RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 TVP23AA6NH52 213 aa10.78□□□□□ -0.68
TPM1-220ENST00000559556 SLC22A31A6NKX4 558 aa10.78□□□□□ -0.68
TPM1-220ENST00000559556 ZNF878C9JN71 531 aa10.78□□□□□ -0.68
TPM1-220ENST00000559556 GMNNO75496 209 aa10.78□□□□□ -0.68
TPM1-220ENST00000559556 TSPAN15O95858 294 aa10.78□□□□□ -0.68
TPM1-220ENST00000559556 MUC1P15941 1255 aaPredicted RBP10.78□□□□□ -0.68
TPM1-220ENST00000559556 RRM2P31350 389 aa10.78□□□□□ -0.68
TPM1-220ENST00000559556 DDOSTP39656 456 aa10.78□□□□□ -0.68
TPM1-220ENST00000559556 PGBD2Q6P3X8 592 aa10.78□□□□□ -0.68
TPM1-220ENST00000559556 Q6ZSV7 163 aa10.78□□□□□ -0.68
TPM1-220ENST00000559556 WDR86Q86TI4 376 aa10.78□□□□□ -0.68
TPM1-220ENST00000559556 FGFRL1Q8N441 504 aa10.78□□□□□ -0.68
TPM1-220ENST00000559556 RNF148Q8N7C7 305 aa10.78□□□□□ -0.68
TPM1-220ENST00000559556 LY6G5BQ8NDX9 201 aa10.78□□□□□ -0.68
TPM1-220ENST00000559556 OR52L1Q8NGH7 329 aa10.78□□□□□ -0.68
TPM1-220ENST00000559556 GNPDA2Q8TDQ7 276 aa10.78□□□□□ -0.68
TPM1-220ENST00000559556 NPRL2Q8WTW4 380 aa10.78□□□□□ -0.68
TPM1-220ENST00000559556 ZNRF4Q8WWF5 429 aa10.78□□□□□ -0.68
TPM1-220ENST00000559556 ST8SIA4Q92187 359 aa10.78□□□□□ -0.68
TPM1-220ENST00000559556 SLAMF6Q96DU3 332 aa10.78□□□□□ -0.68
TPM1-220ENST00000559556 CMTM5Q96DZ9 223 aa10.78□□□□□ -0.68
TPM1-220ENST00000559556 KCNJ15Q99712 375 aa10.78□□□□□ -0.68
TPM1-220ENST00000559556 MYLK2Q9H1R3 596 aa10.78□□□□□ -0.68
TPM1-220ENST00000559556 C16orf95Q9H693 158 aa10.78□□□□□ -0.68
TPM1-220ENST00000559556 EGLN3Q9H6Z9 239 aa10.78□□□□□ -0.68
TPM1-220ENST00000559556 RNPEPL1Q9HAU8 725 aa10.78□□□□□ -0.68
TPM1-220ENST00000559556 IL20Q9NYY1 176 aa10.78□□□□□ -0.68
TPM1-220ENST00000559556 ADA2Q9NZK5 511 aa10.78□□□□□ -0.68
TPM1-220ENST00000559556 MAGEL2Q9UJ55 1249 aa10.78□□□□□ -0.68
TPM1-220ENST00000559556 NBEAL2Q6ZNJ1 2754 aa10.78□□□□□ -0.68
TPM1-220ENST00000559556 A0A1B0GW55 424 aa10.77□□□□□ -0.69
TPM1-220ENST00000559556 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.77□□□□□ -0.69
TPM1-220ENST00000559556 FABP3P05413 133 aa10.77□□□□□ -0.69
TPM1-220ENST00000559556 FBP1P09467 338 aa10.77□□□□□ -0.69
TPM1-220ENST00000559556 DUX4L2P0CJ85 424 aa10.77□□□□□ -0.69
TPM1-220ENST00000559556 DUX4L3P0CJ86 424 aa10.77□□□□□ -0.69
TPM1-220ENST00000559556 DUX4L4P0CJ87 422 aa10.77□□□□□ -0.69
TPM1-220ENST00000559556 DUX4L5P0CJ88 424 aa10.77□□□□□ -0.69
TPM1-220ENST00000559556 DUX4L6P0CJ89 424 aa10.77□□□□□ -0.69
TPM1-220ENST00000559556 DUX4L7P0CJ90 424 aa10.77□□□□□ -0.69
TPM1-220ENST00000559556 SLC2A1P11166 492 aa10.77□□□□□ -0.69
TPM1-220ENST00000559556 HSD17B1P14061 328 aa10.77□□□□□ -0.69
TPM1-220ENST00000559556 PRDX6P30041 224 aa10.77□□□□□ -0.69
TPM1-220ENST00000559556 ENTPD1P49961 510 aa10.77□□□□□ -0.69
TPM1-220ENST00000559556 PRKXP51817 358 aa10.77□□□□□ -0.69
TPM1-220ENST00000559556 MICBQ29980 383 aa10.77□□□□□ -0.69
TPM1-220ENST00000559556 WDR38Q5JTN6 314 aa10.77□□□□□ -0.69
TPM1-220ENST00000559556 TEX30Q5JUR7 227 aa10.77□□□□□ -0.69
TPM1-220ENST00000559556 DUX4L9Q6RFH8 374 aaPredicted RBP10.77□□□□□ -0.69
TPM1-220ENST00000559556 WDR82Q6UXN9 313 aa10.77□□□□□ -0.69
TPM1-220ENST00000559556 C11orf53Q8IXP5 236 aa10.77□□□□□ -0.69
TPM1-220ENST00000559556 LNX2Q8N448 690 aa10.77□□□□□ -0.69
TPM1-220ENST00000559556 OR51L1Q8NGJ5 315 aa10.77□□□□□ -0.69
TPM1-220ENST00000559556 OR8D4Q8NGM9 314 aa10.77□□□□□ -0.69
TPM1-220ENST00000559556 LRRC29Q8WV35 223 aa10.77□□□□□ -0.69
TPM1-220ENST00000559556 PKP2Q99959 881 aa10.77□□□□□ -0.69
TPM1-220ENST00000559556 BTBD10Q9BSF8 475 aa10.77□□□□□ -0.69
TPM1-220ENST00000559556 CNTD2Q9H8S5 307 aa10.77□□□□□ -0.69
TPM1-220ENST00000559556 TCF7L1Q9HCS4 588 aa10.77□□□□□ -0.69
TPM1-220ENST00000559556 IL1RAPQ9NPH3 570 aa10.77□□□□□ -0.69
TPM1-220ENST00000559556 DUX4Q9UBX2 424 aa10.77□□□□□ -0.69
TPM1-220ENST00000559556 VPREB3Q9UKI3 123 aa10.77□□□□□ -0.69
TPM1-220ENST00000559556 ANKRD30BLA7E2S9 258 aa10.76□□□□□ -0.69
TPM1-220ENST00000559556 ARPC2O15144 300 aa10.76□□□□□ -0.69
TPM1-220ENST00000559556 GPR37O15354 613 aa10.76□□□□□ -0.69
TPM1-220ENST00000559556 TIPRLO75663 272 aa10.76□□□□□ -0.69
TPM1-220ENST00000559556 SPARCP09486 303 aa10.76□□□□□ -0.69
TPM1-220ENST00000559556 GRK5P34947 590 aa10.76□□□□□ -0.69
TPM1-220ENST00000559556 CSNK2BP67870 215 aa10.76□□□□□ -0.69
TPM1-220ENST00000559556 FAM3AP98173 230 aa10.76□□□□□ -0.69
TPM1-220ENST00000559556 POU4F2Q12837 409 aa10.76□□□□□ -0.69
TPM1-220ENST00000559556 DHRS7BQ6IAN0 325 aaPredicted RBP10.76□□□□□ -0.69
TPM1-220ENST00000559556 SLC16A9Q7RTY1 509 aa10.76□□□□□ -0.69
TPM1-220ENST00000559556 SLC36A1Q7Z2H8 476 aa10.76□□□□□ -0.69
TPM1-220ENST00000559556 DPY19L4Q7Z388 723 aa10.76□□□□□ -0.69
TPM1-220ENST00000559556 PDZD9Q8IXQ8 264 aa10.76□□□□□ -0.69
TPM1-220ENST00000559556 SLC37A3Q8NCC5 494 aa10.76□□□□□ -0.69
TPM1-220ENST00000559556 OR1M1Q8NGA1 313 aa10.76□□□□□ -0.69
TPM1-220ENST00000559556 OR9Q1Q8NGQ5 310 aa10.76□□□□□ -0.69
TPM1-220ENST00000559556 OR8S1Q8NH09 359 aa10.76□□□□□ -0.69
TPM1-220ENST00000559556 C8orf46Q8TAG6 207 aa10.76□□□□□ -0.69
TPM1-220ENST00000559556 MCUR1Q96AQ8 359 aa10.76□□□□□ -0.69
TPM1-220ENST00000559556 C12orf43Q96C57 262 aaKnown RBP10.76□□□□□ -0.69
TPM1-220ENST00000559556 NMNAT2Q9BZQ4 307 aa10.76□□□□□ -0.69
TPM1-220ENST00000559556 TLNRD1Q9H1K6 362 aa10.76□□□□□ -0.69
TPM1-220ENST00000559556 SEMA6AQ9H2E6 1030 aa10.76□□□□□ -0.69
TPM1-220ENST00000559556 ONECUT1Q9UBC0 465 aa10.76□□□□□ -0.69
TPM1-220ENST00000559556 PRPF19Q9UMS4 504 aaKnown RBP10.76□□□□□ -0.69
TPM1-220ENST00000559556 CAB39Q9Y376 341 aaPredicted RBP10.76□□□□□ -0.69
TPM1-220ENST00000559556 FAM96BQ9Y3D0 163 aa10.76□□□□□ -0.69
TPM1-220ENST00000559556 hCG_38984A0A1B0GV85 526 aa10.75□□□□□ -0.69
TPM1-220ENST00000559556 RNASEK-C17orf49H0YIS7 233 aa10.75□□□□□ -0.69
TPM1-220ENST00000559556 TSPAN9O75954 239 aa10.75□□□□□ -0.69
TPM1-220ENST00000559556 SPI1P17947 270 aa10.75□□□□□ -0.69
TPM1-220ENST00000559556 FMO3P31513 532 aa10.75□□□□□ -0.69
TPM1-220ENST00000559556 HMGA2P52926 109 aa10.75□□□□□ -0.69
TPM1-220ENST00000559556 GRB2P62993 217 aaKnown RBP10.75□□□□□ -0.69
TPM1-220ENST00000559556 ELF3P78545 371 aaPredicted RBP10.75□□□□□ -0.69
TPM1-220ENST00000559556 GUCA2AQ02747 115 aa10.75□□□□□ -0.69
TPM1-220ENST00000559556 TAF13Q15543 124 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms