RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 ADRA2AP08913 450 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 CD53P19397 219 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 ACHEP22303 614 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 ALDH3B1P43353 468 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 CDH15P55291 814 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 KRTAP10-9P60411 292 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 FAM3AP98173 230 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 ACSM1Q08AH1 577 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 RIPPLY1Q0D2K3 151 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 IRF3Q14653 427 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 CDK5R1Q15078 307 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 MED22Q15528 200 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 OR8B8Q15620 311 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 TBCEQ15813 527 aaPredicted RBP6.53□□□□□ -1.36
TDP1-214ENST00000556063 MSMPQ1L6U9 139 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 ZBTB37Q5TC79 503 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 C11orf71Q6IPW1 123 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 CDH24Q86UP0 819 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 LRP11Q86VZ4 500 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 OR5AS1Q8N127 324 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 SPERTQ8NA61 448 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 SEMA6DQ8NFY4 1073 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 OR56B2PQ8NGI1 322 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 OR5AK2Q8NH90 309 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 NEU4Q8WWR8 484 aaPredicted RBP6.53□□□□□ -1.36
TDP1-214ENST00000556063 THRSPQ92748 146 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 C10orf35Q96D05 121 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 HIST1H2AAQ96QV6 131 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 NR1H4Q96RI1 486 aaPredicted RBP6.53□□□□□ -1.36
TDP1-214ENST00000556063 CACNG6Q9BXT2 260 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 POFUT1Q9H488 388 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 NEK6Q9HC98 313 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 PAK1IP1Q9NWT1 392 aaPredicted RBP6.53□□□□□ -1.36
TDP1-214ENST00000556063 NKIRAS2Q9NYR9 191 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 MRPL15Q9P015 296 aaKnown RBP6.53□□□□□ -1.36
TDP1-214ENST00000556063 FRRS1LQ9P0K9 344 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 ZNF319Q9P2F9 582 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 HHLA2Q9UM44 414 aa6.53□□□□□ -1.36
TDP1-214ENST00000556063 CREBBPQ92793 2442 aa6.52□□□□□ -1.36
TDP1-214ENST00000556063 A0A087WXM4 84 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 ZNF816-ZNF321PA0A0X1KG74 233 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 LOC107986453A0A1B0GWG9 222 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 C5orf63A6NC05 138 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 C17orf100A8MU93 164 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 E9PI62 339 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 OVOL3O00110 214 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 OGG1O15527 345 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 SPRY3O43610 288 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 GMDSO60547 372 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 CST4P01036 141 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 IGLV3-1P01715 115 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 CD1AP06126 327 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 CD2P06729 351 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 ADH4P08319 380 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 HSMCR30P0CW71 290 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 NAT2P11245 290 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 TNFRSF1AP19438 455 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 CELP19835 753 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 CCL1P22362 96 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 KIR3DL2P43630 455 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 SRP9P49458 86 aaKnown RBP6.52□□□□□ -1.37
TDP1-214ENST00000556063 MMP15P51511 669 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 ATP5J2P56134 94 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 NANOS3P60323 173 aaKnown RBP6.52□□□□□ -1.37
TDP1-214ENST00000556063 GPR50Q13585 617 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 OR8G1Q15617 311 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 ODF4Q2M2E3 257 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 DEFB113Q30KQ7 82 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 ZNF773Q6PK81 442 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 ZNF367Q7RTV3 350 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 PRSS35Q8N3Z0 413 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 PLPP7Q8NBV4 271 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 ZNF485Q8NCK3 441 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 BHLHE23Q8NDY6 225 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 TSPAN14Q8NG11 270 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 OR2Z1Q8NG97 314 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 OR8S1Q8NH09 359 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 GPR148Q8TDV2 347 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 SGCDQ92629 289 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 NRGNQ92686 78 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 UFD1Q92890 307 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 PPP1R14AQ96A00 147 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 MBD6Q96DN6 1003 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 SMIM19Q96E16 107 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 ELMOD3Q96FG2 381 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 TECTBQ96PL2 329 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 MICU1Q9BPX6 476 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 SLC30A2Q9BRI3 323 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 PAPOLGQ9BWT3 736 aaKnown RBP6.52□□□□□ -1.37
TDP1-214ENST00000556063 LIME1Q9H400 295 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 MSL2Q9HCI7 577 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 MYOZ1Q9NP98 299 aaPredicted RBP6.52□□□□□ -1.37
TDP1-214ENST00000556063 ISYNA1Q9NPH2 558 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 DECR2Q9NUI1 292 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 ZNF701Q9NV72 531 aaPredicted RBP6.52□□□□□ -1.37
TDP1-214ENST00000556063 C14orf119Q9NWQ9 140 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 MYEF2Q9P2K5 600 aaKnown RBP6.52□□□□□ -1.37
TDP1-214ENST00000556063 ENPP5Q9UJA9 477 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 ZNF281Q9Y2X9 895 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 MPC1Q9Y5U8 109 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms