RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 DOCK11Q5JSL3 2073 aa11.69□□□□□ -0.54
TPM1-230ENST00000561266 ZNF670-ZNF695F2Z2N8 137 aa11.69□□□□□ -0.54
TPM1-230ENST00000561266 TMEM178BH3BS89 294 aa11.69□□□□□ -0.54
TPM1-230ENST00000561266 CASQ2O14958 399 aaPredicted RBP11.69□□□□□ -0.54
TPM1-230ENST00000561266 ZNF254O75437 659 aa11.69□□□□□ -0.54
TPM1-230ENST00000561266 WBP4O75554 376 aaKnown RBP11.69□□□□□ -0.54
TPM1-230ENST00000561266 APOC1P02654 83 aa11.69□□□□□ -0.54
TPM1-230ENST00000561266 TTRP02766 147 aa11.69□□□□□ -0.54
TPM1-230ENST00000561266 TNFSF4P23510 183 aa11.69□□□□□ -0.54
TPM1-230ENST00000561266 MTNR1AP48039 350 aa11.69□□□□□ -0.54
TPM1-230ENST00000561266 GZMKP49863 264 aa11.69□□□□□ -0.54
TPM1-230ENST00000561266 RIDAP52758 137 aaKnown RBP11.69□□□□□ -0.54
TPM1-230ENST00000561266 CDH15P55291 814 aa11.69□□□□□ -0.54
TPM1-230ENST00000561266 OR8G1Q15617 311 aa11.69□□□□□ -0.54
TPM1-230ENST00000561266 SMN1Q16637 294 aaKnown RBP11.69□□□□□ -0.54
TPM1-230ENST00000561266 OGFRL1Q5TC84 451 aaPredicted RBP11.69□□□□□ -0.54
TPM1-230ENST00000561266 ZNF826PQ6ZT77 177 aa11.69□□□□□ -0.54
TPM1-230ENST00000561266 C11orf53Q8IXP5 236 aa11.69□□□□□ -0.54
TPM1-230ENST00000561266 C19orf18Q8NEA5 215 aa11.69□□□□□ -0.54
TPM1-230ENST00000561266 OR10H4Q8NGA5 316 aa11.69□□□□□ -0.54
TPM1-230ENST00000561266 OR51E1Q8TCB6 317 aa11.69□□□□□ -0.54
TPM1-230ENST00000561266 NRG4Q8WWG1 115 aa11.69□□□□□ -0.54
TPM1-230ENST00000561266 LGALS12Q96DT0 336 aa11.69□□□□□ -0.54
TPM1-230ENST00000561266 RNFT2Q96EX2 444 aa11.69□□□□□ -0.54
TPM1-230ENST00000561266 ADAT1Q9BUB4 502 aaKnown RBP11.69□□□□□ -0.54
TPM1-230ENST00000561266 MROQ9BYG7 248 aa11.69□□□□□ -0.54
TPM1-230ENST00000561266 NIPAL2Q9H841 368 aa11.69□□□□□ -0.54
TPM1-230ENST00000561266 LPAR2Q9HBW0 351 aa11.69□□□□□ -0.54
TPM1-230ENST00000561266 MRPL15Q9P015 296 aaKnown RBP11.69□□□□□ -0.54
TPM1-230ENST00000561266 NPTNQ9Y639 398 aa11.69□□□□□ -0.54
TPM1-230ENST00000561266 TMEM14AQ9Y6G1 99 aa11.69□□□□□ -0.54
TPM1-230ENST00000561266 A0A1B0GTI1 187 aa11.68□□□□□ -0.54
TPM1-230ENST00000561266 A8MV72 311 aaPredicted RBP11.68□□□□□ -0.54
TPM1-230ENST00000561266 FAM20BO75063 409 aa11.68□□□□□ -0.54
TPM1-230ENST00000561266 RPP14O95059 124 aaKnown RBP11.68□□□□□ -0.54
TPM1-230ENST00000561266 PTBP3O95758 552 aaKnown RBP11.68□□□□□ -0.54
TPM1-230ENST00000561266 TGFAP01135 160 aa11.68□□□□□ -0.54
TPM1-230ENST00000561266 IGHV2-5P01817 119 aa11.68□□□□□ -0.54
TPM1-230ENST00000561266 OR2T7P0C7T2 308 aa11.68□□□□□ -0.54
TPM1-230ENST00000561266 TNFRSF1AP19438 455 aa11.68□□□□□ -0.54
TPM1-230ENST00000561266 DCTDP32321 178 aa11.68□□□□□ -0.54
TPM1-230ENST00000561266 GATA4P43694 442 aa11.68□□□□□ -0.54
TPM1-230ENST00000561266 SRP9P49458 86 aaKnown RBP11.68□□□□□ -0.54
TPM1-230ENST00000561266 ISL1P61371 349 aa11.68□□□□□ -0.54
TPM1-230ENST00000561266 ADARB1P78563 741 aaKnown RBP11.68□□□□□ -0.54
TPM1-230ENST00000561266 ZNF91Q05481 1191 aa11.68□□□□□ -0.54
TPM1-230ENST00000561266 EGR3Q06889 387 aa11.68□□□□□ -0.54
TPM1-230ENST00000561266 TMED1Q13445 227 aa11.68□□□□□ -0.54
TPM1-230ENST00000561266 TP53I3Q53FA7 332 aa11.68□□□□□ -0.54
TPM1-230ENST00000561266 IL17RELQ6ZVW7 336 aa11.68□□□□□ -0.54
TPM1-230ENST00000561266 OR2T27Q8NH04 317 aa11.68□□□□□ -0.54
TPM1-230ENST00000561266 HPS1Q92902 700 aa11.68□□□□□ -0.54
TPM1-230ENST00000561266 MNTQ99583 582 aa11.68□□□□□ -0.54
TPM1-230ENST00000561266 ZNF649Q9BS31 505 aa11.68□□□□□ -0.54
TPM1-230ENST00000561266 ZNF665Q9H7R5 613 aa11.68□□□□□ -0.54
TPM1-230ENST00000561266 GPR84Q9NQS5 396 aa11.68□□□□□ -0.54
TPM1-230ENST00000561266 NUFIP1Q9UHK0 495 aaKnown RBP11.68□□□□□ -0.54
TPM1-230ENST00000561266 EXOGQ9Y2C4 368 aaKnown RBP11.68□□□□□ -0.54
TPM1-230ENST00000561266 MYRFQ9Y2G1 1151 aa11.68□□□□□ -0.54
TPM1-230ENST00000561266 R4GMQ9 66 aa11.68□□□□□ -0.54
TPM1-230ENST00000561266 GMDSO60547 372 aa11.67□□□□□ -0.54
TPM1-230ENST00000561266 DBTP11182 482 aaKnown RBP11.67□□□□□ -0.54
TPM1-230ENST00000561266 PSMB10P40306 273 aa11.67□□□□□ -0.54
TPM1-230ENST00000561266 SEC61A1P61619 476 aaKnown RBP11.67□□□□□ -0.54
TPM1-230ENST00000561266 LIPNQ5VXI9 398 aa11.67□□□□□ -0.54
TPM1-230ENST00000561266 MEDAGQ5VYS4 303 aa11.67□□□□□ -0.54
TPM1-230ENST00000561266 LAIR2Q6ISS4 152 aa11.67□□□□□ -0.54
TPM1-230ENST00000561266 LRRC28Q86X40 367 aaPredicted RBP11.67□□□□□ -0.54
TPM1-230ENST00000561266 PRSS35Q8N3Z0 413 aa11.67□□□□□ -0.54
TPM1-230ENST00000561266 YIPF7Q8N8F6 280 aa11.67□□□□□ -0.54
TPM1-230ENST00000561266 CNIH3Q8TBE1 160 aa11.67□□□□□ -0.54
TPM1-230ENST00000561266 HPSE2Q8WWQ2 592 aa11.67□□□□□ -0.54
TPM1-230ENST00000561266 RORBQ92753 470 aa11.67□□□□□ -0.54
TPM1-230ENST00000561266 RAB1CQ92928 201 aa11.67□□□□□ -0.54
TPM1-230ENST00000561266 RFKQ969G6 155 aa11.67□□□□□ -0.54
TPM1-230ENST00000561266 FAM71F1Q96KD3 344 aaPredicted RBP11.67□□□□□ -0.54
TPM1-230ENST00000561266 OPA3Q9H6K4 179 aa11.67□□□□□ -0.54
TPM1-230ENST00000561266 METTL17Q9H7H0 456 aaPredicted RBP11.67□□□□□ -0.54
TPM1-230ENST00000561266 SP140LQ9H930 580 aa11.67□□□□□ -0.54
TPM1-230ENST00000561266 A0A0U1RQV5 110 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 ISPDA4D126 451 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 METTL15A6NJ78 407 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 ACOD1A6NK06 481 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 ZNF850A8MQ14 1090 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 LOC110117498-PIK3R3F6TDL0 507 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 H3BSH0 61 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 P2RY10O00398 339 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 PHYHO14832 338 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 LMX1BO60663 402 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 CRLF1O75462 422 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 GRPP07492 148 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 GNAO1P09471 354 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 ZFP36P26651 326 aaKnown RBP11.66□□□□□ -0.54
TPM1-230ENST00000561266 THBS2P35442 1172 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 ATP6V1E1P36543 226 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 DDOSTP39656 456 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 KIR3DL2P43630 455 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 OR12D2P58182 307 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 BTG1P62324 171 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 CSNK2BP67870 215 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms