RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 IQCF6A8MYZ5 107 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 M0QYG6 137 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 M0R1W7 72 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 MLNRO43193 412 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 RNF13O43567 381 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 SYNGR1O43759 233 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 PLIN3O60664 434 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 TRMUO75648 421 aaKnown RBP3.75□□□□□ -1.81
SCFD1-223ENST00000557076 KRT75O95678 551 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 PTBP3O95758 552 aaKnown RBP3.75□□□□□ -1.81
SCFD1-223ENST00000557076 C1QCP02747 245 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 HIST1H2ABP04908 130 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 ALDOBP05062 364 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 ACADSP16219 412 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 FPR3P25089 353 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 HTR2AP28223 471 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 CD200P41217 278 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 CCT5P48643 541 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 ERFP50548 548 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 ZNF134P52741 427 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 MVDP53602 400 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 RAD23AP54725 363 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 UCP3P55916 312 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 BLCAPP62952 87 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 ERVK-25P63136 954 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 LRRC74AQ0VAA2 488 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 OR1Q1Q15612 314 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 OR8B8Q15620 311 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 MPPED2Q15777 294 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 INTS11Q5TA45 600 aaKnown RBP3.75□□□□□ -1.81
SCFD1-223ENST00000557076 OR2T2Q6IF00 324 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 ZNF621Q6ZSS3 439 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 HIST3H2AQ7L7L0 130 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 HDDC2Q7Z4H3 204 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 PIGWQ7Z7B1 504 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 NUDCD3Q8IVD9 361 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 OR5AS1Q8N127 324 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 C10orf111Q8N326 155 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 C10orf53Q8N6V4 93 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 C19orf18Q8NEA5 215 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 SPATA4Q8NEY3 305 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 OR51D1Q8NGF3 324 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 OR5D13Q8NGL4 314 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 RORBQ92753 470 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 HIST1H2ACQ93077 130 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 MYDGFQ969H8 173 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 RASD2Q96D21 266 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 RITA1Q96K30 269 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 SNX22Q96L94 193 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 OR5M11Q96RB7 305 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 NKX3-1Q99801 234 aaPredicted RBP3.75□□□□□ -1.81
SCFD1-223ENST00000557076 WDR12Q9GZL7 423 aaKnown RBP3.75□□□□□ -1.81
SCFD1-223ENST00000557076 METTL8Q9H825 291 aaKnown RBP3.75□□□□□ -1.81
SCFD1-223ENST00000557076 CACYBPQ9HB71 228 aaKnown RBP3.75□□□□□ -1.81
SCFD1-223ENST00000557076 TMEM27Q9HBJ8 222 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 BCL2L10Q9HD36 194 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 KCNK9Q9NPC2 374 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 ZDHHC18Q9NUE0 388 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 TBC1D23Q9NUY8 699 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 STX18Q9P2W9 335 aaKnown RBP3.75□□□□□ -1.81
SCFD1-223ENST00000557076 ONECUT1Q9UBC0 465 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 P2RX2Q9UBL9 471 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 GIMAP2Q9UG22 337 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 FIS1Q9Y3D6 152 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 SMAD5-AS1Q9Y6J3 95 aa3.75□□□□□ -1.81
SCFD1-223ENST00000557076 KMT2AQ03164 3969 aa3.74□□□□□ -1.81
SCFD1-223ENST00000557076 A0A087WUV0 522 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-223ENST00000557076 A0A1W2PRG6 482 aa3.74□□□□□ -1.81
SCFD1-223ENST00000557076 A6NDX4 124 aa3.74□□□□□ -1.81
SCFD1-223ENST00000557076 FAM90A10PA6NDY2 464 aa3.74□□□□□ -1.81
SCFD1-223ENST00000557076 LRRN3E7EW58 273 aa3.74□□□□□ -1.81
SCFD1-223ENST00000557076 HDAC3O15379 428 aa3.74□□□□□ -1.81
SCFD1-223ENST00000557076 FMO6PO60774 539 aa3.74□□□□□ -1.81
SCFD1-223ENST00000557076 GLCEO94923 617 aa3.74□□□□□ -1.81
SCFD1-223ENST00000557076 CH25HO95992 272 aa3.74□□□□□ -1.81
SCFD1-223ENST00000557076 IGF2P01344 180 aa3.74□□□□□ -1.81
SCFD1-223ENST00000557076 GYPAP02724 150 aa3.74□□□□□ -1.81
SCFD1-223ENST00000557076 HLA-DPB1P04440 258 aa3.74□□□□□ -1.81
SCFD1-223ENST00000557076 GRPP07492 148 aa3.74□□□□□ -1.81
SCFD1-223ENST00000557076 ASAH2BP0C7U1 165 aa3.74□□□□□ -1.81
SCFD1-223ENST00000557076 NR2C1P13056 603 aa3.74□□□□□ -1.81
SCFD1-223ENST00000557076 ETS2P15036 469 aa3.74□□□□□ -1.81
SCFD1-223ENST00000557076 MUC1P15941 1255 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-223ENST00000557076 GCAP28676 217 aa3.74□□□□□ -1.81
SCFD1-223ENST00000557076 LAP3P28838 519 aa3.74□□□□□ -1.81
SCFD1-223ENST00000557076 SLC6A1P30531 599 aa3.74□□□□□ -1.81
SCFD1-223ENST00000557076 PRKAR1BP31321 381 aa3.74□□□□□ -1.81
SCFD1-223ENST00000557076 S100A3P33764 101 aa3.74□□□□□ -1.81
SCFD1-223ENST00000557076 MYCNOSP40205 109 aa3.74□□□□□ -1.81
SCFD1-223ENST00000557076 VDAC2P45880 294 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-223ENST00000557076 TGM4P49221 684 aa3.74□□□□□ -1.81
SCFD1-223ENST00000557076 THBS3P49746 956 aa3.74□□□□□ -1.81
SCFD1-223ENST00000557076 BMXP51813 675 aa3.74□□□□□ -1.81
SCFD1-223ENST00000557076 CDH12P55289 794 aa3.74□□□□□ -1.81
SCFD1-223ENST00000557076 TPTEP56180 551 aa3.74□□□□□ -1.81
SCFD1-223ENST00000557076 IL5RAQ01344 420 aa3.74□□□□□ -1.81
SCFD1-223ENST00000557076 BLMHQ13867 455 aa3.74□□□□□ -1.81
SCFD1-223ENST00000557076 MELKQ14680 651 aa3.74□□□□□ -1.81
SCFD1-223ENST00000557076 ZNF74Q16587 644 aa3.74□□□□□ -1.81
SCFD1-223ENST00000557076 ARMC4Q5T2S8 1044 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms