RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 MED18Q9BUE0 208 aa8.8□□□□□ -1
SRP54-208ENST00000555557 SLIRPQ9GZT3 109 aaKnown RBP8.8□□□□□ -1
SRP54-208ENST00000555557 PPP1R3EQ9H7J1 279 aa8.8□□□□□ -1
SRP54-208ENST00000555557 EIF3KQ9UBQ5 218 aaKnown RBP8.8□□□□□ -1
SRP54-208ENST00000555557 PIGLQ9Y2B2 252 aa8.8□□□□□ -1
SRP54-208ENST00000555557 ZNF462Q96JM2 2506 aa8.8□□□□□ -1
SRP54-208ENST00000555557 TRAV1-2A0A0B4J238 106 aa8.8□□□□□ -1
SRP54-208ENST00000555557 IGHV2OR16-5A0A0B4J2B6 119 aa8.8□□□□□ -1
SRP54-208ENST00000555557 hCG_38984A0A1B0GV85 526 aa8.8□□□□□ -1
SRP54-208ENST00000555557 XRCC2O43543 280 aa8.8□□□□□ -1
SRP54-208ENST00000555557 RAF1P04049 648 aa8.8□□□□□ -1
SRP54-208ENST00000555557 ZNF12P17014 697 aa8.8□□□□□ -1
SRP54-208ENST00000555557 ZNF20P17024 532 aa8.8□□□□□ -1
SRP54-208ENST00000555557 ADRA2CP18825 462 aa8.8□□□□□ -1
SRP54-208ENST00000555557 GSK3AP49840 483 aa8.8□□□□□ -1
SRP54-208ENST00000555557 NAAAQ02083 359 aa8.8□□□□□ -1
SRP54-208ENST00000555557 SPOCK1Q08629 439 aa8.8□□□□□ -1
SRP54-208ENST00000555557 FBXL19-AS1Q494R0 122 aa8.8□□□□□ -1
SRP54-208ENST00000555557 SERPINA12Q8IW75 414 aa8.8□□□□□ -1
SRP54-208ENST00000555557 PARP16Q8N5Y8 322 aa8.8□□□□□ -1
SRP54-208ENST00000555557 FAM169BQ8N8A8 192 aa8.8□□□□□ -1
SRP54-208ENST00000555557 SPSB4Q96A44 273 aa8.8□□□□□ -1
SRP54-208ENST00000555557 REPIN1Q9BWE0 567 aaKnown RBP8.8□□□□□ -1
SRP54-208ENST00000555557 OR2J1Q9GZK6 312 aa8.8□□□□□ -1
SRP54-208ENST00000555557 PLEKHA1Q9HB21 404 aa8.8□□□□□ -1
SRP54-208ENST00000555557 V9GYS6 101 aa8.8□□□□□ -1
SRP54-208ENST00000555557 CADP27708 2225 aa8.79□□□□□ -1
SRP54-208ENST00000555557 A0A0G2JK05 382 aa8.79□□□□□ -1
SRP54-208ENST00000555557 MTRF1O75570 445 aaKnown RBP8.79□□□□□ -1
SRP54-208ENST00000555557 IGFBP3P17936 291 aaPredicted RBP8.79□□□□□ -1
SRP54-208ENST00000555557 RAB3BP20337 219 aa8.79□□□□□ -1
SRP54-208ENST00000555557 RORCP51449 518 aa8.79□□□□□ -1
SRP54-208ENST00000555557 PPP1CBP62140 327 aa8.79□□□□□ -1
SRP54-208ENST00000555557 MALLQ13021 153 aa8.79□□□□□ -1
SRP54-208ENST00000555557 DGUOKQ16854 277 aa8.79□□□□□ -1
SRP54-208ENST00000555557 MTFR2Q6P444 385 aa8.79□□□□□ -1
SRP54-208ENST00000555557 PGAP1Q75T13 922 aa8.79□□□□□ -1
SRP54-208ENST00000555557 LRRTM1Q86UE6 522 aa8.79□□□□□ -1
SRP54-208ENST00000555557 SEMA6DQ8NFY4 1073 aa8.79□□□□□ -1
SRP54-208ENST00000555557 OR1J1Q8NGS3 322 aa8.79□□□□□ -1
SRP54-208ENST00000555557 OR13C9Q8NGT0 318 aa8.79□□□□□ -1
SRP54-208ENST00000555557 ITLN2Q8WWU7 325 aaPredicted RBP8.79□□□□□ -1
SRP54-208ENST00000555557 AKAP1Q92667 903 aaKnown RBP eCLIP8.79□□□□□ -1
SRP54-208ENST00000555557 RGCCQ9H4X1 137 aa8.79□□□□□ -1
SRP54-208ENST00000555557 CRIM1Q9NZV1 1036 aa8.79□□□□□ -1
SRP54-208ENST00000555557 SLC2A2P11168 524 aaPredicted RBP8.78□□□□□ -1
SRP54-208ENST00000555557 CD40P25942 277 aa8.78□□□□□ -1
SRP54-208ENST00000555557 TFF3Q07654 80 aa8.78□□□□□ -1
SRP54-208ENST00000555557 RIPPLY1Q0D2K3 151 aa8.78□□□□□ -1
SRP54-208ENST00000555557 Q6ZSR3 168 aa8.78□□□□□ -1
SRP54-208ENST00000555557 MRPL21Q7Z2W9 205 aaKnown RBP8.78□□□□□ -1
SRP54-208ENST00000555557 RNF144BQ7Z419 303 aa8.78□□□□□ -1
SRP54-208ENST00000555557 TPRA1Q86W33 373 aa8.78□□□□□ -1
SRP54-208ENST00000555557 BHLHE23Q8NDY6 225 aa8.78□□□□□ -1
SRP54-208ENST00000555557 OR56B2PQ8NGI1 322 aa8.78□□□□□ -1
SRP54-208ENST00000555557 OR5L1Q8NGL2 311 aa8.78□□□□□ -1
SRP54-208ENST00000555557 OR5D14Q8NGL3 314 aa8.78□□□□□ -1
SRP54-208ENST00000555557 SLC25A40Q8TBP6 338 aa8.78□□□□□ -1
SRP54-208ENST00000555557 BORCS5Q969J3 196 aa8.78□□□□□ -1
SRP54-208ENST00000555557 RADILQ96JH8 1075 aa8.78□□□□□ -1
SRP54-208ENST00000555557 USB1Q9BQ65 265 aaKnown RBP8.78□□□□□ -1
SRP54-208ENST00000555557 HELZ2Q9BYK8 2649 aaKnown RBP8.78□□□□□ -1
SRP54-208ENST00000555557 SLITRK2Q9H156 845 aa8.78□□□□□ -1
SRP54-208ENST00000555557 OR10A4Q9H209 315 aa8.78□□□□□ -1
SRP54-208ENST00000555557 CKLFQ9UBR5 152 aa8.78□□□□□ -1
SRP54-208ENST00000555557 PLEKHB1Q9UF11 243 aaPredicted RBP8.78□□□□□ -1
SRP54-208ENST00000555557 DAPK2Q9UIK4 370 aa8.78□□□□□ -1
SRP54-208ENST00000555557 FZR1Q9UM11 496 aa8.78□□□□□ -1
SRP54-208ENST00000555557 FOXJ3Q9UPW0 622 aa8.78□□□□□ -1
SRP54-208ENST00000555557 A0A0B4J203 849 aa8.78□□□□□ -1
SRP54-208ENST00000555557 LOC390937A0A1W2PQ73 354 aa8.78□□□□□ -1
SRP54-208ENST00000555557 DPRXA6NFQ7 191 aa8.78□□□□□ -1
SRP54-208ENST00000555557 GGT3PA6NGU5 568 aa8.78□□□□□ -1
SRP54-208ENST00000555557 ATP6V1G2-DDX39BF2Z307 99 aa8.78□□□□□ -1
SRP54-208ENST00000555557 ICMTO60725 284 aa8.78□□□□□ -1
SRP54-208ENST00000555557 LILRA1O75019 489 aa8.78□□□□□ -1
SRP54-208ENST00000555557 CRYAAP02489 173 aa8.78□□□□□ -1
SRP54-208ENST00000555557 SOX6P35712 828 aa8.78□□□□□ -1
SRP54-208ENST00000555557 DDOSTP39656 456 aa8.78□□□□□ -1
SRP54-208ENST00000555557 MAP2K3P46734 347 aa8.78□□□□□ -1
SRP54-208ENST00000555557 OR8B8Q15620 311 aa8.78□□□□□ -1
SRP54-208ENST00000555557 UBE2V2Q15819 145 aa8.78□□□□□ -1
SRP54-208ENST00000555557 IDNKQ5T6J7 187 aa8.78□□□□□ -1
SRP54-208ENST00000555557 HES5Q5TA89 166 aa8.78□□□□□ -1
SRP54-208ENST00000555557 OR2T2Q6IF00 324 aa8.78□□□□□ -1
SRP54-208ENST00000555557 SFXN4Q6P4A7 337 aa8.78□□□□□ -1
SRP54-208ENST00000555557 MCFD2Q8NI22 146 aa8.78□□□□□ -1
SRP54-208ENST00000555557 NPRL2Q8WTW4 380 aa8.78□□□□□ -1
SRP54-208ENST00000555557 THRSPQ92748 146 aa8.78□□□□□ -1
SRP54-208ENST00000555557 CMBLQ96DG6 245 aa8.78□□□□□ -1
SRP54-208ENST00000555557 SPACA5Q96QH8 159 aa8.78□□□□□ -1
SRP54-208ENST00000555557 C6orf62Q9GZU0 229 aaPredicted RBP8.78□□□□□ -1
SRP54-208ENST00000555557 ZCCHC4Q9H5U6 513 aa8.78□□□□□ -1
SRP54-208ENST00000555557 GPR173Q9NS66 373 aa8.78□□□□□ -1
SRP54-208ENST00000555557 CCDC59Q9P031 241 aaKnown RBP8.78□□□□□ -1
SRP54-208ENST00000555557 ZNF391Q9UJN7 358 aa8.78□□□□□ -1
SRP54-208ENST00000555557 RHBDD3Q9Y3P4 386 aa8.78□□□□□ -1
SRP54-208ENST00000555557 V9GY05 133 aa8.78□□□□□ -1
SRP54-208ENST00000555557 IGKV1-9A0A0C4DH69 117 aa8.77□□□□□ -1.01
SRP54-208ENST00000555557 ANXA2P2A6NMY6 339 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms