RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	FNDC5	Q8NAU1	212 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	TMEM185A	Q8NFB2	350 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	MIPOL1	Q8TD10	442 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	SFXN5	Q8TD22	340 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	TMEM158	Q8WZ71	300 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	ST8SIA1	Q92185	356 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	APH1A	Q96BI3	265 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	MUCL1	Q96DR8	90 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	TEX37	Q96LM6	180 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	PPP1R36	Q96LQ0	422 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	LINC00479	Q96M42	142 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	FOXN4	Q96NZ1	517 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	C19orf24	Q9BVV8	132 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	OR51I1	Q9H343	314 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	GPN1	Q9HCN4	374 aa	Predicted RBP	4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	FANCF	Q9NPI8	374 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	SLC35D1	Q9NTN3	355 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	CHRNA9	Q9UGM1	479 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	NOSIP	Q9Y314	301 aa	Known RBP	4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	TMED5	Q9Y3A6	229 aa		4.24	□□□□□ -1.73
PSMC6-208	ENST00000554956	CHD3	Q12873	2000 aa	Known RBP	4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	TRAV18	A0A075B6X5	111 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956		A0A087X0K7	114 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	IGHV1-18	A0A0C4DH31	117 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	CIB4	A0PJX0	185 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	NDUFAF8	A1L188	74 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	LRP5L	A4QPB2	252 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	TMEM114	B3SHH9	223 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	SLCO1B7	G3V0H7	640 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	HMGN4	O00479	90 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	STX11	O75558	287 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	DUS4L	O95620	317 aa	Known RBP	4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	PRG2	P13727	222 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	PGC	P20142	388 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	USF1	P22415	310 aa	Predicted RBP	4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	IL12A	P29459	219 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	IL2RG	P31785	369 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	CDKN2C	P42773	168 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	IDH2	P48735	452 aa	Known RBP	4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	EFNA4	P52798	201 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	CLDN8	P56748	225 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	OR2B6	P58173	313 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	EMX2	Q04743	252 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	SLC34A1	Q06495	639 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	PPP1R8	Q12972	351 aa	Known RBP	4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	BNIP2	Q12982	314 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	SLC17A1	Q14916	467 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	OPCML	Q14982	345 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	RAB35	Q15286	201 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	SYPL1	Q16563	259 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	NRF1	Q16656	503 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	HIKESHI	Q53FT3	197 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	SAXO2	Q658L1	398 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	CYB5R2	Q6BCY4	276 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	CLEC2A	Q6UVW9	174 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	SIGLEC15	Q6ZMC9	328 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	EIF3M	Q7L2H7	374 aa	Known RBP	4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	P2RY8	Q86VZ1	359 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	ZCCHC24	Q8N2G6	241 aa	Known RBP	4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	TMEM99	Q8N816	258 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	OR13C3	Q8NGS6	347 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	TCP10L	Q8TDR4	215 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	DYRK2	Q92630	601 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	ANP32B	Q92688	251 aa	Known RBP	4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	TUBGCP3	Q96CW5	907 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	PKNOX2	Q96KN3	472 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	C4orf45	Q96LM5	186 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	PPP3R2	Q96LZ3	170 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	BEX2	Q9BXY8	128 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	IQCG	Q9H095	443 aa	Known RBP	4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	SHARPIN	Q9H0F6	387 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	SLC38A1	Q9H2H9	487 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	EML4	Q9HC35	981 aa	Known RBP	4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	SLC17A5	Q9NRA2	495 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	TAS2R16	Q9NYV7	291 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	MOK	Q9UQ07	419 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	FOXA2	Q9Y261	457 aa	Predicted RBP	4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	EXOG	Q9Y2C4	368 aa	Known RBP	4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	FLVCR1	Q9Y5Y0	555 aa		4.23	□□□□□ -1.73
PSMC6-208	ENST00000554956	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	4.23	□□□□□ -1.73	4e-6	■■■□□ 15.7
PSMC6-208	ENST00000554956	TMED7-TICAM2	A0A0A6YYA0	188 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	TRBV5-5	A0A0J9YX44	114 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	TMEM129	A0AVI4	362 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	MSGN1	A6NI15	193 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	LYNX1	G3V0Z9	82 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	TYROBP	O43914	113 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	MRPL33	O75394	65 aa	Known RBP	4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	UPK3A	O75631	287 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	CDK2AP2	O75956	126 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	CPSF4	O95639	269 aa	Known RBP	4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	DIRAS3	O95661	229 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	LGI1	O95970	557 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	BPGM	P07738	259 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	KRT16	P08779	473 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	GKN3P	P0CG01	181 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	LYNX1	P0DP58	116 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	SLC25A16	P16260	332 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	CALCR	P30988	508 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	CNN1	P51911	297 aa	Known RBP	4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	GGTLC2	Q14390	218 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms