RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 SOAT1P35610 550 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 DLSTP36957 453 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 CSRP3P50461 194 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 RAB7AP51149 207 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 PNLIPRP2P54317 469 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 GEMP55040 296 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 CKS1BP61024 79 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 TBPL1P62380 186 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 RANP62826 216 aaKnown RBP3.89□□□□□ -1.79
ATXN3-227ENST00000554491 RPS27AP62979 156 aaKnown RBP3.89□□□□□ -1.79
ATXN3-227ENST00000554491 RAB32Q13637 225 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 CEACAM7Q14002 265 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 DAG1Q14118 895 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 HMGN3Q15651 99 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 MAPK14Q16539 360 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 POU2AF1Q16633 256 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 ZNF658BQ4V348 819 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-227ENST00000554491 CARD16Q5EG05 197 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 GCSAMLQ5JQS6 135 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 SAMD4BQ5PRF9 694 aaKnown RBP3.89□□□□□ -1.79
ATXN3-227ENST00000554491 C1orf194Q5T5A4 169 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 IDNKQ5T6J7 187 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 LGSNQ5TDP6 509 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 CST9LP1Q5W188 147 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 SAXO2Q658L1 398 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 PRR27Q6MZM9 219 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 TMEM205Q6UW68 189 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 MOB3CQ70IA8 216 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 MON1BQ7L1V2 547 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 PTAR1Q7Z6K3 402 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-227ENST00000554491 SLC47A2Q86VL8 602 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 LAX1Q8IWV1 398 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 LGI3Q8N145 548 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 GTPBP8Q8N3Z3 284 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-227ENST00000554491 JAGN1Q8N5M9 183 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 HORMAD2Q8N7B1 307 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 SLC38A9Q8NBW4 561 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 OR2AK2Q8NG84 335 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 OR4C5Q8NGB2 326 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 OR10G3Q8NGC4 313 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 OR10AD1Q8NGE0 317 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 OR56A4Q8NGH8 313 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 OR1L6Q8NGR2 347 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 OR10X1Q8NGY0 326 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 SPATA3Q8NHX4 192 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 TMEM163Q8TC26 289 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 UBTD2Q8WUN7 234 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 TMEM171Q8WVE6 324 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 ELSPBP1Q96BH3 223 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 MARK4Q96L34 752 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 TEX37Q96LM6 180 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 TECTBQ96PL2 329 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 OR5B12Q96R08 314 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 OR7D2Q96RA2 312 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 F2RL3Q96RI0 385 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 ASCL2Q99929 193 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 CBWD1Q9BRT8 395 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 WDR83Q9BRX9 315 aaKnown RBP3.89□□□□□ -1.79
ATXN3-227ENST00000554491 MAGT1Q9H0U3 335 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 UBQLN3Q9H347 655 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 PLEKHA2Q9HB19 425 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 NOX3Q9HBY0 568 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 TRIM36Q9NQ86 728 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 FGF21Q9NSA1 209 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 MARCH5Q9NX47 278 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 IL17CQ9P0M4 197 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 WRAP73Q9P2S5 460 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-227ENST00000554491 COMMD3Q9UBI1 195 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 FBXW11Q9UKB1 542 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 A4GNTQ9UNA3 340 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 FLVCR2Q9UPI3 526 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 EXOSC1Q9Y3B2 195 aaKnown RBP3.89□□□□□ -1.79
ATXN3-227ENST00000554491 SPIN1Q9Y657 262 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-227ENST00000554491 MYH10P35580 1976 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 CHD5Q8TDI0 1954 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 COL1A2P08123 1366 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 ATMQ13315 3056 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 COL12A1Q99715 3063 aa3.89□□□□□ -1.79
ATXN3-227ENST00000554491 SPTBN1Q01082 2364 aaKnown RBP3.88□□□□□ -1.79
ATXN3-227ENST00000554491 TRAV8-7A0A075B6U6 113 aa3.88□□□□□ -1.79
ATXN3-227ENST00000554491 hCG_38984A0A1B0GV85 526 aa3.88□□□□□ -1.79
ATXN3-227ENST00000554491 NKX2-6A6NCS4 301 aa3.88□□□□□ -1.79
ATXN3-227ENST00000554491 FAM90A10PA6NDY2 464 aa3.88□□□□□ -1.79
ATXN3-227ENST00000554491 A6NNC1 897 aa3.88□□□□□ -1.79
ATXN3-227ENST00000554491 ZNF726A6NNF4 738 aa3.88□□□□□ -1.79
ATXN3-227ENST00000554491 HMSDA8MTL9 139 aa3.88□□□□□ -1.79
ATXN3-227ENST00000554491 A8MVM7 634 aa3.88□□□□□ -1.79
ATXN3-227ENST00000554491 HEPACAM2A8MVW5 462 aa3.88□□□□□ -1.79
ATXN3-227ENST00000554491 G3V3Y1 287 aa3.88□□□□□ -1.79
ATXN3-227ENST00000554491 HNRNPDLO14979 420 aaKnown RBP3.88□□□□□ -1.79
ATXN3-227ENST00000554491 SLC16A5O15375 505 aa3.88□□□□□ -1.79
ATXN3-227ENST00000554491 MAGEB4O15481 346 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-227ENST00000554491 PLA2G10O15496 165 aa3.88□□□□□ -1.79
ATXN3-227ENST00000554491 B4GALT5O43286 388 aa3.88□□□□□ -1.79
ATXN3-227ENST00000554491 MFSD11O43934 449 aa3.88□□□□□ -1.79
ATXN3-227ENST00000554491 SH3BGRLO75368 114 aa3.88□□□□□ -1.79
ATXN3-227ENST00000554491 OR6A2O95222 327 aa3.88□□□□□ -1.79
ATXN3-227ENST00000554491 TNFRSF6BO95407 300 aa3.88□□□□□ -1.79
ATXN3-227ENST00000554491 SERPIND1P05546 499 aa3.88□□□□□ -1.79
ATXN3-227ENST00000554491 BCHEP06276 602 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms