RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 KLHL22Q53GT1 634 aa17.85■□□□□ 0.45
SHCBP1-205ENST00000566016 LIPNQ5VXI9 398 aa17.85■□□□□ 0.45
SHCBP1-205ENST00000566016 FAM220AQ7Z4H9 259 aa17.85■□□□□ 0.45
SHCBP1-205ENST00000566016 BIVMQ86UB2 503 aa17.85■□□□□ 0.45
SHCBP1-205ENST00000566016 YIPF7Q8N8F6 280 aa17.85■□□□□ 0.45
SHCBP1-205ENST00000566016 CNIH3Q8TBE1 160 aa17.85■□□□□ 0.45
SHCBP1-205ENST00000566016 FBLIM1Q8WUP2 373 aa17.85■□□□□ 0.45
SHCBP1-205ENST00000566016 MRPL48Q96GC5 212 aaKnown RBP17.85■□□□□ 0.45
SHCBP1-205ENST00000566016 OR2V2Q96R30 315 aa17.85■□□□□ 0.45
SHCBP1-205ENST00000566016 JAM3Q9BX67 310 aa17.85■□□□□ 0.45
SHCBP1-205ENST00000566016 AMBNQ9NP70 447 aa17.85■□□□□ 0.45
SHCBP1-205ENST00000566016 SNX5Q9Y5X3 404 aa17.85■□□□□ 0.45
SHCBP1-205ENST00000566016 DAPL1A0PJW8 107 aa17.84■□□□□ 0.45
SHCBP1-205ENST00000566016 ATP6V1B1P15313 513 aa17.84■□□□□ 0.45
SHCBP1-205ENST00000566016 USF1P22415 310 aaPredicted RBP17.84■□□□□ 0.45
SHCBP1-205ENST00000566016 SRP9P49458 86 aaKnown RBP17.84■□□□□ 0.45
SHCBP1-205ENST00000566016 AQP4P55087 323 aa17.84■□□□□ 0.45
SHCBP1-205ENST00000566016 SMN1Q16637 294 aaKnown RBP17.84■□□□□ 0.45
SHCBP1-205ENST00000566016 GFOD2Q3B7J2 385 aa17.84■□□□□ 0.45
SHCBP1-205ENST00000566016 LURAP1LQ8IV03 231 aa17.84■□□□□ 0.45
SHCBP1-205ENST00000566016 LYZL4Q96KX0 146 aa17.84■□□□□ 0.45
SHCBP1-205ENST00000566016 SIGLEC11Q96RL6 698 aa17.84■□□□□ 0.45
SHCBP1-205ENST00000566016 G6PC2Q9NQR9 355 aa17.84■□□□□ 0.45
SHCBP1-205ENST00000566016 IRGMA1A4Y4 181 aa17.83■□□□□ 0.45
SHCBP1-205ENST00000566016 FAM20BO75063 409 aa17.83■□□□□ 0.45
SHCBP1-205ENST00000566016 TTRP02766 147 aa17.83■□□□□ 0.45
SHCBP1-205ENST00000566016 TACSTD2P09758 323 aa17.83■□□□□ 0.45
SHCBP1-205ENST00000566016 GATA4P43694 442 aa17.83■□□□□ 0.45
SHCBP1-205ENST00000566016 SLC3A1Q07837 685 aa17.83■□□□□ 0.45
SHCBP1-205ENST00000566016 BCL2L15Q5TBC7 163 aa17.83■□□□□ 0.45
SHCBP1-205ENST00000566016 KRT74Q7RTS7 529 aa17.83■□□□□ 0.45
SHCBP1-205ENST00000566016 ELMOD2Q8IZ81 293 aa17.83■□□□□ 0.45
SHCBP1-205ENST00000566016 SPERTQ8NA61 448 aa17.83■□□□□ 0.45
SHCBP1-205ENST00000566016 ITLN1Q8WWA0 313 aa17.83■□□□□ 0.45
SHCBP1-205ENST00000566016 MEGF10Q96KG7 1140 aa17.83■□□□□ 0.45
SHCBP1-205ENST00000566016 ADAT1Q9BUB4 502 aaKnown RBP17.83■□□□□ 0.45
SHCBP1-205ENST00000566016 OR52A1Q9UKL2 312 aa17.83■□□□□ 0.45
SHCBP1-205ENST00000566016 HIVEP2P31629 2446 aa17.82■□□□□ 0.44
SHCBP1-205ENST00000566016 ANKRD30BLA7E2S9 258 aa17.82■□□□□ 0.44
SHCBP1-205ENST00000566016 CLDN25C9JDP6 229 aa17.82■□□□□ 0.44
SHCBP1-205ENST00000566016 H0YL77 283 aa17.82■□□□□ 0.44
SHCBP1-205ENST00000566016 IFNL4K9M1U5 179 aa17.82■□□□□ 0.44
SHCBP1-205ENST00000566016 CDC14BO60729 498 aa17.82■□□□□ 0.44
SHCBP1-205ENST00000566016 PTBP3O95758 552 aaKnown RBP17.82■□□□□ 0.44
SHCBP1-205ENST00000566016 CA6P23280 308 aa17.82■□□□□ 0.44
SHCBP1-205ENST00000566016 CD200P41217 278 aa17.82■□□□□ 0.44
SHCBP1-205ENST00000566016 GALEQ14376 348 aa17.82■□□□□ 0.44
SHCBP1-205ENST00000566016 SPRNQ5BIV9 151 aa17.82■□□□□ 0.44
SHCBP1-205ENST00000566016 SYS1Q8N2H4 156 aa17.82■□□□□ 0.44
SHCBP1-205ENST00000566016 OR52I1Q8NGK6 324 aa17.82■□□□□ 0.44
SHCBP1-205ENST00000566016 RORBQ92753 470 aa17.82■□□□□ 0.44
SHCBP1-205ENST00000566016 FGF20Q9NP95 211 aaPredicted RBP17.82■□□□□ 0.44
SHCBP1-205ENST00000566016 ACOXLQ9NUZ1 547 aa17.82■□□□□ 0.44
SHCBP1-205ENST00000566016 GNG8Q9UK08 70 aa17.82■□□□□ 0.44
SHCBP1-205ENST00000566016 MYRFQ9Y2G1 1151 aa17.82■□□□□ 0.44
SHCBP1-205ENST00000566016 F5H5P2 479 aa17.82■□□□□ 0.44
SHCBP1-205ENST00000566016 HLA-DPB1P04440 258 aa17.82■□□□□ 0.44
SHCBP1-205ENST00000566016 ACKR3P25106 362 aa17.82■□□□□ 0.44
SHCBP1-205ENST00000566016 GPR6P46095 362 aaPredicted RBP17.82■□□□□ 0.44
SHCBP1-205ENST00000566016 OR8G1Q15617 311 aa17.82■□□□□ 0.44
SHCBP1-205ENST00000566016 THAP5Q7Z6K1 395 aa17.82■□□□□ 0.44
SHCBP1-205ENST00000566016 CATSPERDQ86XM0 798 aa17.82■□□□□ 0.44
SHCBP1-205ENST00000566016 PLPP7Q8NBV4 271 aa17.82■□□□□ 0.44
SHCBP1-205ENST00000566016 OR51E1Q8TCB6 317 aa17.82■□□□□ 0.44
SHCBP1-205ENST00000566016 ERGIC1Q969X5 290 aa17.82■□□□□ 0.44
SHCBP1-205ENST00000566016 ZNF649Q9BS31 505 aa17.82■□□□□ 0.44
SHCBP1-205ENST00000566016 GCM1Q9NP62 436 aa17.82■□□□□ 0.44
SHCBP1-205ENST00000566016 ABCB9Q9NP78 766 aa17.82■□□□□ 0.44
SHCBP1-205ENST00000566016 GPR84Q9NQS5 396 aa17.82■□□□□ 0.44
SHCBP1-205ENST00000566016 PPP1R3CQ9UQK1 317 aa17.82■□□□□ 0.44
SHCBP1-205ENST00000566016 CACNG2Q9Y698 323 aa17.82■□□□□ 0.44
SHCBP1-205ENST00000566016 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.81■□□□□ 0.44
SHCBP1-205ENST00000566016 DHRS7CA6NNS2 312 aa17.81■□□□□ 0.44
SHCBP1-205ENST00000566016 SMAD7O15105 426 aaKnown RBP17.81■□□□□ 0.44
SHCBP1-205ENST00000566016 RPP14O95059 124 aaKnown RBP17.81■□□□□ 0.44
SHCBP1-205ENST00000566016 CST4P01036 141 aa17.81■□□□□ 0.44
SHCBP1-205ENST00000566016 DCKP27707 260 aa17.81■□□□□ 0.44
SHCBP1-205ENST00000566016 MAP2K3P46734 347 aa17.81■□□□□ 0.44
SHCBP1-205ENST00000566016 HSPA13P48723 471 aa17.81■□□□□ 0.44
SHCBP1-205ENST00000566016 MZT1Q08AG7 82 aa17.81■□□□□ 0.44
SHCBP1-205ENST00000566016 MAB21L1Q13394 359 aa17.81■□□□□ 0.44
SHCBP1-205ENST00000566016 TP53I3Q53FA7 332 aa17.81■□□□□ 0.44
SHCBP1-205ENST00000566016 ZBTB37Q5TC79 503 aa17.81■□□□□ 0.44
SHCBP1-205ENST00000566016 FDX2Q6P4F2 183 aa17.81■□□□□ 0.44
SHCBP1-205ENST00000566016 Q6ZSR3 168 aa17.81■□□□□ 0.44
SHCBP1-205ENST00000566016 CCL17Q92583 94 aa17.81■□□□□ 0.44
SHCBP1-205ENST00000566016 ALG8Q9BVK2 526 aa17.81■□□□□ 0.44
SHCBP1-205ENST00000566016 ERVK13-1Q9NX77 482 aa17.81■□□□□ 0.44
SHCBP1-205ENST00000566016 SONP18583 2426 aaKnown RBP17.81■□□□□ 0.44
SHCBP1-205ENST00000566016 IGHV4-61A0A0C4DH41 118 aa17.8■□□□□ 0.44
SHCBP1-205ENST00000566016 PPIHO43447 177 aaKnown RBP17.8■□□□□ 0.44
SHCBP1-205ENST00000566016 MTRF1O75570 445 aaKnown RBP17.8■□□□□ 0.44
SHCBP1-205ENST00000566016 DHRS3O75911 302 aa17.8■□□□□ 0.44
SHCBP1-205ENST00000566016 PIPP12273 146 aaPredicted RBP17.8■□□□□ 0.44
SHCBP1-205ENST00000566016 CCL1P22362 96 aa17.8■□□□□ 0.44
SHCBP1-205ENST00000566016 ZNF181Q2M3W8 571 aa17.8■□□□□ 0.44
SHCBP1-205ENST00000566016 C6orf52Q5T4I8 152 aa17.8■□□□□ 0.44
SHCBP1-205ENST00000566016 COMMD2Q86X83 199 aa17.8■□□□□ 0.44
SHCBP1-205ENST00000566016 HAVCR2Q8TDQ0 301 aa17.8■□□□□ 0.44
SHCBP1-205ENST00000566016 RNF166Q96A37 237 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms