RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 ACHEP22303 614 aa10.45□□□□□ -0.74
SHMT2-209ENST00000553949 ACKR3P25106 362 aa10.45□□□□□ -0.74
SHMT2-209ENST00000553949 LIPAP38571 399 aa10.45□□□□□ -0.74
SHMT2-209ENST00000553949 DDOSTP39656 456 aa10.45□□□□□ -0.74
SHMT2-209ENST00000553949 BDH1Q02338 343 aa10.45□□□□□ -0.74
SHMT2-209ENST00000553949 SLC3A1Q07837 685 aa10.45□□□□□ -0.74
SHMT2-209ENST00000553949 TNK1Q13470 666 aa10.45□□□□□ -0.74
SHMT2-209ENST00000553949 Q6ZSR3 168 aa10.45□□□□□ -0.74
SHMT2-209ENST00000553949 ZNF367Q7RTV3 350 aa10.45□□□□□ -0.74
SHMT2-209ENST00000553949 ZNF676Q8N7Q3 588 aa10.45□□□□□ -0.74
SHMT2-209ENST00000553949 SEMA6DQ8NFY4 1073 aa10.45□□□□□ -0.74
SHMT2-209ENST00000553949 TSPAN14Q8NG11 270 aa10.45□□□□□ -0.74
SHMT2-209ENST00000553949 OR8G5Q8NG78 346 aa10.45□□□□□ -0.74
SHMT2-209ENST00000553949 OR5AK2Q8NH90 309 aa10.45□□□□□ -0.74
SHMT2-209ENST00000553949 GTF3AQ92664 365 aaKnown RBP10.45□□□□□ -0.74
SHMT2-209ENST00000553949 ITFG2Q969R8 447 aa10.45□□□□□ -0.74
SHMT2-209ENST00000553949 SMIM19Q96E16 107 aa10.45□□□□□ -0.74
SHMT2-209ENST00000553949 LURAP1Q96LR2 239 aa10.45□□□□□ -0.74
SHMT2-209ENST00000553949 CACNG6Q9BXT2 260 aa10.45□□□□□ -0.74
SHMT2-209ENST00000553949 COMMD4Q9H0A8 199 aa10.45□□□□□ -0.74
SHMT2-209ENST00000553949 MSL2Q9HCI7 577 aa10.45□□□□□ -0.74
SHMT2-209ENST00000553949 MRPL15Q9P015 296 aaKnown RBP10.45□□□□□ -0.74
SHMT2-209ENST00000553949 EDARQ9UNE0 448 aa10.45□□□□□ -0.74
SHMT2-209ENST00000553949 UNC79Q9P2D8 2635 aa10.45□□□□□ -0.74
SHMT2-209ENST00000553949 RAI1Q7Z5J4 1906 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-209ENST00000553949 ASH1LQ9NR48 2969 aaKnown RBP10.44□□□□□ -0.74
SHMT2-209ENST00000553949 CENPEQ02224 2701 aa10.44□□□□□ -0.74
SHMT2-209ENST00000553949 PNMA8CA0A1B0GUJ8 204 aa10.44□□□□□ -0.74
SHMT2-209ENST00000553949 ZSCAN5BA6NJL1 495 aa10.44□□□□□ -0.74
SHMT2-209ENST00000553949 ANKRD30BLA7E2S9 258 aa10.44□□□□□ -0.74
SHMT2-209ENST00000553949 OVOL3O00110 214 aa10.44□□□□□ -0.74
SHMT2-209ENST00000553949 PLPP2O43688 288 aa10.44□□□□□ -0.74
SHMT2-209ENST00000553949 RPSAP08865 295 aaKnown RBP10.44□□□□□ -0.74
SHMT2-209ENST00000553949 HSMCR30P0CW71 290 aa10.44□□□□□ -0.74
SHMT2-209ENST00000553949 CD53P19397 219 aa10.44□□□□□ -0.74
SHMT2-209ENST00000553949 CELP19835 753 aa10.44□□□□□ -0.74
SHMT2-209ENST00000553949 MAP2K3P46734 347 aa10.44□□□□□ -0.74
SHMT2-209ENST00000553949 PPOXP50336 477 aa10.44□□□□□ -0.74
SHMT2-209ENST00000553949 ZNF81P51508 661 aa10.44□□□□□ -0.74
SHMT2-209ENST00000553949 RIPPLY1Q0D2K3 151 aa10.44□□□□□ -0.74
SHMT2-209ENST00000553949 ZMAT1Q5H9K5 638 aa10.44□□□□□ -0.74
SHMT2-209ENST00000553949 ZCCHC24Q8N2G6 241 aaKnown RBP10.44□□□□□ -0.74
SHMT2-209ENST00000553949 CCDC54Q8NEL0 328 aa10.44□□□□□ -0.74
SHMT2-209ENST00000553949 CSNK2A3Q8NEV1 391 aa10.44□□□□□ -0.74
SHMT2-209ENST00000553949 OR14K1Q8NGZ2 314 aa10.44□□□□□ -0.74
SHMT2-209ENST00000553949 OR10AC1Q8NH08 325 aa10.44□□□□□ -0.74
SHMT2-209ENST00000553949 GHSRQ92847 366 aa10.44□□□□□ -0.74
SHMT2-209ENST00000553949 PIGTQ969N2 578 aa10.44□□□□□ -0.74
SHMT2-209ENST00000553949 PGLYRP3Q96LB9 341 aa10.44□□□□□ -0.74
SHMT2-209ENST00000553949 SLC30A2Q9BRI3 323 aa10.44□□□□□ -0.74
SHMT2-209ENST00000553949 MS4A5Q9H3V2 200 aa10.44□□□□□ -0.74
SHMT2-209ENST00000553949 CXorf56Q9H5V9 222 aa10.44□□□□□ -0.74
SHMT2-209ENST00000553949 ISYNA1Q9NPH2 558 aa10.44□□□□□ -0.74
SHMT2-209ENST00000553949 TMEM100Q9NV29 134 aa10.44□□□□□ -0.74
SHMT2-209ENST00000553949 HHLA2Q9UM44 414 aa10.44□□□□□ -0.74
SHMT2-209ENST00000553949 PLEKHA6Q9Y2H5 1048 aa10.44□□□□□ -0.74
SHMT2-209ENST00000553949 PMF1-BGLAPU3KQ54 211 aa10.44□□□□□ -0.74
SHMT2-209ENST00000553949 V9GYS6 101 aa10.44□□□□□ -0.74
SHMT2-209ENST00000553949 A0A087WXM4 84 aa10.43□□□□□ -0.74
SHMT2-209ENST00000553949 DHRS7CA6NNS2 312 aa10.43□□□□□ -0.74
SHMT2-209ENST00000553949 C17orf100A8MU93 164 aa10.43□□□□□ -0.74
SHMT2-209ENST00000553949 H7C417 338 aa10.43□□□□□ -0.74
SHMT2-209ENST00000553949 SPRY3O43610 288 aa10.43□□□□□ -0.74
SHMT2-209ENST00000553949 CST4P01036 141 aa10.43□□□□□ -0.74
SHMT2-209ENST00000553949 CD1AP06126 327 aa10.43□□□□□ -0.74
SHMT2-209ENST00000553949 ZNF12P17014 697 aa10.43□□□□□ -0.74
SHMT2-209ENST00000553949 CDKN1AP38936 164 aa10.43□□□□□ -0.74
SHMT2-209ENST00000553949 MLLT11Q13015 90 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-209ENST00000553949 ZBTB37Q5TC79 503 aa10.43□□□□□ -0.74
SHMT2-209ENST00000553949 UBE2UQ5VVX9 321 aa10.43□□□□□ -0.74
SHMT2-209ENST00000553949 Q6ZR03 302 aa10.43□□□□□ -0.74
SHMT2-209ENST00000553949 FTMTQ8N4E7 242 aa10.43□□□□□ -0.74
SHMT2-209ENST00000553949 OR51A4Q8NGJ6 313 aa10.43□□□□□ -0.74
SHMT2-209ENST00000553949 OR13G1Q8NGZ3 307 aa10.43□□□□□ -0.74
SHMT2-209ENST00000553949 RGP1Q92546 391 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-209ENST00000553949 FCGR1BQ92637 280 aa10.43□□□□□ -0.74
SHMT2-209ENST00000553949 UFD1Q92890 307 aa10.43□□□□□ -0.74
SHMT2-209ENST00000553949 OPALINQ96PE5 141 aa10.43□□□□□ -0.74
SHMT2-209ENST00000553949 MGLLQ99685 303 aa10.43□□□□□ -0.74
SHMT2-209ENST00000553949 VRK1Q99986 396 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-209ENST00000553949 ENPP5Q9UJA9 477 aa10.43□□□□□ -0.74
SHMT2-209ENST00000553949 ZDHHC8Q9ULC8 765 aa10.43□□□□□ -0.74
SHMT2-209ENST00000553949 PIGLQ9Y2B2 252 aa10.43□□□□□ -0.74
SHMT2-209ENST00000553949 ZNF281Q9Y2X9 895 aa10.43□□□□□ -0.74
SHMT2-209ENST00000553949 RHBDD3Q9Y3P4 386 aa10.43□□□□□ -0.74
SHMT2-209ENST00000553949 LRBAP50851 2863 aa10.43□□□□□ -0.74
SHMT2-209ENST00000553949 ZNF816-ZNF321PA0A0X1KG74 233 aa10.42□□□□□ -0.74
SHMT2-209ENST00000553949 A0A1B0GWJ7 208 aa10.42□□□□□ -0.74
SHMT2-209ENST00000553949 A6NIN4 97 aa10.42□□□□□ -0.74
SHMT2-209ENST00000553949 LMX1BO60663 402 aa10.42□□□□□ -0.74
SHMT2-209ENST00000553949 IGHV1-46P01743 117 aa10.42□□□□□ -0.74
SHMT2-209ENST00000553949 HLA-DPB1P04440 258 aa10.42□□□□□ -0.74
SHMT2-209ENST00000553949 CPEP16870 476 aa10.42□□□□□ -0.74
SHMT2-209ENST00000553949 FAHP16930 419 aa10.42□□□□□ -0.74
SHMT2-209ENST00000553949 CA6P23280 308 aa10.42□□□□□ -0.74
SHMT2-209ENST00000553949 DNASE1P24855 282 aa10.42□□□□□ -0.74
SHMT2-209ENST00000553949 GPR50Q13585 617 aa10.42□□□□□ -0.74
SHMT2-209ENST00000553949 TPBGQ13641 420 aa10.42□□□□□ -0.74
SHMT2-209ENST00000553949 NEDD8Q15843 81 aa10.42□□□□□ -0.74
SHMT2-209ENST00000553949 PCGF3Q3KNV8 242 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms