RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 CMTM5Q96DZ9 223 aa14.56□□□□□ -0.08
TSPAN3-208ENST00000560514 PRPF19Q9UMS4 504 aaKnown RBP14.56□□□□□ -0.08
TSPAN3-208ENST00000560514 ENPP4Q9Y6X5 453 aa14.56□□□□□ -0.08
TSPAN3-208ENST00000560514 A0A1B0GW55 424 aa14.55□□□□□ -0.08
TSPAN3-208ENST00000560514 A0A1W2PRQ8 180 aa14.55□□□□□ -0.08
TSPAN3-208ENST00000560514 J3KTA2 159 aa14.55□□□□□ -0.08
TSPAN3-208ENST00000560514 NME4O00746 187 aa14.55□□□□□ -0.08
TSPAN3-208ENST00000560514 CDC42EP2O14613 210 aa14.55□□□□□ -0.08
TSPAN3-208ENST00000560514 PEX14O75381 377 aa14.55□□□□□ -0.08
TSPAN3-208ENST00000560514 DUX4L2P0CJ85 424 aa14.55□□□□□ -0.08
TSPAN3-208ENST00000560514 DUX4L3P0CJ86 424 aa14.55□□□□□ -0.08
TSPAN3-208ENST00000560514 DUX4L4P0CJ87 422 aa14.55□□□□□ -0.08
TSPAN3-208ENST00000560514 DUX4L5P0CJ88 424 aa14.55□□□□□ -0.08
TSPAN3-208ENST00000560514 DUX4L6P0CJ89 424 aa14.55□□□□□ -0.08
TSPAN3-208ENST00000560514 DUX4L7P0CJ90 424 aa14.55□□□□□ -0.08
TSPAN3-208ENST00000560514 GSK3BP49841 420 aa14.55□□□□□ -0.08
TSPAN3-208ENST00000560514 RPS6KA3P51812 740 aa14.55□□□□□ -0.08
TSPAN3-208ENST00000560514 SLC7A2P52569 658 aa14.55□□□□□ -0.08
TSPAN3-208ENST00000560514 DGCR6Q14129 220 aa14.55□□□□□ -0.08
TSPAN3-208ENST00000560514 KRTAP27-1Q3LI81 207 aa14.55□□□□□ -0.08
TSPAN3-208ENST00000560514 SLC36A3Q495N2 470 aa14.55□□□□□ -0.08
TSPAN3-208ENST00000560514 WDR38Q5JTN6 314 aa14.55□□□□□ -0.08
TSPAN3-208ENST00000560514 DUX4L9Q6RFH8 374 aaPredicted RBP14.55□□□□□ -0.08
TSPAN3-208ENST00000560514 CFAP77Q6ZQR2 320 aa14.55□□□□□ -0.08
TSPAN3-208ENST00000560514 LINC00346Q8IVM7 164 aa14.55□□□□□ -0.08
TSPAN3-208ENST00000560514 LNX2Q8N448 690 aa14.55□□□□□ -0.08
TSPAN3-208ENST00000560514 OR8S1Q8NH09 359 aa14.55□□□□□ -0.08
TSPAN3-208ENST00000560514 LRRC29Q8WV35 223 aa14.55□□□□□ -0.08
TSPAN3-208ENST00000560514 SPTSSAQ969W0 71 aa14.55□□□□□ -0.08
TSPAN3-208ENST00000560514 NKX3-1Q99801 234 aaPredicted RBP14.55□□□□□ -0.08
TSPAN3-208ENST00000560514 DCTN5Q9BTE1 182 aa14.55□□□□□ -0.08
TSPAN3-208ENST00000560514 DUX4Q9UBX2 424 aa14.55□□□□□ -0.08
TSPAN3-208ENST00000560514 SF3B6Q9Y3B4 125 aaKnown RBP14.55□□□□□ -0.08
TSPAN3-208ENST00000560514 FAM32AQ9Y421 112 aaKnown RBP14.55□□□□□ -0.08
TSPAN3-208ENST00000560514 IER3IP1Q9Y5U9 82 aa14.55□□□□□ -0.08
TSPAN3-208ENST00000560514 BHLHE40O14503 412 aa14.54□□□□□ -0.08
TSPAN3-208ENST00000560514 IMPA2O14732 288 aa14.54□□□□□ -0.08
TSPAN3-208ENST00000560514 SERPINA1P01009 418 aa14.54□□□□□ -0.08
TSPAN3-208ENST00000560514 LHBP01229 141 aa14.54□□□□□ -0.08
TSPAN3-208ENST00000560514 ZNF26P17031 533 aaPredicted RBP14.54□□□□□ -0.08
TSPAN3-208ENST00000560514 RHCEP18577 417 aa14.54□□□□□ -0.08
TSPAN3-208ENST00000560514 PCK2Q16822 640 aa14.54□□□□□ -0.08
TSPAN3-208ENST00000560514 LRRC75BQ2VPJ9 315 aa14.54□□□□□ -0.08
TSPAN3-208ENST00000560514 TBPL2Q6SJ96 375 aa14.54□□□□□ -0.08
TSPAN3-208ENST00000560514 TSEN54Q7Z6J9 526 aaKnown RBP14.54□□□□□ -0.08
TSPAN3-208ENST00000560514 FAM216BQ8N7L0 139 aa14.54□□□□□ -0.08
TSPAN3-208ENST00000560514 Q8N7P7 452 aa14.54□□□□□ -0.08
TSPAN3-208ENST00000560514 HSH2DQ96JZ2 352 aa14.54□□□□□ -0.08
TSPAN3-208ENST00000560514 TSSK2Q96PF2 358 aa14.54□□□□□ -0.08
TSPAN3-208ENST00000560514 KCTD14Q9BQ13 255 aaPredicted RBP14.54□□□□□ -0.08
TSPAN3-208ENST00000560514 OCSTAMPQ9BR26 566 aa14.54□□□□□ -0.08
TSPAN3-208ENST00000560514 METTL8Q9H825 291 aaKnown RBP14.54□□□□□ -0.08
TSPAN3-208ENST00000560514 RNPEPL1Q9HAU8 725 aa14.54□□□□□ -0.08
TSPAN3-208ENST00000560514 SRA1Q9HD15 236 aaKnown RBP14.54□□□□□ -0.08
TSPAN3-208ENST00000560514 NRIP3Q9NQ35 241 aa14.54□□□□□ -0.08
TSPAN3-208ENST00000560514 ABCD2Q9UBJ2 740 aa14.54□□□□□ -0.08
TSPAN3-208ENST00000560514 A0A1W2PQ09 198 aa14.53□□□□□ -0.08
TSPAN3-208ENST00000560514 M0R135 149 aa14.53□□□□□ -0.08
TSPAN3-208ENST00000560514 ATP8B1O43520 1251 aa14.53□□□□□ -0.08
TSPAN3-208ENST00000560514 HLA-DQA2P01906 255 aa14.53□□□□□ -0.08
TSPAN3-208ENST00000560514 CD28P10747 220 aa14.53□□□□□ -0.08
TSPAN3-208ENST00000560514 PRDX6P30041 224 aa14.53□□□□□ -0.08
TSPAN3-208ENST00000560514 ZNF92Q03936 586 aa14.53□□□□□ -0.08
TSPAN3-208ENST00000560514 CD69Q07108 199 aa14.53□□□□□ -0.08
TSPAN3-208ENST00000560514 SLC18B1Q6NT16 456 aa14.53□□□□□ -0.08
TSPAN3-208ENST00000560514 LIAT1Q6ZQX7 453 aa14.53□□□□□ -0.08
TSPAN3-208ENST00000560514 PTCHD4Q6ZW05 846 aa14.53□□□□□ -0.08
TSPAN3-208ENST00000560514 TNFRSF14Q92956 283 aa14.53□□□□□ -0.08
TSPAN3-208ENST00000560514 FAM162AQ96A26 154 aa14.53□□□□□ -0.08
TSPAN3-208ENST00000560514 ZNF799Q96GE5 643 aa14.53□□□□□ -0.08
TSPAN3-208ENST00000560514 GMPR2Q9P2T1 348 aaKnown RBP14.53□□□□□ -0.08
TSPAN3-208ENST00000560514 NKX6-3A6NJ46 265 aa14.52□□□□□ -0.09
TSPAN3-208ENST00000560514 ANKRD30BLA7E2S9 258 aa14.52□□□□□ -0.09
TSPAN3-208ENST00000560514 K7EIL1 84 aa14.52□□□□□ -0.09
TSPAN3-208ENST00000560514 M0R1W7 72 aa14.52□□□□□ -0.09
TSPAN3-208ENST00000560514 GMNNO75496 209 aa14.52□□□□□ -0.09
TSPAN3-208ENST00000560514 PPP1R3DO95685 299 aa14.52□□□□□ -0.09
TSPAN3-208ENST00000560514 H1F0P07305 194 aaKnown RBP14.52□□□□□ -0.09
TSPAN3-208ENST00000560514 IGLL1P15814 213 aa14.52□□□□□ -0.09
TSPAN3-208ENST00000560514 POU1F1P28069 291 aa14.52□□□□□ -0.09
TSPAN3-208ENST00000560514 NAA10P41227 235 aaPredicted RBP14.52□□□□□ -0.09
TSPAN3-208ENST00000560514 CDKN2AP42771 156 aaKnown RBP14.52□□□□□ -0.09
TSPAN3-208ENST00000560514 PSME3P61289 254 aa14.52□□□□□ -0.09
TSPAN3-208ENST00000560514 GLYATQ6IB77 296 aa14.52□□□□□ -0.09
TSPAN3-208ENST00000560514 DPY19L4Q7Z388 723 aa14.52□□□□□ -0.09
TSPAN3-208ENST00000560514 OR9Q1Q8NGQ5 310 aa14.52□□□□□ -0.09
TSPAN3-208ENST00000560514 OR2AE1Q8NHA4 323 aa14.52□□□□□ -0.09
TSPAN3-208ENST00000560514 C8orf46Q8TAG6 207 aa14.52□□□□□ -0.09
TSPAN3-208ENST00000560514 RORBQ92753 470 aa14.52□□□□□ -0.09
TSPAN3-208ENST00000560514 C12orf43Q96C57 262 aaKnown RBP14.52□□□□□ -0.09
TSPAN3-208ENST00000560514 FAM46AQ96IP4 442 aaKnown RBP14.52□□□□□ -0.09
TSPAN3-208ENST00000560514 GPX7Q96SL4 187 aaPredicted RBP14.52□□□□□ -0.09
TSPAN3-208ENST00000560514 NSRP1Q9H0G5 558 aaKnown RBP14.52□□□□□ -0.09
TSPAN3-208ENST00000560514 MYLK2Q9H1R3 596 aa14.52□□□□□ -0.09
TSPAN3-208ENST00000560514 GORASP2Q9H8Y8 452 aa14.52□□□□□ -0.09
TSPAN3-208ENST00000560514 KRCC1Q9NPI7 259 aaPredicted RBP14.52□□□□□ -0.09
TSPAN3-208ENST00000560514 DCAF13Q9NV06 445 aaKnown RBP14.52□□□□□ -0.09
TSPAN3-208ENST00000560514 NDUFAF4Q9P032 175 aa14.52□□□□□ -0.09
TSPAN3-208ENST00000560514 ACOT8O14734 319 aa14.51□□□□□ -0.09
TSPAN3-208ENST00000560514 RENP00797 406 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms