000566843	OR2A2	Q6IF42	318 aa		13.88	□□□□□ -0.19
COMMD4-215	ENST00000566843	GLIPR1L1	Q6UWM5	242 aa		13.88	□□□□□ -0.19
COMMD4-215	ENST00000566843	RNF144B	Q7Z419	303 aa		13.88	□□□□□ -0.19
COMMD4-215	ENST00000566843	ZNF101	Q8IZC7	436 aa		13.88	□□□□□ -0.19
COMMD4-215	ENST00000566843	KCNG3	Q8TAE7	436 aa		13.88	□□□□□ -0.19
COMMD4-215	ENST00000566843	MMAB	Q96EY8	250 aa	Predicted RBP	13.88	□□□□□ -0.19
COMMD4-215	ENST00000566843	BCL2L14	Q9BZR8	327 aa		13.88	□□□□□ -0.19
COMMD4-215	ENST00000566843	TCEAL2	Q9H3H9	227 aa	Predicted RBP	13.88	□□□□□ -0.19
COMMD4-215	ENST00000566843	CENPM	Q9NSP4	180 aa		13.88	□□□□□ -0.19
COMMD4-215	ENST00000566843		A0A1W2PPH5	198 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms