RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 ABCA6Q8N139 1617 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 MYO3AQ8NEV4 1616 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 SETBP1Q9Y6X0 1596 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 ATP7AQ04656 1500 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 ARAP3Q8WWN8 1544 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 PRG4Q92954 1404 aaPredicted RBP3.04□□□□□ -1.92
PRPF39-210ENST00000556718 MROH5Q6ZUA9 1318 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 A0A0G2JLM5 398 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 EXOC1LA0A1B0GW35 172 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 PRSS37A4D1T9 235 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 OR5K4A6NMS3 321 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 PDZK1P1A8MUH7 402 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 HIDE1A8MVS5 230 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 TRIM49D1C9J1S8 452 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 ATP6V1G2-DDX39BF2Z307 99 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 GATCO43716 136 aaKnown RBP3.04□□□□□ -1.92
PRPF39-210ENST00000556718 CALUO43852 315 aaPredicted RBP3.04□□□□□ -1.92
PRPF39-210ENST00000556718 DPM1O60762 260 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 CLDN11O75508 207 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 C6orf47O95873 294 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 PTTG1O95997 202 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 INSP01308 110 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 SERPINE2P07093 398 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 SNRPAP09012 282 aaKnown RBP3.04□□□□□ -1.92
PRPF39-210ENST00000556718 HSPD1P10809 573 aaKnown RBP3.04□□□□□ -1.92
PRPF39-210ENST00000556718 CRISP2P16562 243 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 F2RP25116 425 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 COILP38432 576 aaPredicted RBP3.04□□□□□ -1.92
PRPF39-210ENST00000556718 HAAOP46952 286 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 OR1G1P47890 313 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 CSNK1DP48730 415 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 AQP4P55087 323 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 CLDN18P56856 261 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 RAB25P57735 213 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 DAOAP59103 153 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 RAB14P61106 215 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 COPZ1P61923 177 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 SP4Q02446 784 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 CDK10Q15131 360 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 TMED2Q15363 201 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 ANGPT1Q15389 498 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 SGCAQ16586 387 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 KCTD19Q17RG1 926 aaPredicted RBP3.04□□□□□ -1.92
PRPF39-210ENST00000556718 ZNF181Q2M3W8 571 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 Q3ZCU0 254 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 LPCAT4Q643R3 524 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 NANOGP8Q6NSW7 305 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 MBOAT1Q6ZNC8 495 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 ABHD13Q7L211 337 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 CAMK2N1Q7Z7J9 78 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 C12orf56Q8IXR9 622 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 FAM9CQ8IZT9 166 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 C8orf31Q8N9H6 132 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 INO80EQ8NBZ0 244 aaPredicted RBP3.04□□□□□ -1.92
PRPF39-210ENST00000556718 TTLQ8NG68 377 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 TEX47Q8TBZ9 253 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 LRRC20Q8TCA0 184 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 KCTD4Q8WVF5 259 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 MYDGFQ969H8 173 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 IL22RA2Q969J5 263 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 EEF1AKMT3Q96AZ1 226 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 C12orf43Q96C57 262 aaKnown RBP3.04□□□□□ -1.92
PRPF39-210ENST00000556718 CERS2Q96G23 380 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 AURKBQ96GD4 344 aaPredicted RBP3.04□□□□□ -1.92
PRPF39-210ENST00000556718 ARL5BQ96KC2 179 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 TSSK3Q96PN8 268 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 NEUROG2Q9H2A3 272 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 TRIM45Q9H8W5 580 aaPredicted RBP3.04□□□□□ -1.92
PRPF39-210ENST00000556718 EFCAB1Q9HAE3 211 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 CYP3A43Q9HB55 503 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 MMP26Q9NRE1 261 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 SLC25A37Q9NYZ2 338 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 ZNF629Q9UEG4 869 aaPredicted RBP3.04□□□□□ -1.92
PRPF39-210ENST00000556718 TFR2Q9UP52 801 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 RBMX2Q9Y388 322 aaKnown RBP3.04□□□□□ -1.92
PRPF39-210ENST00000556718 CBY1Q9Y3M2 126 aa3.04□□□□□ -1.92
PRPF39-210ENST00000556718 SETD1AO15047 1707 aaKnown RBP3.04□□□□□ -1.92
PRPF39-210ENST00000556718 ZC3H13Q5T200 1668 aaKnown RBP3.04□□□□□ -1.92
PRPF39-210ENST00000556718 TRPM2O94759 1503 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 NFAT5O94916 1531 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 LRRC7Q96NW7 1537 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 MLH3Q9UHC1 1453 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 PLCH2O75038 1416 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 CPDO75976 1380 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 MN1Q10571 1320 aaPredicted RBP3.03□□□□□ -1.92
PRPF39-210ENST00000556718 SPHKAPQ2M3C7 1700 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 PNMA8CA0A1B0GUJ8 204 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 EFCAB10A6NFE3 127 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 SLC9A3R1O14745 358 aaPredicted RBP3.03□□□□□ -1.92
PRPF39-210ENST00000556718 SCAMP2O15127 329 aaKnown RBP3.03□□□□□ -1.92
PRPF39-210ENST00000556718 SPOPO43791 374 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 PSIP1O75475 530 aaKnown RBP3.03□□□□□ -1.92
PRPF39-210ENST00000556718 HSBP1O75506 76 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 FCN3O75636 299 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 RAB3DO95716 219 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 LSM8O95777 96 aaKnown RBP3.03□□□□□ -1.92
PRPF39-210ENST00000556718 TGM6O95932 706 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 APOC1P02654 83 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 IFNW1P05000 195 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 IGHV4-34P06331 123 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms