RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 HEATR5BQ9P2D3 2071 aa3.9□□□□□ -1.78
SRP54-212ENST00000556992 USP9XQ93008 2570 aaPredicted RBP3.9□□□□□ -1.78
SRP54-212ENST00000556992 PLXND1Q9Y4D7 1925 aa3.9□□□□□ -1.78
SRP54-212ENST00000556992 A0A1W2PQ09 198 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 OR5H15A6NDH6 313 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 ANXA2P2A6NMY6 339 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 CENPXA8MT69 81 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 CDRT15L2A8MXV6 281 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 ZNF814B7Z6K7 855 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 TNFSF11O14788 317 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 CTDSPLO15194 276 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 SMAD9O15198 467 aaKnown RBP3.9□□□□□ -1.79
SRP54-212ENST00000556992 MAGEB3O15480 346 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 GSTZ1O43708 216 aaPredicted RBP3.9□□□□□ -1.79
SRP54-212ENST00000556992 CXCL13O43927 109 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 NME2P1O60361 137 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 SRSF10O75494 262 aaKnown RBP3.9□□□□□ -1.79
SRP54-212ENST00000556992 UBL3O95164 117 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 SYNGR4O95473 234 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 ACTL6AO96019 429 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 PNPP00491 289 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 HLA-DQB1P01920 261 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 ANXA2P07355 339 aaKnown RBP3.9□□□□□ -1.79
SRP54-212ENST00000556992 ERCC1P07992 297 aaPredicted RBP3.9□□□□□ -1.79
SRP54-212ENST00000556992 CSF3P09919 207 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 RFPL3SP0C7P2 107 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 GSTT2BP0CG30 244 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 UBCP0CG48 685 aaKnown RBP3.9□□□□□ -1.79
SRP54-212ENST00000556992 CD37P11049 281 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 LIPCP11150 499 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 ATF1P18846 271 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 MSR1P21757 451 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 HSD11B1P28845 292 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 RPS27P42677 84 aaKnown RBP3.9□□□□□ -1.79
SRP54-212ENST00000556992 KIR3DL2P43630 455 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 SOX2P48431 317 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 STARP49675 285 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 MMP15P51511 669 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 CLDN15P56746 228 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 CLDN20P56880 219 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 OR10A3P58181 314 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 PCBD1P61457 104 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 PPIAP62937 165 aaKnown RBP3.9□□□□□ -1.79
SRP54-212ENST00000556992 GRB2P62993 217 aaKnown RBP3.9□□□□□ -1.79
SRP54-212ENST00000556992 MRPS10P82664 201 aaKnown RBP3.9□□□□□ -1.79
SRP54-212ENST00000556992 MRPS34P82930 218 aaKnown RBP3.9□□□□□ -1.79
SRP54-212ENST00000556992 PLGLB1Q02325 96 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 MFAP5Q13361 173 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 SLC10A1Q14973 349 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 TAB1Q15750 504 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 STK11Q15831 433 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 ZNF79Q15937 498 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 SLC25A35Q3KQZ1 300 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 UBE2NLQ5JXB2 153 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 RIPPLY2Q5TAB7 128 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 GLT8D1Q68CQ7 371 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 OR7E24Q6IFN5 339 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 CCBE1Q6UXH8 406 aaPredicted RBP3.9□□□□□ -1.79
SRP54-212ENST00000556992 LINC00696Q6ZRV3 163 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 FOXL2NBQ6ZUU3 175 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 CHMP1BQ7LBR1 199 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 AAED1Q7RTV5 226 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 LRRTM1Q86UE6 522 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 SERPINA12Q8IW75 414 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 CDH26Q8IXH8 852 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 TMEM123Q8N131 208 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 GPR137CQ8N3F9 429 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 CCDC54Q8NEL0 328 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 IL17RDQ8NFM7 739 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 OR4M1Q8NGD0 313 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 OR13C5Q8NGS8 318 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 OR10D3Q8NH80 312 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 TSEN15Q8WW01 171 aaKnown RBP3.9□□□□□ -1.79
SRP54-212ENST00000556992 FCAMRQ8WWV6 532 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 HSD17B8Q92506 261 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 RGP1Q92546 391 aaPredicted RBP3.9□□□□□ -1.79
SRP54-212ENST00000556992 HTRA1Q92743 480 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 CPNE4Q96A23 557 aaPredicted RBP3.9□□□□□ -1.79
SRP54-212ENST00000556992 TMEM106AQ96A25 262 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 PHF21AQ96BD5 680 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 ZFP3Q96NJ6 502 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 FOXN4Q96NZ1 517 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 RBM24Q9BX46 236 aaKnown RBP3.9□□□□□ -1.79
SRP54-212ENST00000556992 PBOV1Q9GZY1 135 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 MOB1AQ9H8S9 216 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 ACKR4Q9NPB9 350 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 DIABLOQ9NR28 239 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 POLE4Q9NR33 117 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 SLC17A5Q9NRA2 495 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 ZNF275Q9NSD4 429 aaPredicted RBP3.9□□□□□ -1.79
SRP54-212ENST00000556992 DEPPQ9NTK1 212 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 NPAP1Q9NZP6 1156 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 EMC3Q9P0I2 261 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 STEAP1Q9UHE8 339 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 GTF2A1LQ9UNN4 478 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 SLC22A13Q9Y226 551 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 MRPS7Q9Y2R9 242 aaKnown RBP3.9□□□□□ -1.79
SRP54-212ENST00000556992 POLR1DQ9Y2S0 133 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 LRP12Q9Y561 859 aa3.9□□□□□ -1.79
SRP54-212ENST00000556992 TIMM10BQ9Y5J6 103 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms