RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 COL6A5A8TX70 2615 aa10.1□□□□□ -0.79
TPM1-216ENST00000558910 MXRA5Q9NR99 2828 aa10.1□□□□□ -0.79
TPM1-216ENST00000558910 H3BSH0 61 aa10.09□□□□□ -0.79
TPM1-216ENST00000558910 FAM20BO75063 409 aa10.09□□□□□ -0.79
TPM1-216ENST00000558910 H2AFB1P0C5Y9 115 aa10.09□□□□□ -0.79
TPM1-216ENST00000558910 H2AFB2P0C5Z0 115 aa10.09□□□□□ -0.79
TPM1-216ENST00000558910 ANPEPP15144 967 aa10.09□□□□□ -0.79
TPM1-216ENST00000558910 HOXB6P17509 224 aaKnown RBP10.09□□□□□ -0.79
TPM1-216ENST00000558910 ZIK1Q3SY52 487 aaPredicted RBP10.09□□□□□ -0.79
TPM1-216ENST00000558910 DMRTC1Q5HYR2 192 aa10.09□□□□□ -0.79
TPM1-216ENST00000558910 TEX30Q5JUR7 227 aa10.09□□□□□ -0.79
TPM1-216ENST00000558910 PLEKHG7Q6ZR37 379 aa10.09□□□□□ -0.79
TPM1-216ENST00000558910 SLC16A9Q7RTY1 509 aa10.09□□□□□ -0.79
TPM1-216ENST00000558910 KLHL36Q8N4N3 616 aa10.09□□□□□ -0.79
TPM1-216ENST00000558910 OR11L1Q8NGX0 322 aa10.09□□□□□ -0.79
TPM1-216ENST00000558910 OR8S1Q8NH09 359 aa10.09□□□□□ -0.79
TPM1-216ENST00000558910 RNF133Q8WVZ7 376 aa10.09□□□□□ -0.79
TPM1-216ENST00000558910 C22orf15Q8WYQ4 148 aa10.09□□□□□ -0.79
TPM1-216ENST00000558910 SGK3Q96BR1 496 aa10.09□□□□□ -0.79
TPM1-216ENST00000558910 NRBF2Q96F24 287 aa10.09□□□□□ -0.79
TPM1-216ENST00000558910 SIGLEC11Q96RL6 698 aa10.09□□□□□ -0.79
TPM1-216ENST00000558910 CIB1Q99828 191 aa10.09□□□□□ -0.79
TPM1-216ENST00000558910 PKP2Q99959 881 aa10.09□□□□□ -0.79
TPM1-216ENST00000558910 OR10A2Q9H208 303 aa10.09□□□□□ -0.79
TPM1-216ENST00000558910 MMADHCQ9H3L0 296 aaPredicted RBP10.09□□□□□ -0.79
TPM1-216ENST00000558910 MMP26Q9NRE1 261 aa10.09□□□□□ -0.79
TPM1-216ENST00000558910 C1orf123Q9NWV4 160 aa10.09□□□□□ -0.79
TPM1-216ENST00000558910 IKZF2Q9UKS7 526 aa10.09□□□□□ -0.79
TPM1-216ENST00000558910 OAZ3Q9UMX2 235 aa10.09□□□□□ -0.79
TPM1-216ENST00000558910 IGHV3OR15-7A0A075B7D8 119 aa10.08□□□□□ -0.8
TPM1-216ENST00000558910 IGHV3OR16-10A0A075B7F0 116 aa10.08□□□□□ -0.8
TPM1-216ENST00000558910 TRAV20A0A0B4J274 112 aa10.08□□□□□ -0.8
TPM1-216ENST00000558910 CCDC182A6NF36 153 aa10.08□□□□□ -0.8
TPM1-216ENST00000558910 LRRC30A6NM36 301 aa10.08□□□□□ -0.8
TPM1-216ENST00000558910 ANKRD30BLA7E2S9 258 aa10.08□□□□□ -0.8
TPM1-216ENST00000558910 CEACAM18A8MTB9 384 aa10.08□□□□□ -0.8
TPM1-216ENST00000558910 PRODHO43272 600 aa10.08□□□□□ -0.8
TPM1-216ENST00000558910 XRCC2O43543 280 aa10.08□□□□□ -0.8
TPM1-216ENST00000558910 PNPP00491 289 aa10.08□□□□□ -0.8
TPM1-216ENST00000558910 RPS2P15880 293 aaKnown RBP10.08□□□□□ -0.8
TPM1-216ENST00000558910 OPRL1P41146 370 aa10.08□□□□□ -0.8
TPM1-216ENST00000558910 OR8B8Q15620 311 aa10.08□□□□□ -0.8
TPM1-216ENST00000558910 PCK2Q16822 640 aa10.08□□□□□ -0.8
TPM1-216ENST00000558910 LCN1P1Q5VSP4 162 aa10.08□□□□□ -0.8
TPM1-216ENST00000558910 LYPD2Q6UXB3 125 aa10.08□□□□□ -0.8
TPM1-216ENST00000558910 KCTD8Q6ZWB6 473 aa10.08□□□□□ -0.8
TPM1-216ENST00000558910 SPICQ8N5J4 248 aa10.08□□□□□ -0.8
TPM1-216ENST00000558910 RFLNBQ8N5W9 214 aa10.08□□□□□ -0.8
TPM1-216ENST00000558910 OTOSQ8NHW6 89 aa10.08□□□□□ -0.8
TPM1-216ENST00000558910 PPP1R14AQ96A00 147 aa10.08□□□□□ -0.8
TPM1-216ENST00000558910 TEAD3Q99594 435 aa10.08□□□□□ -0.8
TPM1-216ENST00000558910 PAPOLGQ9BWT3 736 aaKnown RBP10.08□□□□□ -0.8
TPM1-216ENST00000558910 MRPL18Q9H0U6 180 aaKnown RBP10.08□□□□□ -0.8
TPM1-216ENST00000558910 C7orf69Q9H7B7 122 aa10.08□□□□□ -0.8
TPM1-216ENST00000558910 MARCH7Q9H992 704 aa10.08□□□□□ -0.8
TPM1-216ENST00000558910 COPS3Q9UNS2 423 aa10.08□□□□□ -0.8
TPM1-216ENST00000558910 LRP12Q9Y561 859 aa10.08□□□□□ -0.8
TPM1-216ENST00000558910 WNK2Q9Y3S1 2297 aa10.08□□□□□ -0.8
TPM1-216ENST00000558910 PPIAL4EA0A075B759 164 aa10.07□□□□□ -0.8
TPM1-216ENST00000558910 A0A0G2JMP0 313 aa10.07□□□□□ -0.8
TPM1-216ENST00000558910 A0A0X1KG70 313 aa10.07□□□□□ -0.8
TPM1-216ENST00000558910 PPIAL4DF5H284 164 aa10.07□□□□□ -0.8
TPM1-216ENST00000558910 F8W735 103 aaPredicted RBP10.07□□□□□ -0.8
TPM1-216ENST00000558910 PPIAL4FP0DN26 164 aa10.07□□□□□ -0.8
TPM1-216ENST00000558910 FCGR1AP12314 374 aa10.07□□□□□ -0.8
TPM1-216ENST00000558910 EPHA1P21709 976 aa10.07□□□□□ -0.8
TPM1-216ENST00000558910 PCMT1P22061 227 aa10.07□□□□□ -0.8
TPM1-216ENST00000558910 SLC2A5P22732 501 aa10.07□□□□□ -0.8
TPM1-216ENST00000558910 OTX1P32242 354 aaPredicted RBP10.07□□□□□ -0.8
TPM1-216ENST00000558910 GNALP38405 381 aa10.07□□□□□ -0.8
TPM1-216ENST00000558910 MDH2P40926 338 aaKnown RBP10.07□□□□□ -0.8
TPM1-216ENST00000558910 ESRRGP62508 458 aa10.07□□□□□ -0.8
TPM1-216ENST00000558910 FAM3AP98173 230 aa10.07□□□□□ -0.8
TPM1-216ENST00000558910 ODF4Q2M2E3 257 aa10.07□□□□□ -0.8
TPM1-216ENST00000558910 SLC35D3Q5M8T2 416 aa10.07□□□□□ -0.8
TPM1-216ENST00000558910 KDM4DQ6B0I6 523 aa10.07□□□□□ -0.8
TPM1-216ENST00000558910 ASRGL1Q7L266 308 aa10.07□□□□□ -0.8
TPM1-216ENST00000558910 LRRC28Q86X40 367 aaPredicted RBP10.07□□□□□ -0.8
TPM1-216ENST00000558910 OR4M2Q8NGB6 313 aa10.07□□□□□ -0.8
TPM1-216ENST00000558910 OR51G2Q8NGK0 314 aa10.07□□□□□ -0.8
TPM1-216ENST00000558910 PIGCQ92535 297 aa10.07□□□□□ -0.8
TPM1-216ENST00000558910 FAM71F1Q96KD3 344 aaPredicted RBP10.07□□□□□ -0.8
TPM1-216ENST00000558910 APOL4Q9BPW4 351 aa10.07□□□□□ -0.8
TPM1-216ENST00000558910 TMEM246Q9BRR3 403 aa10.07□□□□□ -0.8
TPM1-216ENST00000558910 TMPRSS13Q9BYE2 586 aa10.07□□□□□ -0.8
TPM1-216ENST00000558910 TOR3AQ9H497 397 aa10.07□□□□□ -0.8
TPM1-216ENST00000558910 FN3KRPQ9HA64 309 aa10.07□□□□□ -0.8
TPM1-216ENST00000558910 PATZ1Q9HBE1 687 aaKnown RBP10.07□□□□□ -0.8
TPM1-216ENST00000558910 TMEM165Q9HC07 324 aa10.07□□□□□ -0.8
TPM1-216ENST00000558910 RHBDD3Q9Y3P4 386 aa10.07□□□□□ -0.8
TPM1-216ENST00000558910 PPIAL4AQ9Y536 164 aa10.07□□□□□ -0.8
TPM1-216ENST00000558910 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.06□□□□□ -0.8
TPM1-216ENST00000558910 ZNF850A8MQ14 1090 aa10.06□□□□□ -0.8
TPM1-216ENST00000558910 PRR32B1ATL7 298 aa10.06□□□□□ -0.8
TPM1-216ENST00000558910 EBAG9O00559 213 aa10.06□□□□□ -0.8
TPM1-216ENST00000558910 RPP14O95059 124 aaKnown RBP10.06□□□□□ -0.8
TPM1-216ENST00000558910 CSNK2BP67870 215 aa10.06□□□□□ -0.8
TPM1-216ENST00000558910 ELF3P78545 371 aaPredicted RBP10.06□□□□□ -0.8
TPM1-216ENST00000558910 ESCO2Q56NI9 601 aa10.06□□□□□ -0.8
TPM1-216ENST00000558910 SLX4IPQ5VYV7 408 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms