RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 ZNF593O00488 134 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-211ENST00000554310 WNT9BO14905 357 aa11.06□□□□□ -0.64
SHMT2-211ENST00000554310 SLC22A1O15245 554 aa11.06□□□□□ -0.64
SHMT2-211ENST00000554310 PRODHO43272 600 aa11.06□□□□□ -0.64
SHMT2-211ENST00000554310 ENTPD6O75354 484 aa11.06□□□□□ -0.64
SHMT2-211ENST00000554310 GLCEO94923 617 aa11.06□□□□□ -0.64
SHMT2-211ENST00000554310 IFNA2P01563 188 aa11.06□□□□□ -0.64
SHMT2-211ENST00000554310 PRR23D2P0DMB1 279 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-211ENST00000554310 PSKH1P11801 424 aa11.06□□□□□ -0.64
SHMT2-211ENST00000554310 PSMB9P28065 219 aa11.06□□□□□ -0.64
SHMT2-211ENST00000554310 SLC6A9P48067 706 aa11.06□□□□□ -0.64
SHMT2-211ENST00000554310 ST3GAL4Q11206 333 aa11.06□□□□□ -0.64
SHMT2-211ENST00000554310 GK2Q14410 553 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-211ENST00000554310 CTF1Q16619 201 aa11.06□□□□□ -0.64
SHMT2-211ENST00000554310 RNLSQ5VYX0 342 aa11.06□□□□□ -0.64
SHMT2-211ENST00000554310 OR2T2Q6IF00 324 aa11.06□□□□□ -0.64
SHMT2-211ENST00000554310 ACSM5Q6NUN0 579 aa11.06□□□□□ -0.64
SHMT2-211ENST00000554310 OR5AS1Q8N127 324 aa11.06□□□□□ -0.64
SHMT2-211ENST00000554310 TCEANCQ8N8B7 351 aa11.06□□□□□ -0.64
SHMT2-211ENST00000554310 OR8G5Q8NG78 346 aa11.06□□□□□ -0.64
SHMT2-211ENST00000554310 OR6N2Q8NGY6 317 aa11.06□□□□□ -0.64
SHMT2-211ENST00000554310 ST7LQ8TDW4 575 aa11.06□□□□□ -0.64
SHMT2-211ENST00000554310 CCL17Q92583 94 aa11.06□□□□□ -0.64
SHMT2-211ENST00000554310 OTULINQ96BN8 352 aa11.06□□□□□ -0.64
SHMT2-211ENST00000554310 RAB39BQ96DA2 213 aa11.06□□□□□ -0.64
SHMT2-211ENST00000554310 PLEKHA8Q96JA3 519 aa11.06□□□□□ -0.64
SHMT2-211ENST00000554310 ZNF582Q96NG8 517 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-211ENST00000554310 IL4I1Q96RQ9 567 aa11.06□□□□□ -0.64
SHMT2-211ENST00000554310 DCUN1D5Q9BTE7 237 aa11.06□□□□□ -0.64
SHMT2-211ENST00000554310 MARCH7Q9H992 704 aa11.06□□□□□ -0.64
SHMT2-211ENST00000554310 AMBNQ9NP70 447 aa11.06□□□□□ -0.64
SHMT2-211ENST00000554310 IL19Q9UHD0 177 aa11.06□□□□□ -0.64
SHMT2-211ENST00000554310 IFNL4K9M1U5 179 aa11.05□□□□□ -0.64
SHMT2-211ENST00000554310 C21orf33P30042 268 aaPredicted RBP11.05□□□□□ -0.64
SHMT2-211ENST00000554310 TGFBR2P37173 567 aa11.05□□□□□ -0.64
SHMT2-211ENST00000554310 DVL1P1P54792 670 aaPredicted RBP11.05□□□□□ -0.64
SHMT2-211ENST00000554310 LMO4P61968 165 aa11.05□□□□□ -0.64
SHMT2-211ENST00000554310 GRB2P62993 217 aaKnown RBP11.05□□□□□ -0.64
SHMT2-211ENST00000554310 TAF13Q15543 124 aa11.05□□□□□ -0.64
SHMT2-211ENST00000554310 SPRNQ5BIV9 151 aa11.05□□□□□ -0.64
SHMT2-211ENST00000554310 FAM120AOSQ5T036 256 aa11.05□□□□□ -0.64
SHMT2-211ENST00000554310 AVPI1Q5T686 147 aa11.05□□□□□ -0.64
SHMT2-211ENST00000554310 PLBD1Q6P4A8 553 aa11.05□□□□□ -0.64
SHMT2-211ENST00000554310 ZNF367Q7RTV3 350 aa11.05□□□□□ -0.64
SHMT2-211ENST00000554310 MRPL21Q7Z2W9 205 aaKnown RBP11.05□□□□□ -0.64
SHMT2-211ENST00000554310 PEG10Q86TG7 708 aaKnown RBP11.05□□□□□ -0.64
SHMT2-211ENST00000554310 GLCCI1Q86VQ1 547 aa11.05□□□□□ -0.64
SHMT2-211ENST00000554310 ZNF283Q8N7M2 679 aa11.05□□□□□ -0.64
SHMT2-211ENST00000554310 OR13G1Q8NGZ3 307 aa11.05□□□□□ -0.64
SHMT2-211ENST00000554310 OR51F2Q8NH61 342 aa11.05□□□□□ -0.64
SHMT2-211ENST00000554310 KCNJ15Q99712 375 aa11.05□□□□□ -0.64
SHMT2-211ENST00000554310 SLC30A2Q9BRI3 323 aa11.05□□□□□ -0.64
SHMT2-211ENST00000554310 OPA3Q9H6K4 179 aa11.05□□□□□ -0.64
SHMT2-211ENST00000554310 ZNF665Q9H7R5 613 aa11.05□□□□□ -0.64
SHMT2-211ENST00000554310 MED20Q9H944 212 aa11.05□□□□□ -0.64
SHMT2-211ENST00000554310 TMEM106BQ9NUM4 274 aa11.05□□□□□ -0.64
SHMT2-211ENST00000554310 TVP23BQ9NYZ1 205 aa11.05□□□□□ -0.64
SHMT2-211ENST00000554310 TREM2Q9NZC2 230 aa11.05□□□□□ -0.64
SHMT2-211ENST00000554310 A0A1B0GWJ7 208 aa11.04□□□□□ -0.64
SHMT2-211ENST00000554310 IRGMA1A4Y4 181 aa11.04□□□□□ -0.64
SHMT2-211ENST00000554310 FAM157AC9JC47 383 aa11.04□□□□□ -0.64
SHMT2-211ENST00000554310 PRKYO43930 277 aa11.04□□□□□ -0.64
SHMT2-211ENST00000554310 APOC1P02654 83 aa11.04□□□□□ -0.64
SHMT2-211ENST00000554310 MSMBP08118 114 aa11.04□□□□□ -0.64
SHMT2-211ENST00000554310 DBTP11182 482 aaKnown RBP11.04□□□□□ -0.64
SHMT2-211ENST00000554310 SRP9P49458 86 aaKnown RBP11.04□□□□□ -0.64
SHMT2-211ENST00000554310 MMP16P51512 607 aa11.04□□□□□ -0.64
SHMT2-211ENST00000554310 ZNF91Q05481 1191 aa11.04□□□□□ -0.64
SHMT2-211ENST00000554310 EIF2B1Q14232 305 aaKnown RBP11.04□□□□□ -0.64
SHMT2-211ENST00000554310 TIGD6Q17RP2 521 aa11.04□□□□□ -0.64
SHMT2-211ENST00000554310 CR1LQ2VPA4 569 aa11.04□□□□□ -0.64
SHMT2-211ENST00000554310 SLC35D3Q5M8T2 416 aa11.04□□□□□ -0.64
SHMT2-211ENST00000554310 PGAP1Q75T13 922 aa11.04□□□□□ -0.64
SHMT2-211ENST00000554310 RHOUQ7L0Q8 258 aa11.04□□□□□ -0.64
SHMT2-211ENST00000554310 SHFQ7M4L6 423 aa11.04□□□□□ -0.64
SHMT2-211ENST00000554310 DPY19L4Q7Z388 723 aa11.04□□□□□ -0.64
SHMT2-211ENST00000554310 TIGD4Q8IY51 512 aa11.04□□□□□ -0.64
SHMT2-211ENST00000554310 ZNF454Q8N9F8 522 aa11.04□□□□□ -0.64
SHMT2-211ENST00000554310 BHLHE23Q8NDY6 225 aa11.04□□□□□ -0.64
SHMT2-211ENST00000554310 OR10AD1Q8NGE0 317 aa11.04□□□□□ -0.64
SHMT2-211ENST00000554310 TMEM163Q8TC26 289 aa11.04□□□□□ -0.64
SHMT2-211ENST00000554310 RNF133Q8WVZ7 376 aa11.04□□□□□ -0.64
SHMT2-211ENST00000554310 ITLN1Q8WWA0 313 aa11.04□□□□□ -0.64
SHMT2-211ENST00000554310 TMEM80Q96HE8 168 aa11.04□□□□□ -0.64
SHMT2-211ENST00000554310 OR2V2Q96R30 315 aa11.04□□□□□ -0.64
SHMT2-211ENST00000554310 GAL3ST1Q99999 423 aa11.04□□□□□ -0.64
SHMT2-211ENST00000554310 OR51V1Q9H2C8 321 aa11.04□□□□□ -0.64
SHMT2-211ENST00000554310 CENPMQ9NSP4 180 aa11.04□□□□□ -0.64
SHMT2-211ENST00000554310 MRPS18AQ9NVS2 196 aaKnown RBP11.04□□□□□ -0.64
SHMT2-211ENST00000554310 DNAJC27Q9NZQ0 273 aa11.04□□□□□ -0.64
SHMT2-211ENST00000554310 PPP1R3CQ9UQK1 317 aa11.04□□□□□ -0.64
SHMT2-211ENST00000554310 STAB1Q9NY15 2570 aa11.03□□□□□ -0.64
SHMT2-211ENST00000554310 ISPDA4D126 451 aa11.03□□□□□ -0.64
SHMT2-211ENST00000554310 SNTNA6NMZ2 147 aa11.03□□□□□ -0.64
SHMT2-211ENST00000554310 KIAA1324LA8MWY0 1029 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-211ENST00000554310 MLNRO43193 412 aa11.03□□□□□ -0.64
SHMT2-211ENST00000554310 XRCC2O43543 280 aa11.03□□□□□ -0.64
SHMT2-211ENST00000554310 IGHV2-5P01817 119 aa11.03□□□□□ -0.64
SHMT2-211ENST00000554310 CD36P16671 472 aa11.03□□□□□ -0.64
SHMT2-211ENST00000554310 ZNF182P17025 639 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms