RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 ZNF749O43361 778 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 TBPP20226 339 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 PIGPP57054 158 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 C1orf87Q8N0U7 546 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 ADAD2Q8NCV1 583 aaKnown RBP11.32□□□□□ -0.6
COMMD4-209ENST00000564068 OR2A5Q96R48 311 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 PBOV1Q9GZY1 135 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 CNTD2Q9H8S5 307 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 SLC17A5Q9NRA2 495 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 CACNA1DQ01668 2161 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 E5RGE8 158 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 RAB1AP62820 205 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 PCK2Q16822 640 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 PRICKLE4Q2TBC4 344 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 PHF19Q5T6S3 580 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 NKAIN2Q5VXU1 208 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 PTCRAQ6ISU1 281 aaPredicted RBP11.32□□□□□ -0.6
COMMD4-209ENST00000564068 PRSS54Q6PEW0 395 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 C15orf54Q8N8G6 183 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 GPX8Q8TED1 209 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 RTN4IP1Q8WWV3 396 aaPredicted RBP11.32□□□□□ -0.6
COMMD4-209ENST00000564068 ZNF764Q96H86 408 aaPredicted RBP11.32□□□□□ -0.6
COMMD4-209ENST00000564068 PLEKHA2Q9HB19 425 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 SUSD2Q9UGT4 822 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 CA14Q9ULX7 337 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 KLHDC2Q9Y2U9 406 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 NSG2Q9Y328 171 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 A0A1W2PPE2 198 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 C4orf47A7E2U8 309 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 LILRB3O75022 631 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 EPPINO95925 133 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 CTLA4P16410 223 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 CD1CP29017 333 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 CLDN17P56750 224 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 RPS15P62841 145 aaKnown RBP11.32□□□□□ -0.6
COMMD4-209ENST00000564068 RTL6Q6ICC9 239 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 TMPPEQ6ZT21 453 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 GRINAQ7Z429 371 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 ARRDC1Q8N5I2 433 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 DTWD2Q8NBA8 298 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 OR56B2PQ8NGI1 322 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 OR5L2Q8NGL0 311 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 APOBEC4Q8WW27 367 aaKnown RBP11.32□□□□□ -0.6
COMMD4-209ENST00000564068 TSLPQ969D9 159 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 ARHGAP5-AS1Q96IT6 56 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 TSPAN32Q96QS1 320 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 CABLES2Q9BTV7 478 aa11.32□□□□□ -0.6
COMMD4-209ENST00000564068 PATZ1Q9HBE1 687 aaKnown RBP11.32□□□□□ -0.6
COMMD4-209ENST00000564068 CST7O76096 145 aa11.31□□□□□ -0.6
COMMD4-209ENST00000564068 MUC1P15941 1255 aaPredicted RBP11.31□□□□□ -0.6
COMMD4-209ENST00000564068 G0S2P27469 103 aa11.31□□□□□ -0.6
COMMD4-209ENST00000564068 ADPRHP54922 357 aa11.31□□□□□ -0.6
COMMD4-209ENST00000564068 TMEM33P57088 247 aa11.31□□□□□ -0.6
COMMD4-209ENST00000564068 HSF1Q00613 529 aa11.31□□□□□ -0.6
COMMD4-209ENST00000564068 TFAP2EQ6VUC0 442 aa11.31□□□□□ -0.6
COMMD4-209ENST00000564068 NRIP2Q9BQI9 281 aa11.31□□□□□ -0.6
COMMD4-209ENST00000564068 CHST11Q9NPF2 352 aa11.31□□□□□ -0.6
COMMD4-209ENST00000564068 CD63P08962 238 aa11.31□□□□□ -0.6
COMMD4-209ENST00000564068 PLXDC2Q6UX71 529 aa11.31□□□□□ -0.6
COMMD4-209ENST00000564068 MOB3CQ70IA8 216 aa11.31□□□□□ -0.6
COMMD4-209ENST00000564068 OR13H1Q8NG92 308 aa11.31□□□□□ -0.6
COMMD4-209ENST00000564068 S1PR5Q9H228 398 aa11.31□□□□□ -0.6
COMMD4-209ENST00000564068 C19orf12Q9NSK7 152 aa11.31□□□□□ -0.6
COMMD4-209ENST00000564068 EIF3GO75821 320 aaKnown RBP eCLIP11.31□□□□□ -0.6
COMMD4-209ENST00000564068 BPNT1O95861 308 aa11.31□□□□□ -0.6
COMMD4-209ENST00000564068 HSD17B7P56937 341 aa11.31□□□□□ -0.6
COMMD4-209ENST00000564068 PRAMEF20Q5VT98 475 aa11.31□□□□□ -0.6
COMMD4-209ENST00000564068 SGK3Q96BR1 496 aa11.31□□□□□ -0.6
COMMD4-209ENST00000564068 SAMD10Q9BYL1 202 aa11.31□□□□□ -0.6
COMMD4-209ENST00000564068 ULBP2Q9BZM5 246 aa11.31□□□□□ -0.6
COMMD4-209ENST00000564068 ZNF275Q9NSD4 429 aaPredicted RBP11.31□□□□□ -0.6
COMMD4-209ENST00000564068 SLC39A9Q9NUM3 307 aa11.31□□□□□ -0.6
COMMD4-209ENST00000564068 CES1P1Q9UKY3 287 aa11.31□□□□□ -0.6
COMMD4-209ENST00000564068 VSIG4Q9Y279 399 aa11.31□□□□□ -0.6
COMMD4-209ENST00000564068 PIGLQ9Y2B2 252 aa11.31□□□□□ -0.6
COMMD4-209ENST00000564068 SERPINA7P05543 415 aa11.3□□□□□ -0.6
COMMD4-209ENST00000564068 DUSP1P28562 367 aa11.3□□□□□ -0.6
COMMD4-209ENST00000564068 FASLGP48023 281 aa11.3□□□□□ -0.6
COMMD4-209ENST00000564068 SLC37A1P57057 533 aa11.3□□□□□ -0.6
COMMD4-209ENST00000564068 DCAF7P61962 342 aa11.3□□□□□ -0.6
COMMD4-209ENST00000564068 PSG6Q00889 435 aa11.3□□□□□ -0.6
COMMD4-209ENST00000564068 CLEC18BQ6UXF7 455 aa11.3□□□□□ -0.6
COMMD4-209ENST00000564068 ZNF610Q8N9Z0 462 aa11.3□□□□□ -0.6
COMMD4-209ENST00000564068 SVILO95425 2214 aa11.3□□□□□ -0.6
COMMD4-209ENST00000564068 SFT2D2O95562 160 aa11.3□□□□□ -0.6
COMMD4-209ENST00000564068 ADRA2CP18825 462 aa11.3□□□□□ -0.6
COMMD4-209ENST00000564068 RAB5AP20339 215 aa11.3□□□□□ -0.6
COMMD4-209ENST00000564068 CTHP32929 405 aa11.3□□□□□ -0.6
COMMD4-209ENST00000564068 SCAND1P57086 179 aa11.3□□□□□ -0.6
COMMD4-209ENST00000564068 PLCXD3Q63HM9 321 aa11.3□□□□□ -0.6
COMMD4-209ENST00000564068 SLC25A42Q86VD7 318 aa11.3□□□□□ -0.6
COMMD4-209ENST00000564068 TCTN2Q96GX1 697 aa11.3□□□□□ -0.6
COMMD4-209ENST00000564068 EDEM2Q9BV94 578 aa11.3□□□□□ -0.6
COMMD4-209ENST00000564068 RAB18Q9NP72 206 aa11.3□□□□□ -0.6
COMMD4-209ENST00000564068 IGKV1-8A0A0C4DH67 115 aa11.3□□□□□ -0.6
COMMD4-209ENST00000564068 FAM221BA6H8Z2 402 aa11.3□□□□□ -0.6
COMMD4-209ENST00000564068 H3BP45 60 aa11.3□□□□□ -0.6
COMMD4-209ENST00000564068 DNASE2O00115 360 aaPredicted RBP11.3□□□□□ -0.6
COMMD4-209ENST00000564068 RAB27BO00194 218 aa11.3□□□□□ -0.6
COMMD4-209ENST00000564068 HRKO00198 91 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms