RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 SPRNQ5BIV9 151 aa11.51□□□□□ -0.57
SHMT2-228ENST00000557302 ZNF684Q5T5D7 378 aa11.51□□□□□ -0.57
SHMT2-228ENST00000557302 BCL2L15Q5TBC7 163 aa11.51□□□□□ -0.57
SHMT2-228ENST00000557302 LIPNQ5VXI9 398 aa11.51□□□□□ -0.57
SHMT2-228ENST00000557302 COMMD2Q86X83 199 aa11.51□□□□□ -0.57
SHMT2-228ENST00000557302 FTMTQ8N4E7 242 aa11.51□□□□□ -0.57
SHMT2-228ENST00000557302 ACBD7Q8N6N7 88 aa11.51□□□□□ -0.57
SHMT2-228ENST00000557302 CSNK2A3Q8NEV1 391 aa11.51□□□□□ -0.57
SHMT2-228ENST00000557302 CNIH3Q8TBE1 160 aa11.51□□□□□ -0.57
SHMT2-228ENST00000557302 CCL17Q92583 94 aa11.51□□□□□ -0.57
SHMT2-228ENST00000557302 MRPL48Q96GC5 212 aaKnown RBP11.51□□□□□ -0.57
SHMT2-228ENST00000557302 MEGF10Q96KG7 1140 aa11.51□□□□□ -0.57
SHMT2-228ENST00000557302 SIGLEC11Q96RL6 698 aa11.51□□□□□ -0.57
SHMT2-228ENST00000557302 ADAT1Q9BUB4 502 aaKnown RBP11.51□□□□□ -0.57
SHMT2-228ENST00000557302 VCX3BQ9H321 246 aa11.51□□□□□ -0.57
SHMT2-228ENST00000557302 SNX5Q9Y5X3 404 aa11.51□□□□□ -0.57
SHMT2-228ENST00000557302 CACNG2Q9Y698 323 aa11.51□□□□□ -0.57
SHMT2-228ENST00000557302 HSPE1-MOB4S4R3N1 261 aa11.51□□□□□ -0.57
SHMT2-228ENST00000557302 CHD3Q12873 2000 aaKnown RBP11.5□□□□□ -0.57
SHMT2-228ENST00000557302 IGHV4-61A0A0C4DH41 118 aa11.5□□□□□ -0.57
SHMT2-228ENST00000557302 CLDN25C9JDP6 229 aa11.5□□□□□ -0.57
SHMT2-228ENST00000557302 GMDSO60547 372 aa11.5□□□□□ -0.57
SHMT2-228ENST00000557302 PNPP00491 289 aa11.5□□□□□ -0.57
SHMT2-228ENST00000557302 TACSTD2P09758 323 aa11.5□□□□□ -0.57
SHMT2-228ENST00000557302 CHN2P52757 468 aa11.5□□□□□ -0.57
SHMT2-228ENST00000557302 ISL1P61371 349 aa11.5□□□□□ -0.57
SHMT2-228ENST00000557302 RIPK1Q13546 671 aa11.5□□□□□ -0.57
SHMT2-228ENST00000557302 OR8B8Q15620 311 aa11.5□□□□□ -0.57
SHMT2-228ENST00000557302 SMN1Q16637 294 aaKnown RBP11.5□□□□□ -0.57
SHMT2-228ENST00000557302 TP53I3Q53FA7 332 aa11.5□□□□□ -0.57
SHMT2-228ENST00000557302 KLHL22Q53GT1 634 aa11.5□□□□□ -0.57
SHMT2-228ENST00000557302 CLEC9AQ6UXN8 241 aa11.5□□□□□ -0.57
SHMT2-228ENST00000557302 KLBQ86Z14 1044 aa11.5□□□□□ -0.57
SHMT2-228ENST00000557302 C8orf59Q8N0T1 100 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-228ENST00000557302 TIMD4Q96H15 378 aa11.5□□□□□ -0.57
SHMT2-228ENST00000557302 LYZL4Q96KX0 146 aa11.5□□□□□ -0.57
SHMT2-228ENST00000557302 MYCBPQ99417 103 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-228ENST00000557302 SMR3AQ99954 134 aa11.5□□□□□ -0.57
SHMT2-228ENST00000557302 GSX1Q9H4S2 264 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-228ENST00000557302 G6PC2Q9NQR9 355 aa11.5□□□□□ -0.57
SHMT2-228ENST00000557302 ACOXLQ9NUZ1 547 aa11.5□□□□□ -0.57
SHMT2-228ENST00000557302 MRPS18AQ9NVS2 196 aaKnown RBP11.5□□□□□ -0.57
SHMT2-228ENST00000557302 TREM2Q9NZC2 230 aa11.5□□□□□ -0.57
SHMT2-228ENST00000557302 GNG8Q9UK08 70 aa11.5□□□□□ -0.57
SHMT2-228ENST00000557302 OR52A1Q9UKL2 312 aa11.5□□□□□ -0.57
SHMT2-228ENST00000557302 PPP1R3CQ9UQK1 317 aa11.5□□□□□ -0.57
SHMT2-228ENST00000557302 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-228ENST00000557302 H0YJX3 145 aa11.49□□□□□ -0.57
SHMT2-228ENST00000557302 IFNL4K9M1U5 179 aa11.49□□□□□ -0.57
SHMT2-228ENST00000557302 TTRP02766 147 aa11.49□□□□□ -0.57
SHMT2-228ENST00000557302 GNAO1P09471 354 aa11.49□□□□□ -0.57
SHMT2-228ENST00000557302 GNALP38405 381 aa11.49□□□□□ -0.57
SHMT2-228ENST00000557302 CD200P41217 278 aa11.49□□□□□ -0.57
SHMT2-228ENST00000557302 AQP4P55087 323 aa11.49□□□□□ -0.57
SHMT2-228ENST00000557302 ACTA2P62736 377 aa11.49□□□□□ -0.57
SHMT2-228ENST00000557302 ACTG2P63267 376 aa11.49□□□□□ -0.57
SHMT2-228ENST00000557302 MZT1Q08AG7 82 aa11.49□□□□□ -0.57
SHMT2-228ENST00000557302 TMEM249Q2WGJ8 235 aa11.49□□□□□ -0.57
SHMT2-228ENST00000557302 CDONQ4KMG0 1287 aa11.49□□□□□ -0.57
SHMT2-228ENST00000557302 KCTD20Q7Z5Y7 419 aa11.49□□□□□ -0.57
SHMT2-228ENST00000557302 PEG10Q86TG7 708 aaKnown RBP11.49□□□□□ -0.57
SHMT2-228ENST00000557302 ELMOD2Q8IZ81 293 aa11.49□□□□□ -0.57
SHMT2-228ENST00000557302 CELF2-AS1Q8N7Q2 184 aa11.49□□□□□ -0.57
SHMT2-228ENST00000557302 SPERTQ8NA61 448 aa11.49□□□□□ -0.57
SHMT2-228ENST00000557302 OR52I1Q8NGK6 324 aa11.49□□□□□ -0.57
SHMT2-228ENST00000557302 OR51E1Q8TCB6 317 aa11.49□□□□□ -0.57
SHMT2-228ENST00000557302 TFAP2CQ92754 450 aa11.49□□□□□ -0.57
SHMT2-228ENST00000557302 RAB1CQ92928 201 aa11.49□□□□□ -0.57
SHMT2-228ENST00000557302 ITFG2Q969R8 447 aa11.49□□□□□ -0.57
SHMT2-228ENST00000557302 PPP1R14AQ96A00 147 aa11.49□□□□□ -0.57
SHMT2-228ENST00000557302 FAM71F1Q96KD3 344 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-228ENST00000557302 PAPOLGQ9BWT3 736 aaKnown RBP11.49□□□□□ -0.57
SHMT2-228ENST00000557302 GCM1Q9NP62 436 aa11.49□□□□□ -0.57
SHMT2-228ENST00000557302 GPR84Q9NQS5 396 aa11.49□□□□□ -0.57
SHMT2-228ENST00000557302 INPP5EQ9NRR6 644 aa11.49□□□□□ -0.57
SHMT2-228ENST00000557302 TMEM106BQ9NUM4 274 aa11.49□□□□□ -0.57
SHMT2-228ENST00000557302 MYRFQ9Y2G1 1151 aa11.49□□□□□ -0.57
SHMT2-228ENST00000557302 RHBDD3Q9Y3P4 386 aa11.49□□□□□ -0.57
SHMT2-228ENST00000557302 IGHV3-64DA0A0J9YX35 117 aa11.48□□□□□ -0.57
SHMT2-228ENST00000557302 IRGMA1A4Y4 181 aa11.48□□□□□ -0.57
SHMT2-228ENST00000557302 FAM20BO75063 409 aa11.48□□□□□ -0.57
SHMT2-228ENST00000557302 ATP6V1G2O95670 118 aa11.48□□□□□ -0.57
SHMT2-228ENST00000557302 LY6G6DO95868 133 aa11.48□□□□□ -0.57
SHMT2-228ENST00000557302 IGLV3-1P01715 115 aa11.48□□□□□ -0.57
SHMT2-228ENST00000557302 IGHA1P01876 353 aa11.48□□□□□ -0.57
SHMT2-228ENST00000557302 ATP6V1B1P15313 513 aa11.48□□□□□ -0.57
SHMT2-228ENST00000557302 ACKR3P25106 362 aa11.48□□□□□ -0.57
SHMT2-228ENST00000557302 GATA4P43694 442 aa11.48□□□□□ -0.57
SHMT2-228ENST00000557302 MAP2K3P46734 347 aa11.48□□□□□ -0.57
SHMT2-228ENST00000557302 MVKQ03426 396 aa11.48□□□□□ -0.57
SHMT2-228ENST00000557302 MAB21L1Q13394 359 aa11.48□□□□□ -0.57
SHMT2-228ENST00000557302 C6orf52Q5T4I8 152 aa11.48□□□□□ -0.57
SHMT2-228ENST00000557302 AVPI1Q5T686 147 aa11.48□□□□□ -0.57
SHMT2-228ENST00000557302 MOGAT3Q86VF5 341 aa11.48□□□□□ -0.57
SHMT2-228ENST00000557302 CATSPERDQ86XM0 798 aa11.48□□□□□ -0.57
SHMT2-228ENST00000557302 OR8S1Q8NH09 359 aa11.48□□□□□ -0.57
SHMT2-228ENST00000557302 RORBQ92753 470 aa11.48□□□□□ -0.57
SHMT2-228ENST00000557302 DVL3Q92997 716 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-228ENST00000557302 ERGIC1Q969X5 290 aa11.48□□□□□ -0.57
SHMT2-228ENST00000557302 SOX7Q9BT81 388 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms