RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, human

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R3A-204	ENST00000554574	ZNF346	Q9UL40	294 aa	Known RBP	4.13	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	FKBP7	Q9Y680	259 aa		4.13	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	MYO7B	Q6PIF6	2116 aa		4.13	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	PRRC2C	Q9Y520	2896 aa	Known RBP	4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	CENPBD1	B2RD01	187 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574		E9PI62	339 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	LRRTM2	O43300	516 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	SULT1C4	O75897	302 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	CDRT1	O95170	752 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	SNX4	O95219	450 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	CCL3	P10147	92 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	PRF1	P14222	555 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	LIF	P15018	202 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	CFL1	P23528	166 aa	Known RBP	4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	AZGP1	P25311	298 aa	Known RBP	4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	LMO1	P25800	156 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	ACVR1B	P36896	505 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	TGM4	P49221	684 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	DAP3	P51398	398 aa	Known RBP	4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	GBX2	P52951	348 aa	Predicted RBP	4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	HCCS	P53701	268 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	DSCR4	P56555	118 aa	Predicted RBP	4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	CLDN6	P56747	220 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574		Q0VFX4	171 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	MRPL28	Q13084	256 aa	Known RBP	4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	MYBPH	Q13203	477 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	CDK5R1	Q15078	307 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	OR7A5	Q15622	319 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	TRIP6	Q15654	476 aa	Known RBP	4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	ZNF239	Q16600	458 aa	Known RBP	4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	MS4A18	Q3C1V0	323 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	GLYR1	Q49A26	553 aa	Predicted RBP	4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	SPANXN2	Q5MJ10	180 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	ZNF684	Q5T5D7	378 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	PRAMEF20	Q5VT98	475 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	RPL22L1	Q6P5R6	122 aa	Known RBP	4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	PLEKHG7	Q6ZR37	379 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	CDC20B	Q86Y33	519 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	PM20D2	Q8IYS1	436 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	SYT14	Q8NB59	555 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	OR2AJ1	Q8NGZ0	328 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	RPS4Y2	Q8TD47	263 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	SMAP2	Q8WU79	429 aa	Predicted RBP	4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	AP3S1	Q92572	193 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	SLC25A28	Q96A46	364 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	SPSB1	Q96BD6	273 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	SMIM19	Q96E16	107 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	DNAJA3	Q96EY1	480 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	TPK1	Q9H3S4	243 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	RERGL	Q9H628	205 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	WDR76	Q9H967	626 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	PROK2	Q9HC23	129 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	COPS3	Q9UNS2	423 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	TRAPPC4	Q9Y296	219 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	RPH3A	Q9Y2J0	694 aa	Predicted RBP	4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	HDGFL3	Q9Y3E1	203 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	TMEM14A	Q9Y6G1	99 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	RTTN	Q86VV8	2226 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	ARHGAP21	Q5T5U3	1957 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	FREM1	Q5H8C1	2179 aa		4.12	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	IGLV1-36	A0A0B4J1U3	117 aa		4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	LOC102725191	A0A1B0GVB3	256 aa		4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574		A0A1B0GVG6	124 aa		4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	hDV102S1	A0JD36	115 aa		4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	NPIPA5	E9PKD4	350 aa		4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574		H7C1C5	153 aa		4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	PRRG2	O14669	202 aa		4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	PHYH	O14832	338 aa		4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	CASK	O14936	926 aa		4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	SSX4	O60224	188 aa		4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	GPRIN2	O60269	458 aa		4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	CBR3	O75828	277 aa		4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	PLG	P00747	810 aa	Predicted RBP	4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	SERPINA3	P01011	423 aa		4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	FSHB	P01225	129 aa		4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	TACSTD2	P09758	323 aa		4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	DANCR	P0C864	163 aa		4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	HLA-DOB	P13765	273 aa		4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	ZNF17	P17021	662 aa		4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	ALOX5AP	P20292	161 aa		4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	DPP4	P27487	766 aa		4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	CRABP1	P29762	137 aa		4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	DLST	P36957	453 aa		4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	CD81	P60033	236 aa		4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	LCN6	P62502	163 aa		4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	GLO1	Q04760	184 aa		4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	MXD1	Q05195	221 aa		4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	HNRNPA0	Q13151	305 aa	Known RBP	4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	RGS21	Q2M5E4	152 aa		4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	TP53I3	Q53FA7	332 aa		4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	ACER2	Q5QJU3	275 aa		4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	TIGD3	Q6B0B8	471 aa		4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	WDR73	Q6P4I2	378 aa		4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	ARL9	Q6T311	187 aa		4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	PAMR1	Q6UXH9	720 aa		4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	NHLRC1	Q6VVB1	395 aa		4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	SLC35D2	Q76EJ3	337 aa		4.11	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	TPRA1	Q86W33	373 aa		4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 273.3 ms