RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 UNKLQ9H9P5 680 aaKnown RBP10.2□□□□□ -0.78
SPG11-219ENST00000559822 CMC2Q9NRP2 79 aa10.2□□□□□ -0.78
SPG11-219ENST00000559822 ARMC1Q9NVT9 282 aa10.2□□□□□ -0.78
SPG11-219ENST00000559822 PRPF19Q9UMS4 504 aaKnown RBP10.2□□□□□ -0.78
SPG11-219ENST00000559822 DHRS12A0PJE2 317 aa10.19□□□□□ -0.78
SPG11-219ENST00000559822 ARRDC5A6NEK1 342 aa10.19□□□□□ -0.78
SPG11-219ENST00000559822 SRRM5B3KS81 715 aa10.19□□□□□ -0.78
SPG11-219ENST00000559822 H3BN98 237 aa10.19□□□□□ -0.78
SPG11-219ENST00000559822 HOXA3O43365 443 aaPredicted RBP10.19□□□□□ -0.78
SPG11-219ENST00000559822 TOX4O94842 621 aa10.19□□□□□ -0.78
SPG11-219ENST00000559822 CRYBA1P05813 215 aa10.19□□□□□ -0.78
SPG11-219ENST00000559822 RAP2AP10114 183 aa10.19□□□□□ -0.78
SPG11-219ENST00000559822 CALB2P22676 271 aa10.19□□□□□ -0.78
SPG11-219ENST00000559822 CFHR2P36980 270 aa10.19□□□□□ -0.78
SPG11-219ENST00000559822 GNALP38405 381 aa10.19□□□□□ -0.78
SPG11-219ENST00000559822 PPP1R8Q12972 351 aaKnown RBP10.19□□□□□ -0.78
SPG11-219ENST00000559822 PDCD1Q15116 288 aa10.19□□□□□ -0.78
SPG11-219ENST00000559822 BRD3OSQ6XYD6 125 aa10.19□□□□□ -0.78
SPG11-219ENST00000559822 SPATC1Q76KD6 591 aa10.19□□□□□ -0.78
SPG11-219ENST00000559822 SLC16A9Q7RTY1 509 aa10.19□□□□□ -0.78
SPG11-219ENST00000559822 DPY19L4Q7Z388 723 aa10.19□□□□□ -0.78
SPG11-219ENST00000559822 ERI1Q8IV48 349 aaKnown RBP10.19□□□□□ -0.78
SPG11-219ENST00000559822 TMEM86BQ8N661 226 aa10.19□□□□□ -0.78
SPG11-219ENST00000559822 CSNK2A3Q8NEV1 391 aa10.19□□□□□ -0.78
SPG11-219ENST00000559822 OR6N2Q8NGY6 317 aa10.19□□□□□ -0.78
SPG11-219ENST00000559822 RNF133Q8WVZ7 376 aa10.19□□□□□ -0.78
SPG11-219ENST00000559822 GATAD2BQ8WXI9 593 aa10.19□□□□□ -0.78
SPG11-219ENST00000559822 REEP6Q96HR9 211 aa10.19□□□□□ -0.78
SPG11-219ENST00000559822 PCGF1Q9BSM1 259 aa10.19□□□□□ -0.78
SPG11-219ENST00000559822 SLITRK2Q9H156 845 aa10.19□□□□□ -0.78
SPG11-219ENST00000559822 OR10A2Q9H208 303 aa10.19□□□□□ -0.78
SPG11-219ENST00000559822 RGCCQ9H4X1 137 aa10.19□□□□□ -0.78
SPG11-219ENST00000559822 RNPEPL1Q9HAU8 725 aa10.19□□□□□ -0.78
SPG11-219ENST00000559822 CTSZQ9UBR2 303 aa10.19□□□□□ -0.78
SPG11-219ENST00000559822 MGAM2Q2M2H8 2515 aa10.19□□□□□ -0.78
SPG11-219ENST00000559822 ANXA2P2A6NMY6 339 aa10.18□□□□□ -0.78
SPG11-219ENST00000559822 GLCEO94923 617 aa10.18□□□□□ -0.78
SPG11-219ENST00000559822 CLUP10909 449 aa10.18□□□□□ -0.78
SPG11-219ENST00000559822 PSKH1P11801 424 aa10.18□□□□□ -0.78
SPG11-219ENST00000559822 MUC1P15941 1255 aaPredicted RBP10.18□□□□□ -0.78
SPG11-219ENST00000559822 GSTT1P30711 240 aa10.18□□□□□ -0.78
SPG11-219ENST00000559822 NAA10P41227 235 aaPredicted RBP10.18□□□□□ -0.78
SPG11-219ENST00000559822 GYS2P54840 703 aa10.18□□□□□ -0.78
SPG11-219ENST00000559822 FAM3AP98173 230 aa10.18□□□□□ -0.78
SPG11-219ENST00000559822 MICBQ29980 383 aa10.18□□□□□ -0.78
SPG11-219ENST00000559822 DEFB112Q30KQ8 113 aa10.18□□□□□ -0.78
SPG11-219ENST00000559822 LINC01590Q5TEZ4 76 aa10.18□□□□□ -0.78
SPG11-219ENST00000559822 TEX36Q5VZQ5 186 aa10.18□□□□□ -0.78
SPG11-219ENST00000559822 SLC36A1Q7Z2H8 476 aa10.18□□□□□ -0.78
SPG11-219ENST00000559822 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.18□□□□□ -0.78
SPG11-219ENST00000559822 GCSAMQ8N6F7 178 aa10.18□□□□□ -0.78
SPG11-219ENST00000559822 GIPC3Q8TF64 312 aa10.18□□□□□ -0.78
SPG11-219ENST00000559822 TMIGD2Q96BF3 282 aa10.18□□□□□ -0.78
SPG11-219ENST00000559822 OTULINQ96BN8 352 aa10.18□□□□□ -0.78
SPG11-219ENST00000559822 ASB9Q96DX5 294 aa10.18□□□□□ -0.78
SPG11-219ENST00000559822 WDFY2Q96P53 400 aa10.18□□□□□ -0.78
SPG11-219ENST00000559822 MICU1Q9BPX6 476 aa10.18□□□□□ -0.78
SPG11-219ENST00000559822 ABHD6Q9BV23 337 aa10.18□□□□□ -0.78
SPG11-219ENST00000559822 MARCH7Q9H992 704 aa10.18□□□□□ -0.78
SPG11-219ENST00000559822 ABCB9Q9NP78 766 aa10.18□□□□□ -0.78
SPG11-219ENST00000559822 VNN3Q9NY84 501 aa10.18□□□□□ -0.78
SPG11-219ENST00000559822 KAAG1Q9UBP8 84 aa10.18□□□□□ -0.78
SPG11-219ENST00000559822 MMP24Q9Y5R2 645 aa10.18□□□□□ -0.78
SPG11-219ENST00000559822 C5orf63A6NC05 138 aa10.17□□□□□ -0.78
SPG11-219ENST00000559822 GNGT2O14610 69 aa10.17□□□□□ -0.78
SPG11-219ENST00000559822 TNFRSF13BO14836 293 aaPredicted RBP10.17□□□□□ -0.78
SPG11-219ENST00000559822 GPR37O15354 613 aa10.17□□□□□ -0.78
SPG11-219ENST00000559822 CST1P01037 141 aa10.17□□□□□ -0.78
SPG11-219ENST00000559822 LHBP01229 141 aa10.17□□□□□ -0.78
SPG11-219ENST00000559822 GYPAP02724 150 aa10.17□□□□□ -0.78
SPG11-219ENST00000559822 SFTPBP07988 381 aa10.17□□□□□ -0.78
SPG11-219ENST00000559822 H2BFMP0C1H6 154 aa10.17□□□□□ -0.78
SPG11-219ENST00000559822 ZNF121P58317 390 aaPredicted RBP10.17□□□□□ -0.78
SPG11-219ENST00000559822 RPL15P61313 204 aaKnown RBP10.17□□□□□ -0.78
SPG11-219ENST00000559822 IL5RAQ01344 420 aa10.17□□□□□ -0.78
SPG11-219ENST00000559822 ZNF826PQ6ZT77 177 aa10.17□□□□□ -0.78
SPG11-219ENST00000559822 FAM57BQ71RH2 274 aa10.17□□□□□ -0.78
SPG11-219ENST00000559822 BTN2A1Q7KYR7 527 aa10.17□□□□□ -0.78
SPG11-219ENST00000559822 FAM90A1Q86YD7 464 aa10.17□□□□□ -0.78
SPG11-219ENST00000559822 ZNF454Q8N9F8 522 aa10.17□□□□□ -0.78
SPG11-219ENST00000559822 OR1M1Q8NGA1 313 aa10.17□□□□□ -0.78
SPG11-219ENST00000559822 OR4F5Q8NH21 305 aa10.17□□□□□ -0.78
SPG11-219ENST00000559822 LRRC29Q8WV35 223 aa10.17□□□□□ -0.78
SPG11-219ENST00000559822 SGK3Q96BR1 496 aa10.17□□□□□ -0.78
SPG11-219ENST00000559822 C12orf43Q96C57 262 aaKnown RBP10.17□□□□□ -0.78
SPG11-219ENST00000559822 PGAM5Q96HS1 289 aa10.17□□□□□ -0.78
SPG11-219ENST00000559822 DMRTB1Q96MA1 342 aa10.17□□□□□ -0.78
SPG11-219ENST00000559822 CCT8L2Q96SF2 557 aa10.17□□□□□ -0.78
SPG11-219ENST00000559822 FEVQ99581 238 aa10.17□□□□□ -0.78
SPG11-219ENST00000559822 NIPSNAP1Q9BPW8 284 aa10.17□□□□□ -0.78
SPG11-219ENST00000559822 PAPOLGQ9BWT3 736 aaKnown RBP10.17□□□□□ -0.78
SPG11-219ENST00000559822 TEX12Q9BXU0 123 aa10.17□□□□□ -0.78
SPG11-219ENST00000559822 SMURF1Q9HCE7 757 aa10.17□□□□□ -0.78
SPG11-219ENST00000559822 DNAJC27Q9NZQ0 273 aa10.17□□□□□ -0.78
SPG11-219ENST00000559822 ZNF391Q9UJN7 358 aa10.17□□□□□ -0.78
SPG11-219ENST00000559822 POMT1Q9Y6A1 747 aa10.17□□□□□ -0.78
SPG11-219ENST00000559822 CENPVL3A0A0U1RRI6 287 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 hCG_38984A0A1B0GV85 526 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 A0A1B0GVI7 797 aa10.16□□□□□ -0.78
SPG11-219ENST00000559822 MDFIC2A0A1B0GVS7 189 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms