RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 MARC1Q5VT66 337 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 ZNF343Q6P1L6 599 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 METTL7BQ6UX53 244 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 ZNF493Q6ZR52 646 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 RNF165Q6ZSG1 346 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 SLC7A5P1Q8MH63 180 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 PGAM4Q8N0Y7 254 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 FAM71E2Q8N5Q1 922 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 TMEM251Q8N6I4 163 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 METTL13Q8N6R0 699 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 ACBD4Q8NC06 268 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 CCDC112Q8NEF3 446 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 OR2L5Q8NG80 312 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 OR11H7Q8NGC8 314 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 OR10AD1Q8NGE0 317 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 OR2L2Q8NH16 312 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 OR6X1Q8NH79 312 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 NEIL3Q8TAT5 605 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 NT5CQ8TCD5 201 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 C7orf33Q8WU49 177 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 NTAN1Q96AB6 310 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 VOPP1Q96AW1 172 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 DCPSQ96C86 337 aaKnown RBP2.84□□□□□ -1.95
TDP1-217ENST00000557782 HAUS1Q96CS2 278 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 ZMYND19Q96E35 227 aaPredicted RBP2.84□□□□□ -1.95
TDP1-217ENST00000557782 WDR34Q96EX3 536 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 ZNF488Q96MN9 340 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 APOL4Q9BPW4 351 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 NRIP2Q9BQI9 281 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 SLIRPQ9GZT3 109 aaKnown RBP2.84□□□□□ -1.95
TDP1-217ENST00000557782 NXF2Q9GZY0 626 aaKnown RBP2.84□□□□□ -1.95
TDP1-217ENST00000557782 PARP12Q9H0J9 701 aaKnown RBP2.84□□□□□ -1.95
TDP1-217ENST00000557782 RDH14Q9HBH5 336 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 ABCB9Q9NP78 766 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 SPANXB1Q9NS25 103 aaPredicted RBP2.84□□□□□ -1.95
TDP1-217ENST00000557782 PLEKHJ1Q9NW61 149 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 UVRAGQ9P2Y5 699 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 PCYOX1Q9UHG3 505 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 TFR2Q9UP52 801 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 SIGLEC9Q9Y336 463 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 NEUROG3Q9Y4Z2 214 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 POLR3HQ9Y535 204 aaPredicted RBP2.84□□□□□ -1.95
TDP1-217ENST00000557782 UBIAD1Q9Y5Z9 338 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 CAMTA1Q9Y6Y1 1673 aa2.84□□□□□ -1.95
TDP1-217ENST00000557782 POGZQ7Z3K3 1410 aa2.84□□□□□ -1.96
TDP1-217ENST00000557782 A0A0J9YWU9 116 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 A0A1W2PPR1 153 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 GJE1A6NN92 205 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 C9J4A7 227 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 FTCDNL1E5RQL4 147 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 TCAPO15273 167 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 SLC16A4O15374 487 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 ATP8B1O43520 1251 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 RAD1O60671 282 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 APOEP02649 317 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 SERPINA6P08185 405 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 GNAO1P09471 354 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 CD3GP09693 182 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 LIMS3P0CW19 117 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 LIMS4P0CW20 117 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 RNF224P0DH78 156 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 HIST1H1CP16403 213 aaKnown RBP2.83□□□□□ -1.96
TDP1-217ENST00000557782 MAGP20916 626 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 GABRR1P24046 479 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 HTR1DP28221 377 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 GTF2H1P32780 548 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 GGT2P36268 569 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 CDKN2CP42773 168 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 RPS9P46781 194 aaKnown RBP2.83□□□□□ -1.96
TDP1-217ENST00000557782 NCBP2P52298 156 aaKnown RBP eCLIP2.83□□□□□ -1.96
TDP1-217ENST00000557782 STC1P52823 247 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 AQP5P55064 265 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 RAB38P57729 211 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 OR10A3P58181 314 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 MTPNP58546 118 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 TAS2R31P59538 309 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 RAB8AP61006 207 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 TIMM10P62072 90 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 CACNG7P62955 275 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 SMARCB1Q12824 385 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 STX5Q13190 355 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 Q1RN00 199 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 CDNFQ49AH0 187 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 PIGGQ5H8A4 983 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 DRAM2Q6UX65 266 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 LINC00173Q6ZV60 143 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 STRADAQ7RTN6 431 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 C10orf107Q8IVU9 208 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 SPICQ8N5J4 248 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 POM121L12Q8N7R1 296 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 CDC26Q8NHZ8 85 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 RNF133Q8WVZ7 376 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 RPUSD4Q96CM3 377 aaKnown RBP2.83□□□□□ -1.96
TDP1-217ENST00000557782 SOSTQ9BQB4 213 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 EXOSC4Q9NPD3 245 aaKnown RBP2.83□□□□□ -1.96
TDP1-217ENST00000557782 SLCO1B3Q9NPD5 702 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 DNAJC27Q9NZQ0 273 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 PROCRQ9UNN8 238 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 HEBP2Q9Y5Z4 205 aa2.83□□□□□ -1.96
TDP1-217ENST00000557782 MAP3K5Q99683 1374 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms