RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 ERGIC1Q969X5 290 aa17.12■□□□□ 0.33
FOXA1-203ENST00000553751 LYZL4Q96KX0 146 aa17.12■□□□□ 0.33
FOXA1-203ENST00000553751 MBOAT4Q96T53 435 aa17.12■□□□□ 0.33
FOXA1-203ENST00000553751 C9orf16Q9BUW7 83 aa17.12■□□□□ 0.33
FOXA1-203ENST00000553751 LRRC30A6NM36 301 aa17.11■□□□□ 0.33
FOXA1-203ENST00000553751 ANKRD30BLA7E2S9 258 aa17.11■□□□□ 0.33
FOXA1-203ENST00000553751 KIAA1324LA8MWY0 1029 aaPredicted RBP17.11■□□□□ 0.33
FOXA1-203ENST00000553751 PHYHO14832 338 aa17.11■□□□□ 0.33
FOXA1-203ENST00000553751 PLPP2O43688 288 aa17.11■□□□□ 0.33
FOXA1-203ENST00000553751 ZNF254O75437 659 aa17.11■□□□□ 0.33
FOXA1-203ENST00000553751 ANPEPP15144 967 aa17.11■□□□□ 0.33
FOXA1-203ENST00000553751 HNF1AP20823 631 aa17.11■□□□□ 0.33
FOXA1-203ENST00000553751 DCTDP32321 178 aa17.11■□□□□ 0.33
FOXA1-203ENST00000553751 MDH2P40926 338 aaKnown RBP17.11■□□□□ 0.33
FOXA1-203ENST00000553751 SPERTQ8NA61 448 aa17.11■□□□□ 0.33
FOXA1-203ENST00000553751 EME1Q96AY2 570 aa17.11■□□□□ 0.33
FOXA1-203ENST00000553751 SLC29A1Q99808 456 aa17.11■□□□□ 0.33
FOXA1-203ENST00000553751 UFSP2Q9NUQ7 469 aa17.11■□□□□ 0.33
FOXA1-203ENST00000553751 ZNF391Q9UJN7 358 aa17.11■□□□□ 0.33
FOXA1-203ENST00000553751 IKZF2Q9UKS7 526 aa17.11■□□□□ 0.33
FOXA1-203ENST00000553751 MXRA5Q9NR99 2828 aa17.1■□□□□ 0.33
FOXA1-203ENST00000553751 TRAV20A0A0B4J274 112 aa17.1■□□□□ 0.33
FOXA1-203ENST00000553751 TMEM269A0A1B0GVZ9 245 aa17.1■□□□□ 0.33
FOXA1-203ENST00000553751 ACOD1A6NK06 481 aa17.1■□□□□ 0.33
FOXA1-203ENST00000553751 FAM20BO75063 409 aa17.1■□□□□ 0.33
FOXA1-203ENST00000553751 ZNF205O95201 554 aa17.1■□□□□ 0.33
FOXA1-203ENST00000553751 PCMT1P22061 227 aa17.1■□□□□ 0.33
FOXA1-203ENST00000553751 ACKR3P25106 362 aa17.1■□□□□ 0.33
FOXA1-203ENST00000553751 RIDAP52758 137 aaKnown RBP17.1■□□□□ 0.33
FOXA1-203ENST00000553751 POU4F2Q12837 409 aa17.1■□□□□ 0.33
FOXA1-203ENST00000553751 C1orf87Q8N0U7 546 aa17.1■□□□□ 0.33
FOXA1-203ENST00000553751 MUC20Q8N307 709 aaPredicted RBP17.1■□□□□ 0.33
FOXA1-203ENST00000553751 KLHL36Q8N4N3 616 aa17.1■□□□□ 0.33
FOXA1-203ENST00000553751 TRUB1Q8WWH5 349 aaKnown RBP17.1■□□□□ 0.33
FOXA1-203ENST00000553751 UBE2FQ969M7 185 aa17.1■□□□□ 0.33
FOXA1-203ENST00000553751 PPP1R3EQ9H7J1 279 aa17.1■□□□□ 0.33
FOXA1-203ENST00000553751 PATZ1Q9HBE1 687 aaKnown RBP17.1■□□□□ 0.33
FOXA1-203ENST00000553751 G6PC2Q9NQR9 355 aa17.1■□□□□ 0.33
FOXA1-203ENST00000553751 IMPAD1Q9NX62 359 aa17.1■□□□□ 0.33
FOXA1-203ENST00000553751 RHBDD3Q9Y3P4 386 aa17.1■□□□□ 0.33
FOXA1-203ENST00000553751 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.09■□□□□ 0.33
FOXA1-203ENST00000553751 ZNF670-ZNF695F2Z2N8 137 aa17.09■□□□□ 0.33
FOXA1-203ENST00000553751 F5H0A9 414 aaPredicted RBP17.09■□□□□ 0.33
FOXA1-203ENST00000553751 MAGEB4O15481 346 aaPredicted RBP17.09■□□□□ 0.33
FOXA1-203ENST00000553751 SRSF10O75494 262 aaKnown RBP17.09■□□□□ 0.33
FOXA1-203ENST00000553751 APOL3O95236 402 aa17.09■□□□□ 0.33
FOXA1-203ENST00000553751 FSTL3O95633 263 aa17.09■□□□□ 0.33
FOXA1-203ENST00000553751 SRD5A1P18405 259 aa17.09■□□□□ 0.33
FOXA1-203ENST00000553751 MFGE8Q08431 387 aaPredicted RBP17.09■□□□□ 0.33
FOXA1-203ENST00000553751 TMED1Q13445 227 aa17.09■□□□□ 0.33
FOXA1-203ENST00000553751 ZNF829Q3KNS6 432 aaPredicted RBP17.09■□□□□ 0.33
FOXA1-203ENST00000553751 FAM201AQ5SY85 155 aa17.09■□□□□ 0.33
FOXA1-203ENST00000553751 SSX6Q7RTT6 188 aa17.09■□□□□ 0.33
FOXA1-203ENST00000553751 PLPP7Q8NBV4 271 aa17.09■□□□□ 0.33
FOXA1-203ENST00000553751 CSNK2A3Q8NEV1 391 aa17.09■□□□□ 0.33
FOXA1-203ENST00000553751 OR11L1Q8NGX0 322 aa17.09■□□□□ 0.33
FOXA1-203ENST00000553751 STMN2Q93045 179 aa17.09■□□□□ 0.33
FOXA1-203ENST00000553751 RFKQ969G6 155 aa17.09■□□□□ 0.33
FOXA1-203ENST00000553751 APOL4Q9BPW4 351 aa17.09■□□□□ 0.33
FOXA1-203ENST00000553751 PAPOLGQ9BWT3 736 aaKnown RBP17.09■□□□□ 0.33
FOXA1-203ENST00000553751 PBOV1Q9GZY1 135 aa17.09■□□□□ 0.33
FOXA1-203ENST00000553751 FN3KRPQ9HA64 309 aa17.09■□□□□ 0.33
FOXA1-203ENST00000553751 TMEM165Q9HC07 324 aa17.09■□□□□ 0.33
FOXA1-203ENST00000553751 MRM2Q9UI43 246 aaKnown RBP17.09■□□□□ 0.33
FOXA1-203ENST00000553751 PCDHB10Q9UN67 800 aa17.09■□□□□ 0.33
FOXA1-203ENST00000553751 A0A0U1RQV5 110 aa17.08■□□□□ 0.32
FOXA1-203ENST00000553751 CEACAM18A8MTB9 384 aa17.08■□□□□ 0.32
FOXA1-203ENST00000553751 PNPP00491 289 aa17.08■□□□□ 0.32
FOXA1-203ENST00000553751 IRF2P14316 349 aa17.08■□□□□ 0.32
FOXA1-203ENST00000553751 SEC61A1P61619 476 aaKnown RBP17.08■□□□□ 0.32
FOXA1-203ENST00000553751 SNRPGP62308 76 aaKnown RBP17.08■□□□□ 0.32
FOXA1-203ENST00000553751 HOXA4Q00056 320 aaPredicted RBP17.08■□□□□ 0.32
FOXA1-203ENST00000553751 EGR3Q06889 387 aa17.08■□□□□ 0.32
FOXA1-203ENST00000553751 SLC25A30Q5SVS4 291 aa17.08■□□□□ 0.32
FOXA1-203ENST00000553751 ZBTB49Q6ZSB9 765 aa17.08■□□□□ 0.32
FOXA1-203ENST00000553751 WDR86Q86TI4 376 aa17.08■□□□□ 0.32
FOXA1-203ENST00000553751 FTMTQ8N4E7 242 aa17.08■□□□□ 0.32
FOXA1-203ENST00000553751 OR8S1Q8NH09 359 aa17.08■□□□□ 0.32
FOXA1-203ENST00000553751 TBX5Q99593 518 aa17.08■□□□□ 0.32
FOXA1-203ENST00000553751 C14orf119Q9NWQ9 140 aa17.08■□□□□ 0.32
FOXA1-203ENST00000553751 NUFIP1Q9UHK0 495 aaKnown RBP17.08■□□□□ 0.32
FOXA1-203ENST00000553751 PPIAL4EA0A075B759 164 aa17.07■□□□□ 0.32
FOXA1-203ENST00000553751 A0A1W2PQL4 384 aaPredicted RBP17.07■□□□□ 0.32
FOXA1-203ENST00000553751 PPIAL4DF5H284 164 aa17.07■□□□□ 0.32
FOXA1-203ENST00000553751 ENTPD6O75354 484 aa17.07■□□□□ 0.32
FOXA1-203ENST00000553751 BAG2O95816 211 aa17.07■□□□□ 0.32
FOXA1-203ENST00000553751 IGLV3-1P01715 115 aa17.07■□□□□ 0.32
FOXA1-203ENST00000553751 PPIAL4FP0DN26 164 aa17.07■□□□□ 0.32
FOXA1-203ENST00000553751 ZFP36P26651 326 aaKnown RBP17.07■□□□□ 0.32
FOXA1-203ENST00000553751 GNALP38405 381 aa17.07■□□□□ 0.32
FOXA1-203ENST00000553751 LCN2P80188 198 aa17.07■□□□□ 0.32
FOXA1-203ENST00000553751 MZT1Q08AG7 82 aa17.07■□□□□ 0.32
FOXA1-203ENST00000553751 SNCBQ16143 134 aa17.07■□□□□ 0.32
FOXA1-203ENST00000553751 ZSCAN26Q16670 478 aa17.07■□□□□ 0.32
FOXA1-203ENST00000553751 ZNF404Q494X3 552 aa17.07■□□□□ 0.32
FOXA1-203ENST00000553751 PLEKHG7Q6ZR37 379 aa17.07■□□□□ 0.32
FOXA1-203ENST00000553751 ITPKCQ96DU7 683 aa17.07■□□□□ 0.32
FOXA1-203ENST00000553751 C1orf123Q9NWV4 160 aa17.07■□□□□ 0.32
FOXA1-203ENST00000553751 RNF7Q9UBF6 113 aa17.07■□□□□ 0.32
FOXA1-203ENST00000553751 PPIAL4AQ9Y536 164 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms