RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 SPERTQ8NA61 448 aa7.09□□□□□ -1.27
PSEN1-209ENST00000553855 BHLHE23Q8NDY6 225 aa7.09□□□□□ -1.27
PSEN1-209ENST00000553855 BBS1Q8NFJ9 593 aa7.09□□□□□ -1.27
PSEN1-209ENST00000553855 ST7LQ8TDW4 575 aa7.09□□□□□ -1.27
PSEN1-209ENST00000553855 CCL17Q92583 94 aa7.09□□□□□ -1.27
PSEN1-209ENST00000553855 MRPL48Q96GC5 212 aaKnown RBP7.09□□□□□ -1.27
PSEN1-209ENST00000553855 SMR3AQ99954 134 aa7.09□□□□□ -1.27
PSEN1-209ENST00000553855 GABARAPL3Q9BY60 117 aa7.09□□□□□ -1.27
PSEN1-209ENST00000553855 VCXQ9H320 206 aa7.09□□□□□ -1.27
PSEN1-209ENST00000553855 RGCCQ9H4X1 137 aa7.09□□□□□ -1.27
PSEN1-209ENST00000553855 PNRC2Q9NPJ4 139 aaKnown RBP7.09□□□□□ -1.27
PSEN1-209ENST00000553855 C8orf4Q9NR00 106 aa7.09□□□□□ -1.27
PSEN1-209ENST00000553855 YAE1D1Q9NRH1 226 aa7.09□□□□□ -1.27
PSEN1-209ENST00000553855 ZNF275Q9NSD4 429 aaPredicted RBP7.09□□□□□ -1.27
PSEN1-209ENST00000553855 WARS2Q9UGM6 360 aaKnown RBP7.09□□□□□ -1.27
PSEN1-209ENST00000553855 IL19Q9UHD0 177 aa7.09□□□□□ -1.27
PSEN1-209ENST00000553855 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.09□□□□□ -1.27
PSEN1-209ENST00000553855 GMPPBQ9Y5P6 360 aa7.09□□□□□ -1.27
PSEN1-209ENST00000553855 ISPDA4D126 451 aa7.08□□□□□ -1.28
PSEN1-209ENST00000553855 VWC2LB2RUY7 222 aa7.08□□□□□ -1.28
PSEN1-209ENST00000553855 LYNX1G3V0Z9 82 aa7.08□□□□□ -1.28
PSEN1-209ENST00000553855 H3BNX3 289 aa7.08□□□□□ -1.28
PSEN1-209ENST00000553855 CD5LO43866 347 aa7.08□□□□□ -1.28
PSEN1-209ENST00000553855 NCR1O76036 304 aa7.08□□□□□ -1.28
PSEN1-209ENST00000553855 ALPLP05186 524 aa7.08□□□□□ -1.28
PSEN1-209ENST00000553855 CD55P08174 381 aa7.08□□□□□ -1.28
PSEN1-209ENST00000553855 LYNX1P0DP58 116 aa7.08□□□□□ -1.28
PSEN1-209ENST00000553855 SLC2A1P11166 492 aa7.08□□□□□ -1.28
PSEN1-209ENST00000553855 ANPEPP15144 967 aa7.08□□□□□ -1.28
PSEN1-209ENST00000553855 HNF1AP20823 631 aa7.08□□□□□ -1.28
PSEN1-209ENST00000553855 PCMT1P22061 227 aa7.08□□□□□ -1.28
PSEN1-209ENST00000553855 COL8A2P25067 703 aa7.08□□□□□ -1.28
PSEN1-209ENST00000553855 OPRL1P41146 370 aa7.08□□□□□ -1.28
PSEN1-209ENST00000553855 GK2Q14410 553 aaPredicted RBP7.08□□□□□ -1.28
PSEN1-209ENST00000553855 PDCD1Q15116 288 aa7.08□□□□□ -1.28
PSEN1-209ENST00000553855 OR8G1Q15617 311 aa7.08□□□□□ -1.28
PSEN1-209ENST00000553855 TRIP10Q15642 601 aa7.08□□□□□ -1.28
PSEN1-209ENST00000553855 KRTAP27-1Q3LI81 207 aa7.08□□□□□ -1.28
PSEN1-209ENST00000553855 ZIK1Q3SY52 487 aaPredicted RBP7.08□□□□□ -1.28
PSEN1-209ENST00000553855 MEDAGQ5VYS4 303 aa7.08□□□□□ -1.28
PSEN1-209ENST00000553855 DEGS2Q6QHC5 323 aa7.08□□□□□ -1.28
PSEN1-209ENST00000553855 Q71RC1 249 aaPredicted RBP7.08□□□□□ -1.28
PSEN1-209ENST00000553855 SLC35F2Q8IXU6 374 aa7.08□□□□□ -1.28
PSEN1-209ENST00000553855 C1orf87Q8N0U7 546 aa7.08□□□□□ -1.28
PSEN1-209ENST00000553855 OR51G2Q8NGK0 314 aa7.08□□□□□ -1.28
PSEN1-209ENST00000553855 OR10S1Q8NGN2 331 aa7.08□□□□□ -1.28
PSEN1-209ENST00000553855 OR11L1Q8NGX0 322 aa7.08□□□□□ -1.28
PSEN1-209ENST00000553855 OR8S1Q8NH09 359 aa7.08□□□□□ -1.28
PSEN1-209ENST00000553855 RAB39BQ96DA2 213 aa7.08□□□□□ -1.28
PSEN1-209ENST00000553855 Q96MT0 163 aa7.08□□□□□ -1.28
PSEN1-209ENST00000553855 POFUT1Q9H488 388 aa7.08□□□□□ -1.28
PSEN1-209ENST00000553855 ZNF391Q9UJN7 358 aa7.08□□□□□ -1.28
PSEN1-209ENST00000553855 KCNS2Q9ULS6 477 aa7.08□□□□□ -1.28
PSEN1-209ENST00000553855 GTF2A1LQ9UNN4 478 aa7.08□□□□□ -1.28
PSEN1-209ENST00000553855 PPP1R3CQ9UQK1 317 aa7.08□□□□□ -1.28
PSEN1-209ENST00000553855 PLCE1Q9P212 2302 aa7.08□□□□□ -1.28
PSEN1-209ENST00000553855 F8P00451 2351 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 IGHV4-61A0A0C4DH41 118 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 ACOD1A6NK06 481 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 ANXA2P2A6NMY6 339 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 CD300LBA8K4G0 201 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 A8MV72 311 aaPredicted RBP7.07□□□□□ -1.28
PSEN1-209ENST00000553855 M0R129 80 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 GMDSO60547 372 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 KRT8P05787 483 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 TACSTD2P09758 323 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 ALOX5APP20292 161 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 SLC2A5P22732 501 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 HTR1FP30939 366 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 OTX1P32242 354 aaPredicted RBP7.07□□□□□ -1.28
PSEN1-209ENST00000553855 ZNF121P58317 390 aaPredicted RBP7.07□□□□□ -1.28
PSEN1-209ENST00000553855 MVKQ03426 396 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 IKZF1Q13422 519 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 RIN1Q13671 783 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 RSPO1Q2MKA7 263 aaPredicted RBP7.07□□□□□ -1.28
PSEN1-209ENST00000553855 GLYATL3Q5SZD4 288 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 AADACL4Q5VUY2 407 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 FAM166AQ6J272 317 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 LRRN1Q6UXK5 716 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 FAM220AQ7Z4H9 259 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 NAA40Q86UY6 237 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 KLBQ86Z14 1044 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 ZNF679Q8IYX0 411 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 CSNK2A3Q8NEV1 391 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 OR2AE1Q8NHA4 323 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 ITLN1Q8WWA0 313 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 GTF3AQ92664 365 aaKnown RBP7.07□□□□□ -1.28
PSEN1-209ENST00000553855 ITFG2Q969R8 447 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 ERGIC1Q969X5 290 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 MISP3Q96FF7 219 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 REEP6Q96HR9 211 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 RDH12Q96NR8 316 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 HIST1H2AAQ96QV6 131 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 OR2V2Q96R30 315 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 GAL3ST1Q99999 423 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 APOL4Q9BPW4 351 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 SLC30A2Q9BRI3 323 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 NARFLQ9H6Q4 476 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 ABCB9Q9NP78 766 aa7.07□□□□□ -1.28
PSEN1-209ENST00000553855 CLN6Q9NWW5 311 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms