RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 SPINK14Q6IE38 97 aa16.44■□□□□ 0.22
MSLN-207ENST00000566549 GGNQ86UU5 652 aa16.44■□□□□ 0.22
MSLN-207ENST00000566549 OR10K1Q8NGX5 313 aa16.44■□□□□ 0.22
MSLN-207ENST00000566549 TMEM59Q9BXS4 323 aa16.44■□□□□ 0.22
MSLN-207ENST00000566549 CRLF2Q9HC73 371 aa16.44■□□□□ 0.22
MSLN-207ENST00000566549 CCDC187A0A096LP49 1063 aa16.43■□□□□ 0.22
MSLN-207ENST00000566549 OR14I1A6ND48 311 aa16.43■□□□□ 0.22
MSLN-207ENST00000566549 GJE1A6NN92 205 aa16.43■□□□□ 0.22
MSLN-207ENST00000566549 LEUTXA8MZ59 168 aa16.43■□□□□ 0.22
MSLN-207ENST00000566549 M0R135 149 aa16.43■□□□□ 0.22
MSLN-207ENST00000566549 RGS11O94810 467 aa16.43■□□□□ 0.22
MSLN-207ENST00000566549 ICAM2P13598 275 aa16.43■□□□□ 0.22
MSLN-207ENST00000566549 CD96P40200 585 aa16.43■□□□□ 0.22
MSLN-207ENST00000566549 ZNF84P51523 738 aa16.43■□□□□ 0.22
MSLN-207ENST00000566549 RAC3P60763 192 aa16.43■□□□□ 0.22
MSLN-207ENST00000566549 DHRS2Q13268 280 aa16.43■□□□□ 0.22
MSLN-207ENST00000566549 C1QL2Q7Z5L3 287 aa16.43■□□□□ 0.22
MSLN-207ENST00000566549 CDH26Q8IXH8 852 aa16.43■□□□□ 0.22
MSLN-207ENST00000566549 C12orf45Q8N5I9 185 aaPredicted RBP16.43■□□□□ 0.22
MSLN-207ENST00000566549 ZNF799Q96GE5 643 aa16.43■□□□□ 0.22
MSLN-207ENST00000566549 FOXJ2Q9P0K8 574 aa16.43■□□□□ 0.22
MSLN-207ENST00000566549 UBQLN2Q9UHD9 624 aa16.43■□□□□ 0.22
MSLN-207ENST00000566549 ZNF230Q9UIE0 474 aaPredicted RBP16.43■□□□□ 0.22
MSLN-207ENST00000566549 MCRIP1C9JLW8 97 aa16.43■□□□□ 0.22
MSLN-207ENST00000566549 HLA-AP01891 365 aaKnown RBP16.43■□□□□ 0.22
MSLN-207ENST00000566549 GDF1P27539 372 aa16.43■□□□□ 0.22
MSLN-207ENST00000566549 SEC61A1P61619 476 aaKnown RBP16.43■□□□□ 0.22
MSLN-207ENST00000566549 MEF2DQ14814 521 aa16.43■□□□□ 0.22
MSLN-207ENST00000566549 SFRP5Q5T4F7 317 aa16.43■□□□□ 0.22
MSLN-207ENST00000566549 C1QTNF12Q5T7M4 302 aa16.43■□□□□ 0.22
MSLN-207ENST00000566549 LIN54Q6MZP7 749 aa16.43■□□□□ 0.22
MSLN-207ENST00000566549 C20orf196Q8IYI0 205 aa16.43■□□□□ 0.22
MSLN-207ENST00000566549 MRGPRFQ96AM1 343 aa16.43■□□□□ 0.22
MSLN-207ENST00000566549 RAB3CQ96E17 227 aa16.43■□□□□ 0.22
MSLN-207ENST00000566549 PIGLQ9Y2B2 252 aa16.43■□□□□ 0.22
MSLN-207ENST00000566549 NCOA6Q14686 2063 aaPredicted RBP16.42■□□□□ 0.22
MSLN-207ENST00000566549 HPP00738 406 aa16.42■□□□□ 0.22
MSLN-207ENST00000566549 B4GALT1P15291 398 aa16.42■□□□□ 0.22
MSLN-207ENST00000566549 CASRP41180 1078 aa16.42■□□□□ 0.22
MSLN-207ENST00000566549 SORDQ00796 357 aa16.42■□□□□ 0.22
MSLN-207ENST00000566549 SSPNQ14714 243 aa16.42■□□□□ 0.22
MSLN-207ENST00000566549 UBE2V2Q15819 145 aa16.42■□□□□ 0.22
MSLN-207ENST00000566549 SNAI3Q3KNW1 292 aa16.42■□□□□ 0.22
MSLN-207ENST00000566549 ARMC10Q8N2F6 343 aa16.42■□□□□ 0.22
MSLN-207ENST00000566549 STEAP2Q8NFT2 490 aa16.42■□□□□ 0.22
MSLN-207ENST00000566549 OR2AE1Q8NHA4 323 aa16.42■□□□□ 0.22
MSLN-207ENST00000566549 KCNG3Q8TAE7 436 aa16.42■□□□□ 0.22
MSLN-207ENST00000566549 PIGTQ969N2 578 aa16.42■□□□□ 0.22
MSLN-207ENST00000566549 SLX1AQ9BQ83 275 aa16.42■□□□□ 0.22
MSLN-207ENST00000566549 STRADBQ9C0K7 418 aa16.42■□□□□ 0.22
MSLN-207ENST00000566549 ALX4Q9H161 411 aaPredicted RBP16.42■□□□□ 0.22
MSLN-207ENST00000566549 FLVCR1Q9Y5Y0 555 aa16.42■□□□□ 0.22
MSLN-207ENST00000566549 C9orf172C9J069 976 aa16.41■□□□□ 0.22
MSLN-207ENST00000566549 STMND1H3BQB6 276 aa16.41■□□□□ 0.22
MSLN-207ENST00000566549 H3BUI4 141 aa16.41■□□□□ 0.22
MSLN-207ENST00000566549 CCSO14618 274 aa16.41■□□□□ 0.22
MSLN-207ENST00000566549 MELTFP08582 738 aa16.41■□□□□ 0.22
MSLN-207ENST00000566549 CYB561P49447 251 aa16.41■□□□□ 0.22
MSLN-207ENST00000566549 DHODHQ02127 395 aa16.41■□□□□ 0.22
MSLN-207ENST00000566549 CHAF1BQ13112 559 aa16.41■□□□□ 0.22
MSLN-207ENST00000566549 KISS1Q15726 138 aa16.41■□□□□ 0.22
MSLN-207ENST00000566549 PLXDC2Q6UX71 529 aa16.41■□□□□ 0.22
MSLN-207ENST00000566549 OR10D3Q8NH80 312 aa16.41■□□□□ 0.22
MSLN-207ENST00000566549 ARHGAP5-AS1Q96IT6 56 aa16.41■□□□□ 0.22
MSLN-207ENST00000566549 THOC3Q96J01 351 aaKnown RBP16.41■□□□□ 0.22
MSLN-207ENST00000566549 PRRT1Q99946 306 aa16.41■□□□□ 0.22
MSLN-207ENST00000566549 NOP16Q9Y3C1 178 aaKnown RBP16.41■□□□□ 0.22
MSLN-207ENST00000566549 RAD51DO75771 328 aa16.41■□□□□ 0.22
MSLN-207ENST00000566549 AP2S1P53680 142 aaPredicted RBP16.41■□□□□ 0.22
MSLN-207ENST00000566549 ZNF774Q6NX45 483 aa16.41■□□□□ 0.22
MSLN-207ENST00000566549 FAM109AQ8N4B1 249 aa16.41■□□□□ 0.22
MSLN-207ENST00000566549 ZNF845Q96IR2 970 aaPredicted RBP16.41■□□□□ 0.22
MSLN-207ENST00000566549 EDEM2Q9BV94 578 aa16.41■□□□□ 0.22
MSLN-207ENST00000566549 ELL3Q9HB65 397 aaPredicted RBP16.41■□□□□ 0.22
MSLN-207ENST00000566549 ZNF107Q9UII5 783 aaPredicted RBP16.41■□□□□ 0.22
MSLN-207ENST00000566549 MAB21L2Q9Y586 359 aa16.41■□□□□ 0.22
MSLN-207ENST00000566549 OR2AT4A6NND4 320 aa16.4■□□□□ 0.22
MSLN-207ENST00000566549 DHRS3O75911 302 aa16.4■□□□□ 0.22
MSLN-207ENST00000566549 POU3F2P20265 443 aaPredicted RBP16.4■□□□□ 0.22
MSLN-207ENST00000566549 CTSSP25774 331 aa16.4■□□□□ 0.22
MSLN-207ENST00000566549 TMEM50BP56557 158 aa16.4■□□□□ 0.22
MSLN-207ENST00000566549 LY6G6FQ5SQ64 297 aa16.4■□□□□ 0.22
MSLN-207ENST00000566549 FOXL2NBQ6ZUU3 175 aa16.4■□□□□ 0.22
MSLN-207ENST00000566549 TAAR9Q96RI9 348 aa16.4■□□□□ 0.22
MSLN-207ENST00000566549 CST11Q9H112 138 aa16.4■□□□□ 0.22
MSLN-207ENST00000566549 PCSK5Q92824 1860 aa16.4■□□□□ 0.22
MSLN-207ENST00000566549 RPS10-NUDT3A0A1W2PQS6 291 aa16.4■□□□□ 0.22
MSLN-207ENST00000566549 IFNA6P05013 189 aa16.4■□□□□ 0.22
MSLN-207ENST00000566549 SERPINA7P05543 415 aa16.4■□□□□ 0.22
MSLN-207ENST00000566549 FCGR2AP12318 317 aa16.4■□□□□ 0.22
MSLN-207ENST00000566549 SERPINA2P20848 420 aa16.4■□□□□ 0.22
MSLN-207ENST00000566549 CD34P28906 385 aa16.4■□□□□ 0.22
MSLN-207ENST00000566549 RGS19P49795 217 aa16.4■□□□□ 0.22
MSLN-207ENST00000566549 ZNF133P52736 654 aaPredicted RBP16.4■□□□□ 0.22
MSLN-207ENST00000566549 PNLDC1Q8NA58 520 aaKnown RBP16.4■□□□□ 0.22
MSLN-207ENST00000566549 OR4K15Q8NH41 348 aa16.4■□□□□ 0.22
MSLN-207ENST00000566549 PSMF1Q92530 271 aa16.4■□□□□ 0.22
MSLN-207ENST00000566549 ARL6Q9H0F7 186 aa16.4■□□□□ 0.22
MSLN-207ENST00000566549 FBLN5Q9UBX5 448 aa16.4■□□□□ 0.22
MSLN-207ENST00000566549 PLEKHA6Q9Y2H5 1048 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms