RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 NIPAL2Q9H841 368 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 G6PC2Q9NQR9 355 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 C14orf119Q9NWQ9 140 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 C1orf123Q9NWV4 160 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 RNF7Q9UBF6 113 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 IKZF2Q9UKS7 526 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 OAZ3Q9UMX2 235 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 PPIAL4AQ9Y536 164 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 LRP12Q9Y561 859 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 TMEM14AQ9Y6G1 99 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 ARHGAP32A7KAX9 2087 aa6.88□□□□□ -1.31
SNX1-207ENST00000559401 ATRQ13535 2644 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 WNK2Q9Y3S1 2297 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 hCG_38984A0A1B0GV85 526 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 A0A1B0GWJ7 208 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 CCDC182A6NF36 153 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 SLC22A31A6NKX4 558 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 ANXA2P2A6NMY6 339 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 ZAR1LA6NP61 321 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 C3orf80F5H4A9 247 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 J3QLI3 93 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 EBAG9O00559 213 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 ALOX5APP20292 161 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 EPHA1P21709 976 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 ZFP36P26651 326 aaKnown RBP6.87□□□□□ -1.31
SNX1-207ENST00000559401 EPHA2P29317 976 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 THBS2P35442 1172 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 PMELP40967 661 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 PITPNBP48739 271 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 GSK3AP49840 483 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 KPNB1Q14974 876 aaKnown RBP6.87□□□□□ -1.31
SNX1-207ENST00000559401 SNCBQ16143 134 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 ZNF181Q2M3W8 571 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 ZNF404Q494X3 552 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 ARMCX4Q5H9R4 360 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 C12orf73Q69YU5 71 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 SFRP4Q6FHJ7 346 aaPredicted RBP6.87□□□□□ -1.31
SNX1-207ENST00000559401 ZNF826PQ6ZT77 177 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 KCTD8Q6ZWB6 473 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 RHOUQ7L0Q8 258 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 ASRGL1Q7L266 308 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 MEPCEQ7L2J0 689 aaKnown RBP6.87□□□□□ -1.31
SNX1-207ENST00000559401 KLBQ86Z14 1044 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 GID4Q8IVV7 300 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 PHC2Q8IXK0 858 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 SLC35F2Q8IXU6 374 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 CSNK2A3Q8NEV1 391 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 NANPQ8TBE9 248 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 TMEM163Q8TC26 289 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 Q8TCH9 128 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 SPSB4Q96A44 273 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 NEIL1Q96FI4 390 aaPredicted RBP6.87□□□□□ -1.31
SNX1-207ENST00000559401 TECTBQ96PL2 329 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 TMEM246Q9BRR3 403 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 SSBP3Q9BWW4 388 aaPredicted RBP6.87□□□□□ -1.31
SNX1-207ENST00000559401 TMPRSS13Q9BYE2 586 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 MROQ9BYG7 248 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 RGCCQ9H4X1 137 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 TMEM165Q9HC07 324 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 MIOXQ9UGB7 285 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 LRCH1Q9Y2L9 728 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 ORC6Q9Y5N6 252 aa6.87□□□□□ -1.31
SNX1-207ENST00000559401 TMEM269A0A1B0GVZ9 245 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 ZNF670-ZNF695F2Z2N8 137 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 F5H0A9 414 aaPredicted RBP6.86□□□□□ -1.31
SNX1-207ENST00000559401 LGALS8O00214 317 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 PHYHO14832 338 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 AVPP01185 164 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 WNT2P09544 360 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 ATP6V1E1P36543 226 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 RIDAP52758 137 aaKnown RBP6.86□□□□□ -1.31
SNX1-207ENST00000559401 CXCR4P61073 352 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 ACTR3P61158 418 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 HOXA4Q00056 320 aaPredicted RBP6.86□□□□□ -1.31
SNX1-207ENST00000559401 PRDX4Q13162 271 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 KCNJ8Q15842 424 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 ZNF829Q3KNS6 432 aaPredicted RBP6.86□□□□□ -1.31
SNX1-207ENST00000559401 KRTAP24-1Q3LI83 254 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 NXNL2Q5VZ03 156 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 LYPD2Q6UXB3 125 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 BTNL3Q6UXE8 466 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 DCDC5Q6ZRR9 648 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 PRSS45Q7RTY3 260 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 C1QL2Q7Z5L3 287 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 THAP5Q7Z6K1 395 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 BPIFB2Q8N4F0 458 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 OR8B12Q8NGG6 310 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 OR51G2Q8NGK0 314 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 ZNF418Q8TF45 676 aaPredicted RBP6.86□□□□□ -1.31
SNX1-207ENST00000559401 LRRC29Q8WV35 223 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 ASB17Q8WXJ9 295 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 PIGCQ92535 297 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 HIST1H2AAQ96QV6 131 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 OR8B4Q96RC9 309 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 TBX5Q99593 518 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 PKP2Q99959 881 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 MICU1Q9BPX6 476 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 RBM4BQ9BQ04 359 aaKnown RBP6.86□□□□□ -1.31
SNX1-207ENST00000559401 RTL8AQ9BWD3 113 aa6.86□□□□□ -1.31
SNX1-207ENST00000559401 MMP26Q9NRE1 261 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms