RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 SLC10A1Q14973 349 aa4.56□□□□□ -1.68
TMEM260-210ENST00000556422 ZNF79Q15937 498 aa4.56□□□□□ -1.68
TMEM260-210ENST00000556422 ZNF791Q3KP31 576 aaPredicted RBP4.56□□□□□ -1.68
TMEM260-210ENST00000556422 PLK5Q496M5 336 aa4.56□□□□□ -1.68
TMEM260-210ENST00000556422 FNDC7Q5VTL7 733 aa4.56□□□□□ -1.68
TMEM260-210ENST00000556422 C22orf42Q6IC83 251 aa4.56□□□□□ -1.68
TMEM260-210ENST00000556422 ZNF705AQ6ZN79 300 aaPredicted RBP4.56□□□□□ -1.68
TMEM260-210ENST00000556422 WDFY1Q8IWB7 410 aa4.56□□□□□ -1.68
TMEM260-210ENST00000556422 LAX1Q8IWV1 398 aa4.56□□□□□ -1.68
TMEM260-210ENST00000556422 C1orf87Q8N0U7 546 aa4.56□□□□□ -1.68
TMEM260-210ENST00000556422 STPG2Q8N412 459 aa4.56□□□□□ -1.68
TMEM260-210ENST00000556422 BCORP1Q8N888 145 aa4.56□□□□□ -1.68
TMEM260-210ENST00000556422 ATP6V1C2Q8NEY4 427 aa4.56□□□□□ -1.68
TMEM260-210ENST00000556422 OR1L6Q8NGR2 347 aa4.56□□□□□ -1.68
TMEM260-210ENST00000556422 OR51A7Q8NH64 312 aa4.56□□□□□ -1.68
TMEM260-210ENST00000556422 PTPMT1Q8WUK0 201 aaPredicted RBP4.56□□□□□ -1.68
TMEM260-210ENST00000556422 DAZLQ92904 295 aaKnown RBP4.56□□□□□ -1.68
TMEM260-210ENST00000556422 SLC25A46Q96AG3 418 aa4.56□□□□□ -1.68
TMEM260-210ENST00000556422 MIB2Q96AX9 1013 aa4.56□□□□□ -1.68
TMEM260-210ENST00000556422 SENP5Q96HI0 755 aaPredicted RBP4.56□□□□□ -1.68
TMEM260-210ENST00000556422 TMEM56Q96MV1 263 aa4.56□□□□□ -1.68
TMEM260-210ENST00000556422 ERMAPQ96PL5 475 aaPredicted RBP4.56□□□□□ -1.68
TMEM260-210ENST00000556422 UBL7Q96S82 380 aaPredicted RBP4.56□□□□□ -1.68
TMEM260-210ENST00000556422 ISG20L2Q9H9L3 353 aaKnown RBP4.56□□□□□ -1.68
TMEM260-210ENST00000556422 AKIRIN1Q9H9L7 192 aaPredicted RBP4.56□□□□□ -1.68
TMEM260-210ENST00000556422 EMC7Q9NPA0 242 aa4.56□□□□□ -1.68
TMEM260-210ENST00000556422 CMC2Q9NRP2 79 aa4.56□□□□□ -1.68
TMEM260-210ENST00000556422 PLEKHB1Q9UF11 243 aaPredicted RBP4.56□□□□□ -1.68
TMEM260-210ENST00000556422 NPTNQ9Y639 398 aa4.56□□□□□ -1.68
TMEM260-210ENST00000556422 TMEM56-RWDD3S4R434 201 aa4.56□□□□□ -1.68
TMEM260-210ENST00000556422 ASPMQ8IZT6 3477 aa4.56□□□□□ -1.68
TMEM260-210ENST00000556422 IGHV1OR21-1A0A087WYE8 117 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 IGKV3D-11A0A0A0MRZ8 115 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 ZNF705GA8MUZ8 300 aaPredicted RBP4.55□□□□□ -1.68
TMEM260-210ENST00000556422 H0YIG0 161 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 K7ESF4 209 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 AIPO00170 330 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 AP4M1O00189 453 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 LCATP04180 440 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 ITGB2P05107 769 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 MYF5P13349 255 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 CEACAM1P13688 526 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 BMP7P18075 431 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 MST1P26927 711 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 TNFSF8P32971 234 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 AQP2P41181 271 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 ASCL1P50553 236 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 UCP2P55851 309 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 SLC37A1P57057 533 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 ERVFRD-1P60508 538 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 ALG10BQ5I7T1 473 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 PRR27Q6MZM9 219 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 UNQ6494/PRO21346Q6UXR6 183 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 FAM220AQ7Z4H9 259 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 WDR5BQ86VZ2 330 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 CBLN2Q8IUK8 224 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 GLB1L2Q8IW92 636 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 BAP18Q8IXM2 172 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 ZNF100Q8IYN0 542 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 SLC25A45Q8N413 288 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 UXS1Q8NBZ7 420 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 BEND2Q8NDZ0 799 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 OR6N1Q8NGY5 312 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 OR2V1Q8NHB1 315 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 ASB17Q8WXJ9 295 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 DGAT2Q96PD7 388 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 MMP25Q9NPA2 562 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 PEF1Q9UBV8 284 aaKnown RBP4.55□□□□□ -1.68
TMEM260-210ENST00000556422 TUBD1Q9UJT1 453 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 RASD1Q9Y272 281 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 MRPS33Q9Y291 106 aaKnown RBP4.55□□□□□ -1.68
TMEM260-210ENST00000556422 EXOSC1Q9Y3B2 195 aaKnown RBP4.55□□□□□ -1.68
TMEM260-210ENST00000556422 TNFRSF18Q9Y5U5 241 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 SIRT4Q9Y6E7 314 aaPredicted RBP4.55□□□□□ -1.68
TMEM260-210ENST00000556422 IQCMA0A1B0GVH7 501 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 TCRBV16S1A1N1A0A5B0 115 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 SMCO3A2RU48 225 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 M0QXV9 152 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 PF4P02776 101 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 UCHL1P09936 223 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 GTF2F2P13984 249 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 FGF7P21781 194 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 FGF9P31371 208 aaPredicted RBP4.55□□□□□ -1.68
TMEM260-210ENST00000556422 GABRA5P31644 462 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 HTR5AP47898 357 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 EPHA4P54764 986 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 OR1D5P58170 312 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 CKS1BP61024 79 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 FAM3AP98173 230 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 MXD1Q05195 221 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 SHBQ15464 509 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 CD226Q15762 336 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 ISXQ2M1V0 245 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 PAMR1Q6UXH9 720 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 APOOLQ6UXV4 268 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 BMP8AQ7Z5Y6 402 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 TMEM99Q8N816 258 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 OR52N4Q8NGI2 321 aa4.55□□□□□ -1.68
TMEM260-210ENST00000556422 OR51G2Q8NGK0 314 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms