RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 G6PC2Q9NQR9 355 aa6.17□□□□□ -1.42
SCFD1-222ENST00000556768 DDX28Q9NUL7 540 aaKnown RBP6.17□□□□□ -1.42
SCFD1-222ENST00000556768 ARMC1Q9NVT9 282 aa6.17□□□□□ -1.42
SCFD1-222ENST00000556768 PDP1Q9P0J1 537 aaPredicted RBP6.17□□□□□ -1.42
SCFD1-222ENST00000556768 COMMD3-BMI1R4GMX3 469 aa6.17□□□□□ -1.42
SCFD1-222ENST00000556768 ANKRD30BLA7E2S9 258 aa6.16□□□□□ -1.42
SCFD1-222ENST00000556768 CD300LBA8K4G0 201 aa6.16□□□□□ -1.42
SCFD1-222ENST00000556768 PRR23D1E9PI22 279 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-222ENST00000556768 F5H5P2 479 aa6.16□□□□□ -1.42
SCFD1-222ENST00000556768 TRIM77I1YAP6 450 aa6.16□□□□□ -1.42
SCFD1-222ENST00000556768 ACOT8O14734 319 aa6.16□□□□□ -1.42
SCFD1-222ENST00000556768 XRCC2O43543 280 aa6.16□□□□□ -1.42
SCFD1-222ENST00000556768 FSTL3O95633 263 aa6.16□□□□□ -1.42
SCFD1-222ENST00000556768 HLA-DPB1P04440 258 aa6.16□□□□□ -1.42
SCFD1-222ENST00000556768 GYPBP06028 91 aa6.16□□□□□ -1.42
SCFD1-222ENST00000556768 ANXA2P07355 339 aaKnown RBP6.16□□□□□ -1.42
SCFD1-222ENST00000556768 CLEC2LP0C7M8 214 aa6.16□□□□□ -1.42
SCFD1-222ENST00000556768 PRR23D2P0DMB1 279 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-222ENST00000556768 RPS2P15880 293 aaKnown RBP6.16□□□□□ -1.42
SCFD1-222ENST00000556768 CA6P23280 308 aa6.16□□□□□ -1.42
SCFD1-222ENST00000556768 RPS27P42677 84 aaKnown RBP6.16□□□□□ -1.42
SCFD1-222ENST00000556768 PRKXP51817 358 aa6.16□□□□□ -1.42
SCFD1-222ENST00000556768 GNB2P62879 340 aa6.16□□□□□ -1.42
SCFD1-222ENST00000556768 EIF2B1Q14232 305 aaKnown RBP6.16□□□□□ -1.42
SCFD1-222ENST00000556768 ZMYND11Q15326 602 aa6.16□□□□□ -1.42
SCFD1-222ENST00000556768 SNCBQ16143 134 aa6.16□□□□□ -1.42
SCFD1-222ENST00000556768 TIGD6Q17RP2 521 aa6.16□□□□□ -1.42
SCFD1-222ENST00000556768 ZNF181Q2M3W8 571 aa6.16□□□□□ -1.42
SCFD1-222ENST00000556768 RSPO1Q2MKA7 263 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-222ENST00000556768 ARMCX4Q5H9R4 360 aa6.16□□□□□ -1.42
SCFD1-222ENST00000556768 ZNF362Q5T0B9 420 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-222ENST00000556768 DPY19L4Q7Z388 723 aa6.16□□□□□ -1.42
SCFD1-222ENST00000556768 NAA40Q86UY6 237 aa6.16□□□□□ -1.42
SCFD1-222ENST00000556768 MOGAT3Q86VF5 341 aa6.16□□□□□ -1.42
SCFD1-222ENST00000556768 ERI1Q8IV48 349 aaKnown RBP6.16□□□□□ -1.42
SCFD1-222ENST00000556768 OR52H1Q8NGJ2 320 aa6.16□□□□□ -1.42
SCFD1-222ENST00000556768 OR8D4Q8NGM9 314 aa6.16□□□□□ -1.42
SCFD1-222ENST00000556768 OR8S1Q8NH09 359 aa6.16□□□□□ -1.42
SCFD1-222ENST00000556768 DDOQ99489 341 aa6.16□□□□□ -1.42
SCFD1-222ENST00000556768 NIPSNAP1Q9BPW8 284 aa6.16□□□□□ -1.42
SCFD1-222ENST00000556768 OR51V1Q9H2C8 321 aa6.16□□□□□ -1.42
SCFD1-222ENST00000556768 TRIM36Q9NQ86 728 aa6.16□□□□□ -1.42
SCFD1-222ENST00000556768 MRPL15Q9P015 296 aaKnown RBP6.16□□□□□ -1.42
SCFD1-222ENST00000556768 KIF17Q9P2E2 1029 aa6.16□□□□□ -1.42
SCFD1-222ENST00000556768 LRCH1Q9Y2L9 728 aa6.16□□□□□ -1.42
SCFD1-222ENST00000556768 PPIAL4AQ9Y536 164 aa6.16□□□□□ -1.42
SCFD1-222ENST00000556768 AUP1Q9Y679 476 aa6.16□□□□□ -1.42
SCFD1-222ENST00000556768 IGHV3-64DA0A0J9YX35 117 aa6.15□□□□□ -1.42
SCFD1-222ENST00000556768 C22orf46C9J442 243 aa6.15□□□□□ -1.42
SCFD1-222ENST00000556768 NDUFA2O43678 99 aa6.15□□□□□ -1.42
SCFD1-222ENST00000556768 ATP5HO75947 161 aa6.15□□□□□ -1.42
SCFD1-222ENST00000556768 GLCEO94923 617 aa6.15□□□□□ -1.42
SCFD1-222ENST00000556768 CYB5R3P00387 301 aaPredicted RBP6.15□□□□□ -1.42
SCFD1-222ENST00000556768 H2BFMP0C1H6 154 aa6.15□□□□□ -1.42
SCFD1-222ENST00000556768 GRK5P34947 590 aa6.15□□□□□ -1.42
SCFD1-222ENST00000556768 ADMP35318 185 aa6.15□□□□□ -1.42
SCFD1-222ENST00000556768 GATA4P43694 442 aa6.15□□□□□ -1.42
SCFD1-222ENST00000556768 ERFP50548 548 aa6.15□□□□□ -1.42
SCFD1-222ENST00000556768 RPS7P62081 194 aaKnown RBP6.15□□□□□ -1.42
SCFD1-222ENST00000556768 DBPQ10586 325 aaPredicted RBP6.15□□□□□ -1.42
SCFD1-222ENST00000556768 PCK2Q16822 640 aa6.15□□□□□ -1.42
SCFD1-222ENST00000556768 KRTAP27-1Q3LI81 207 aa6.15□□□□□ -1.42
SCFD1-222ENST00000556768 KLHL12Q53G59 568 aa6.15□□□□□ -1.42
SCFD1-222ENST00000556768 C1QL2Q7Z5L3 287 aa6.15□□□□□ -1.42
SCFD1-222ENST00000556768 ADGRG5Q8IZF4 528 aa6.15□□□□□ -1.42
SCFD1-222ENST00000556768 OR8B3Q8NGG8 313 aa6.15□□□□□ -1.42
SCFD1-222ENST00000556768 OR6N2Q8NGY6 317 aa6.15□□□□□ -1.42
SCFD1-222ENST00000556768 ZNF420Q8TAQ5 688 aaPredicted RBP6.15□□□□□ -1.42
SCFD1-222ENST00000556768 DNAJC9Q8WXX5 260 aa6.15□□□□□ -1.42
SCFD1-222ENST00000556768 OR8B2Q96RD0 313 aa6.15□□□□□ -1.42
SCFD1-222ENST00000556768 ADAT1Q9BUB4 502 aaKnown RBP6.15□□□□□ -1.42
SCFD1-222ENST00000556768 SSBP3Q9BWW4 388 aaPredicted RBP6.15□□□□□ -1.42
SCFD1-222ENST00000556768 PRRG3Q9BZD7 231 aa6.15□□□□□ -1.42
SCFD1-222ENST00000556768 NMNAT2Q9BZQ4 307 aa6.15□□□□□ -1.42
SCFD1-222ENST00000556768 TMEM165Q9HC07 324 aa6.15□□□□□ -1.42
SCFD1-222ENST00000556768 PNRC2Q9NPJ4 139 aaKnown RBP6.15□□□□□ -1.42
SCFD1-222ENST00000556768 RNF7Q9UBF6 113 aa6.15□□□□□ -1.42
SCFD1-222ENST00000556768 DNAJB9Q9UBS3 223 aa6.15□□□□□ -1.42
SCFD1-222ENST00000556768 CLN8Q9UBY8 286 aa6.15□□□□□ -1.42
SCFD1-222ENST00000556768 NBEAL1Q6ZS30 2694 aa6.15□□□□□ -1.42
SCFD1-222ENST00000556768 MALRD1Q5VYJ5 2156 aa6.15□□□□□ -1.42
SCFD1-222ENST00000556768 FAM183AA6NL82 134 aa6.15□□□□□ -1.43
SCFD1-222ENST00000556768 A6NLC8 198 aa6.15□□□□□ -1.43
SCFD1-222ENST00000556768 CEACAM18A8MTB9 384 aa6.15□□□□□ -1.43
SCFD1-222ENST00000556768 H0YL77 283 aa6.15□□□□□ -1.43
SCFD1-222ENST00000556768 MLNRO43193 412 aa6.15□□□□□ -1.43
SCFD1-222ENST00000556768 LYNP07948 512 aa6.15□□□□□ -1.43
SCFD1-222ENST00000556768 WNT2P09544 360 aa6.15□□□□□ -1.43
SCFD1-222ENST00000556768 CLUP10909 449 aa6.15□□□□□ -1.43
SCFD1-222ENST00000556768 SLC2A1P11166 492 aa6.15□□□□□ -1.43
SCFD1-222ENST00000556768 ADRA2CP18825 462 aa6.15□□□□□ -1.43
SCFD1-222ENST00000556768 ZFP36P26651 326 aaKnown RBP6.15□□□□□ -1.43
SCFD1-222ENST00000556768 PEX2P28328 305 aa6.15□□□□□ -1.43
SCFD1-222ENST00000556768 OTX1P32242 354 aaPredicted RBP6.15□□□□□ -1.43
SCFD1-222ENST00000556768 CX3CR1P49238 355 aa6.15□□□□□ -1.43
SCFD1-222ENST00000556768 ACTG1P63261 375 aa6.15□□□□□ -1.43
SCFD1-222ENST00000556768 CBX1P83916 185 aa6.15□□□□□ -1.43
SCFD1-222ENST00000556768 ZNF92Q03936 586 aa6.15□□□□□ -1.43
SCFD1-222ENST00000556768 ZNF154Q13106 437 aa6.15□□□□□ -1.43
SCFD1-222ENST00000556768 GINS1Q14691 196 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms