RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 DNAJA3Q96EY1 480 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 ADAT3Q96EY9 351 aaPredicted RBP7.34□□□□□ -1.23
SPG11-209ENST00000558253 PGAM5Q96HS1 289 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 NECAB3Q96P71 396 aaPredicted RBP7.34□□□□□ -1.23
SPG11-209ENST00000558253 TECTBQ96PL2 329 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 TAAR9Q96RI9 348 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 CITED4Q96RK1 184 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 CDC6Q99741 560 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 GPR87Q9BY21 358 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 OR10A2Q9H208 303 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 POFUT1Q9H488 388 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 RGCCQ9H4X1 137 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 BEX1Q9HBH7 125 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 ZNF160Q9HCG1 818 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 GPR84Q9NQS5 396 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 PCDHB16Q9NRJ7 776 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 ASH2LQ9UBL3 628 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 SHPKQ9UHJ6 478 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 MRPS28Q9Y2Q9 187 aaKnown RBP7.34□□□□□ -1.23
SPG11-209ENST00000558253 PCDHGA1Q9Y5H4 931 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 V9GYS6 101 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 SPTBP11277 2137 aa7.34□□□□□ -1.23
SPG11-209ENST00000558253 OR14I1A6ND48 311 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 A6NL46 340 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 CEACAM18A8MTB9 384 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 SERPINE3A8MV23 424 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 SHISA8B8ZZ34 492 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 G3V3Q6 166 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 AGRPO00253 132 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 RP2O75695 350 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 B3GALNT1O75752 331 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 DHRS3O75911 302 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 SLC25A4P12235 298 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 PTHLHP12272 177 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 PPP3CBP16298 524 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 ZNF28P17035 718 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 ENPP1P22413 925 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 OTX1P32242 354 aaPredicted RBP7.33□□□□□ -1.24
SPG11-209ENST00000558253 CASRP41180 1078 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 CARD18P57730 90 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 TAS2R46P59540 309 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 CXADRP78310 365 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 CYCSP99999 105 aaKnown RBP7.33□□□□□ -1.24
SPG11-209ENST00000558253 SCRN3Q0VDG4 424 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 SGCAQ16586 387 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 TOR2AQ5JU69 321 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 GLIPR1L1Q6UWM5 242 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 SLC16A14Q7RTX9 510 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 LYG2Q86SG7 212 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 BIVMQ86UB2 503 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 FJX1Q86VR8 437 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 LSRQ86X29 649 aaPredicted RBP7.33□□□□□ -1.24
SPG11-209ENST00000558253 COMMD2Q86X83 199 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 ZNF101Q8IZC7 436 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 TMEM123Q8N131 208 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 BEST3Q8N1M1 668 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 PAQR4Q8N4S7 273 aaPredicted RBP7.33□□□□□ -1.24
SPG11-209ENST00000558253 FAM89BQ8N5H3 189 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 CHST4Q8NCG5 386 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 OR8B12Q8NGG6 310 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 OR14K1Q8NGZ2 314 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 OR8S1Q8NH09 359 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 MAFAQ8NHW3 353 aaPredicted RBP7.33□□□□□ -1.24
SPG11-209ENST00000558253 SSC4DQ8WTU2 575 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 EDARADDQ8WWZ3 215 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 SPSB1Q96BD6 273 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 RAB3CQ96E17 227 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 PHB2Q99623 299 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 DPCDQ9BVM2 203 aaPredicted RBP7.33□□□□□ -1.24
SPG11-209ENST00000558253 CHIAQ9BZP6 476 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 SLC6A15Q9H2J7 730 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 PROK2Q9HC23 129 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 COMMD9Q9P000 198 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 FOXD3Q9UJU5 478 aaPredicted RBP7.33□□□□□ -1.24
SPG11-209ENST00000558253 SESN1Q9Y6P5 492 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 ABCA7Q8IZY2 2146 aa7.33□□□□□ -1.24
SPG11-209ENST00000558253 EXPH5Q8NEV8 1989 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 TMEM235A6NFC5 223 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 C21orf140B9A014 251 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 GOSR2O14653 212 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 RER1O15258 196 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 CDC14BO60729 498 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 OR2F2O95006 317 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 HCKP08631 526 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 CCL3P10147 92 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 NAT2P11245 290 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 CCL4P13236 92 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 CNR1P21554 472 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 CD34P28906 385 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 PTGFRP43088 359 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 PRKXP51817 358 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 FOXL2P58012 376 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 B2MP61769 119 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 SPEM2Q0P670 501 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 UNC119Q13432 240 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 OR2F1Q13607 317 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 EXOSC2Q13868 293 aaKnown RBP7.32□□□□□ -1.24
SPG11-209ENST00000558253 ENDOGQ14249 297 aaKnown RBP7.32□□□□□ -1.24
SPG11-209ENST00000558253 ZNF345Q14585 488 aa7.32□□□□□ -1.24
SPG11-209ENST00000558253 RAB35Q15286 201 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms