RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 MTIF3Q9H2K0 278 aaKnown RBP3□□□□□ -1.93
SEC23A-207ENST00000554615 EXO5Q9H790 373 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 TBC1D17Q9HA65 648 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 SERINC1Q9NRX5 453 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 UQCC1Q9NVA1 299 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 LPAR3Q9UBY5 353 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 TEKT2Q9UIF3 430 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 PILRBQ9UKJ0 227 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 NXT1Q9UKK6 140 aaKnown RBP3□□□□□ -1.93
SEC23A-207ENST00000554615 FLVCR2Q9UPI3 526 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 RPH3AQ9Y2J0 694 aaPredicted RBP3□□□□□ -1.93
SEC23A-207ENST00000554615 CLCA3PQ9Y6N3 262 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 LOC107986453A0A1B0GWG9 222 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 MEX3AA1L020 520 aaKnown RBP3□□□□□ -1.93
SEC23A-207ENST00000554615 TVP23AA6NH52 213 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 ZNF814B7Z6K7 855 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 ARPC1BO15143 372 aaKnown RBP3□□□□□ -1.93
SEC23A-207ENST00000554615 ALOX12BO75342 701 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 FBXO24O75426 580 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 IGHEP01854 428 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 ERCC1P07992 297 aaPredicted RBP3□□□□□ -1.93
SEC23A-207ENST00000554615 LIFP15018 202 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 BDKRB2P30411 391 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 CCR4P51679 360 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 CLDN15P56746 228 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 ERVK-25P63136 954 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 FOXO1Q12778 655 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 OR8G1Q15617 311 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 HMGN3Q15651 99 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 GPR68Q15743 365 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 CLEC12AQ5QGZ9 265 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 PLA2G2CQ5R387 149 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 PHYHD1Q5SRE7 291 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 RPUSD3Q6P087 351 aaKnown RBP3□□□□□ -1.93
SEC23A-207ENST00000554615 SPSB3Q6PJ21 355 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 DNM1P34Q6PK57 102 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 ARL9Q6T311 187 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 LINC00346Q8IVM7 164 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 FAM71E2Q8N5Q1 922 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 BEST4Q8NFU0 473 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 OR10H4Q8NGA5 316 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 KCNE4Q8WWG9 221 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 MBD3L1Q8WWY6 194 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 TMEM203Q969S6 136 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 HSPA12BQ96MM6 686 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 USB1Q9BQ65 265 aaKnown RBP3□□□□□ -1.93
SEC23A-207ENST00000554615 KXD1Q9BQD3 176 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 DDA1Q9BW61 102 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 PECRQ9BY49 303 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 OPA3Q9H6K4 179 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 TMEM165Q9HC07 324 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 TCF7L1Q9HCS4 588 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 MBNL3Q9NUK0 354 aaKnown RBP3□□□□□ -1.93
SEC23A-207ENST00000554615 LUZP4Q9P127 313 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 MSRAQ9UJ68 235 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 HHLA2Q9UM44 414 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 TIMM9Q9Y5J7 89 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 ARL2-SNX15V9GYD0 113 aa3□□□□□ -1.93
SEC23A-207ENST00000554615 CXorf65A6NEN9 183 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 C17orf105B2RV13 164 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 FNDC10F2Z333 226 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 CH25HO95992 272 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 MBPP02686 304 aaPredicted RBP2.99□□□□□ -1.93
SEC23A-207ENST00000554615 RLN2P04090 185 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 CD3DP04234 171 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 ESDP10768 282 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 ANXA7P20073 488 aaKnown RBP2.99□□□□□ -1.93
SEC23A-207ENST00000554615 RAB3AP20336 220 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 IL11P20809 199 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 GRPRP30550 384 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 PRSS3P35030 304 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 RFC3P40938 356 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 RAB5CP51148 216 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 MTCP1P56278 107 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 ERVFRD-1P60508 538 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 CTXN1P60606 82 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 CYCSP99999 105 aaKnown RBP2.99□□□□□ -1.93
SEC23A-207ENST00000554615 IL13RA2Q14627 380 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 RAB35Q15286 201 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 ANKRD55Q3KP44 614 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 C1QL3Q5VWW1 255 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 ENPP7Q6UWV6 458 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 MRPL52Q86TS9 123 aaKnown RBP2.99□□□□□ -1.93
SEC23A-207ENST00000554615 MEX3DQ86XN8 651 aaKnown RBP2.99□□□□□ -1.93
SEC23A-207ENST00000554615 C12orf45Q8N5I9 185 aaPredicted RBP2.99□□□□□ -1.93
SEC23A-207ENST00000554615 C15orf54Q8N8G6 183 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 OR8B12Q8NGG6 310 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 OR4K13Q8NH42 304 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 TERB2Q8NHR7 220 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 ARPC5LQ9BPX5 153 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 SLC6A17Q9H1V8 727 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 TAS2R4Q9NYW5 299 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 AKAP9Q99996 3911 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 OR5H14A6NHG9 310 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 OVOL3O00110 214 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 EIF1AYO14602 144 aaKnown RBP2.99□□□□□ -1.93
SEC23A-207ENST00000554615 CPNE3O75131 537 aaKnown RBP2.99□□□□□ -1.93
SEC23A-207ENST00000554615 RP2O75695 350 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 RBBP9O75884 186 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 DHRS3O75911 302 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms